RNA–Protein interactions for RNA: ENST00000541645.1

UBC-210, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-210ENST00000541645 TLR2O60603 784 aa21.3■■□□□ 1
UBC-210ENST00000541645 FGRP09769 529 aa21.3■■□□□ 1
UBC-210ENST00000541645 USP14P54578 494 aa21.3■■□□□ 1
UBC-210ENST00000541645 SKAP1Q86WV1 359 aa21.3■■□□□ 1
UBC-210ENST00000541645 C12orf42Q96LP6 360 aa21.3■■□□□ 1
UBC-210ENST00000541645 KANSL2Q9H9L4 492 aa21.3■■□□□ 1
UBC-210ENST00000541645 TMOD4Q9NZQ9 345 aa21.3■■□□□ 1
UBC-210ENST00000541645 PHIPQ8WWQ0 1821 aa21.29■■□□□ 1
UBC-210ENST00000541645 PABPC4Q13310 644 aaKnown RBP eCLIP21.29■■□□□ 1
UBC-210ENST00000541645 USP17L2Q6R6M4 530 aa21.29■■□□□ 1
UBC-210ENST00000541645 ZNF444Q8N0Y2 327 aaPredicted RBP21.29■■□□□ 1
UBC-210ENST00000541645 PARK7Q99497 189 aaKnown RBP21.29■■□□□ 1
UBC-210ENST00000541645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.29■■□□□ 1
UBC-210ENST00000541645 SGSM2O43147 1006 aa21.28■■□□□ 1
UBC-210ENST00000541645 HOXA7P31268 230 aaPredicted RBP21.28■■□□□ 1
UBC-210ENST00000541645 TREML2Q5T2D2 321 aa21.28■■□□□ 1
UBC-210ENST00000541645 SIAH1Q8IUQ4 282 aa21.28■■□□□ 1
UBC-210ENST00000541645 ACER1Q8TDN7 264 aa21.28■■□□□ 1
UBC-210ENST00000541645 ZNF296Q8WUU4 475 aaPredicted RBP21.28■■□□□ 1
UBC-210ENST00000541645 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.28■■□□□ 1
UBC-210ENST00000541645 IL25Q9H293 177 aa21.28■■□□□ 1
UBC-210ENST00000541645 EMILIN3Q9NT22 766 aa21.28■■□□□ 1
UBC-210ENST00000541645 ORC4O43929 436 aa21.27■■□□□ 1
UBC-210ENST00000541645 FKTNO75072 461 aa21.27■■□□□ 1
UBC-210ENST00000541645 PCP11498 1178 aaKnown RBP21.27■■□□□ 1
UBC-210ENST00000541645 ICA1Q05084 483 aa21.27■■□□□ 1
UBC-210ENST00000541645 STK11IPQ8N1F8 1099 aa21.27■■□□□ 1
UBC-210ENST00000541645 FEZ1Q99689 392 aa21.27■■□□□ 1
UBC-210ENST00000541645 SH2D4AQ9H788 454 aa21.27■■□□□ 1
UBC-210ENST00000541645 ARHGEF10LQ9HCE6 1279 aa21.27■■□□□ 1
UBC-210ENST00000541645 CTNNA3Q9UI47 895 aa21.27■■□□□ 1
UBC-210ENST00000541645 PNMA3Q9UL41 463 aa21.27■■□□□ 1
UBC-210ENST00000541645 ATAD5Q96QE3 1844 aa21.27■□□□□ 0.99
UBC-210ENST00000541645 A0A1W2PRG0 241 aa21.26■□□□□ 0.99
UBC-210ENST00000541645 PRDM1O75626 825 aa21.26■□□□□ 0.99
UBC-210ENST00000541645 CTDSPL2Q05D32 466 aa21.26■□□□□ 0.99
UBC-210ENST00000541645 COL13A1Q5TAT6 717 aaPredicted RBP21.26■□□□□ 0.99
UBC-210ENST00000541645 NEDD1Q8NHV4 660 aa21.26■□□□□ 0.99
UBC-210ENST00000541645 TMX2Q9Y320 296 aa21.26■□□□□ 0.99
UBC-210ENST00000541645 ADGRA2Q96PE1 1338 aa21.26■□□□□ 0.99
UBC-210ENST00000541645 PLIN4Q96Q06 1357 aa21.25■□□□□ 0.99
UBC-210ENST00000541645 IGKV6D-41A0A0C4DH26 115 aa21.25■□□□□ 0.99
UBC-210ENST00000541645 ZNF213O14771 459 aa21.25■□□□□ 0.99
UBC-210ENST00000541645 NT5C2P49902 561 aa21.25■□□□□ 0.99
UBC-210ENST00000541645 DGKZQ13574 1117 aa21.25■□□□□ 0.99
UBC-210ENST00000541645 C17orf99Q6UX52 265 aa21.25■□□□□ 0.99
UBC-210ENST00000541645 NYAP2Q9P242 653 aa21.25■□□□□ 0.99
UBC-210ENST00000541645 TSPY3P0CV98 308 aa21.24■□□□□ 0.99
UBC-210ENST00000541645 TSPY8P0CW00 308 aa21.24■□□□□ 0.99
UBC-210ENST00000541645 CYP2C8P10632 490 aa21.24■□□□□ 0.99
UBC-210ENST00000541645 OSBPP22059 807 aa21.24■□□□□ 0.99
UBC-210ENST00000541645 SP3Q02447 781 aa21.24■□□□□ 0.99
UBC-210ENST00000541645 STAG1Q8WVM7 1258 aa21.24■□□□□ 0.99
UBC-210ENST00000541645 LPAR1Q92633 364 aa21.24■□□□□ 0.99
UBC-210ENST00000541645 RNF41Q9H4P4 317 aaPredicted RBP21.24■□□□□ 0.99
UBC-210ENST00000541645 SYNPO2Q9UMS6 1093 aa21.24■□□□□ 0.99
UBC-210ENST00000541645 EEF2P13639 858 aaKnown RBP21.23■□□□□ 0.99
UBC-210ENST00000541645 TFAP4Q01664 338 aa21.23■□□□□ 0.99
UBC-210ENST00000541645 PPP4R3BQ5MIZ7 849 aa21.23■□□□□ 0.99
UBC-210ENST00000541645 AKNAD1Q5T1N1 836 aa21.23■□□□□ 0.99
UBC-210ENST00000541645 NBPF3Q9H094 633 aa21.23■□□□□ 0.99
UBC-210ENST00000541645 ASCC2Q9H1I8 757 aaPredicted RBP21.23■□□□□ 0.99
UBC-210ENST00000541645 TACC3Q9Y6A5 838 aa21.23■□□□□ 0.99
UBC-210ENST00000541645 PTPRFP10586 1907 aa21.22■□□□□ 0.99
UBC-210ENST00000541645 BCRP11274 1271 aa21.22■□□□□ 0.99
UBC-210ENST00000541645 VCAM1P19320 739 aa21.22■□□□□ 0.99
UBC-210ENST00000541645 IMMTQ16891 758 aaKnown RBP21.22■□□□□ 0.99
UBC-210ENST00000541645 MFSD6Q6ZSS7 791 aa21.22■□□□□ 0.99
UBC-210ENST00000541645 CLEC10AQ8IUN9 316 aa21.22■□□□□ 0.99
UBC-210ENST00000541645 SMCR8Q8TEV9 937 aaPredicted RBP21.22■□□□□ 0.99
UBC-210ENST00000541645 MKL1Q969V6 931 aa21.22■□□□□ 0.99
UBC-210ENST00000541645 ERO1AQ96HE7 468 aa21.22■□□□□ 0.99
UBC-210ENST00000541645 MTMR4Q9NYA4 1195 aa21.22■□□□□ 0.99
UBC-210ENST00000541645 LOC285556D6RIA3 1793 aa21.22■□□□□ 0.99
UBC-210ENST00000541645 USP17L15C9J2P7 530 aa21.21■□□□□ 0.99
UBC-210ENST00000541645 USP17L13C9JLJ4 530 aa21.21■□□□□ 0.99
UBC-210ENST00000541645 USP17L11C9JVI0 530 aa21.21■□□□□ 0.99
UBC-210ENST00000541645 USP17L18D6R9N7 530 aa21.21■□□□□ 0.99
UBC-210ENST00000541645 USP17L22D6RA61 530 aa21.21■□□□□ 0.99
UBC-210ENST00000541645 USP17L17D6RBQ6 530 aa21.21■□□□□ 0.99
UBC-210ENST00000541645 USP17L19D6RCP7 530 aa21.21■□□□□ 0.99
UBC-210ENST00000541645 USP17L20D6RJB6 530 aa21.21■□□□□ 0.99
UBC-210ENST00000541645 GCLCP48506 637 aaPredicted RBP21.21■□□□□ 0.99
UBC-210ENST00000541645 HAND2P61296 217 aa21.21■□□□□ 0.99
UBC-210ENST00000541645 USP17L24Q0WX57 530 aa21.21■□□□□ 0.99
UBC-210ENST00000541645 ZYXQ15942 572 aaKnown RBP21.21■□□□□ 0.99
UBC-210ENST00000541645 FAM47AQ5JRC9 791 aa21.21■□□□□ 0.99
UBC-210ENST00000541645 CEP95Q96GE4 821 aa21.21■□□□□ 0.99
UBC-210ENST00000541645 ESYT1Q9BSJ8 1104 aa21.21■□□□□ 0.99
UBC-210ENST00000541645 VCPKMTQ9H867 229 aa21.21■□□□□ 0.99
UBC-210ENST00000541645 INCENPQ9NQS7 918 aa21.21■□□□□ 0.99
UBC-210ENST00000541645 TSPY2A6NKD2 308 aa21.2■□□□□ 0.98
UBC-210ENST00000541645 CDC45O75419 566 aa21.2■□□□□ 0.98
UBC-210ENST00000541645 TTLL1O95922 423 aa21.2■□□□□ 0.98
UBC-210ENST00000541645 IRX3P78415 501 aaPredicted RBP21.2■□□□□ 0.98
UBC-210ENST00000541645 CASC1Q6TDU7 716 aa21.2■□□□□ 0.98
UBC-210ENST00000541645 CATSPERGQ6ZRH7 1159 aa21.2■□□□□ 0.98
UBC-210ENST00000541645 CTU1Q7Z7A3 348 aaKnown RBP21.2■□□□□ 0.98
UBC-210ENST00000541645 TBC1D10CQ8IV04 446 aa21.2■□□□□ 0.98
UBC-210ENST00000541645 GTF3C2Q8WUA4 911 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms