RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 FOXP4Q8IVH2 680 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-204ENST00000537068 ZSCAN29Q8IWY8 852 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-204ENST00000537068 SMCR8Q8TEV9 937 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-204ENST00000537068 COA7Q96BR5 231 aa6.47□□□□□ -1.37
SNHG1-204ENST00000537068 ZNF512BQ96KM6 892 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-204ENST00000537068 DEFB118Q96PH6 123 aa6.47□□□□□ -1.37
SNHG1-204ENST00000537068 GDF15Q99988 308 aa6.47□□□□□ -1.37
SNHG1-204ENST00000537068 ASCC2Q9H1I8 757 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-204ENST00000537068 DHX36Q9H2U1 1008 aaKnown RBP6.47□□□□□ -1.37
SNHG1-204ENST00000537068 GPR108Q9NPR9 543 aa6.47□□□□□ -1.37
SNHG1-204ENST00000537068 GINM1Q9NU53 330 aa6.47□□□□□ -1.37
SNHG1-204ENST00000537068 PNMA3Q9UL41 463 aa6.47□□□□□ -1.37
SNHG1-204ENST00000537068 CEP290O15078 2479 aa6.47□□□□□ -1.37
SNHG1-204ENST00000537068 RLFQ13129 1914 aa6.46□□□□□ -1.37
SNHG1-204ENST00000537068 TRIOBPQ9H2D6 2365 aa6.46□□□□□ -1.37
SNHG1-204ENST00000537068 FAM196BA6NMK8 535 aa6.46□□□□□ -1.38
SNHG1-204ENST00000537068 C19orf81C9J6K1 198 aa6.46□□□□□ -1.38
SNHG1-204ENST00000537068 TFRCP02786 760 aaKnown RBP6.46□□□□□ -1.38
SNHG1-204ENST00000537068 HMGCRP04035 888 aa6.46□□□□□ -1.38
SNHG1-204ENST00000537068 UQCRFS1P1P0C7P4 283 aa6.46□□□□□ -1.38
SNHG1-204ENST00000537068 XRCC5P13010 732 aaKnown RBP6.46□□□□□ -1.38
SNHG1-204ENST00000537068 TRIM27P14373 513 aa6.46□□□□□ -1.38
SNHG1-204ENST00000537068 HMGCS2P54868 508 aa6.46□□□□□ -1.38
SNHG1-204ENST00000537068 BACE1P56817 501 aa6.46□□□□□ -1.38
SNHG1-204ENST00000537068 PABPC4Q13310 644 aaKnown RBP eCLIP6.46□□□□□ -1.38
SNHG1-204ENST00000537068 GPR153Q6NV75 609 aa6.46□□□□□ -1.38
SNHG1-204ENST00000537068 POTEEQ6S8J3 1075 aa6.46□□□□□ -1.38
SNHG1-204ENST00000537068 USP6NLQ92738 828 aa6.46□□□□□ -1.38
SNHG1-204ENST00000537068 PAWRQ96IZ0 340 aaKnown RBP6.46□□□□□ -1.38
SNHG1-204ENST00000537068 NEUROD6Q96NK8 337 aa6.46□□□□□ -1.38
SNHG1-204ENST00000537068 DNAJC18Q9H819 358 aa6.46□□□□□ -1.38
SNHG1-204ENST00000537068 PI4KBQ9UBF8 816 aa6.46□□□□□ -1.38
SNHG1-204ENST00000537068 OGDHLQ9ULD0 1010 aa6.46□□□□□ -1.38
SNHG1-204ENST00000537068 ZNFX1Q9P2E3 1918 aaKnown RBP6.46□□□□□ -1.38
SNHG1-204ENST00000537068 RANBP2P49792 3224 aaKnown RBP6.46□□□□□ -1.38
SNHG1-204ENST00000537068 SOX1O00570 391 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-204ENST00000537068 MAP3K7O43318 606 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 IGHA2P01877 340 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 GNAI2P04899 355 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 CYP2E1P05181 493 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-204ENST00000537068 ASNSP08243 561 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 Q3C1V9 767 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 ATF7IPQ6VMQ6 1270 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 NECAB2Q7Z6G3 386 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 ADGRA1Q86SQ6 560 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 PARP9Q8IXQ6 854 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 SSH3Q8TE77 659 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 SH3RF3Q8TEJ3 882 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-204ENST00000537068 DIS3LQ8TF46 1054 aaKnown RBP6.45□□□□□ -1.38
SNHG1-204ENST00000537068 TRIB2Q92519 343 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 P2RX7Q99572 595 aaKnown RBP6.45□□□□□ -1.38
SNHG1-204ENST00000537068 FAM117AQ9C073 453 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.45□□□□□ -1.381e-6■■□□□ 14.4
SNHG1-204ENST00000537068 AS3MTQ9HBK9 375 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 HMX1Q9NP08 348 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-204ENST00000537068 RBPJLQ9UBG7 517 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 TNNQ9UQP3 1299 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 PCDHGA4Q9Y5G9 962 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 PARP14Q460N5 1801 aa6.45□□□□□ -1.38
SNHG1-204ENST00000537068 USP17L10C9JJH3 530 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 CCER2I3L3R5 266 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 IPO8O15397 1037 aaKnown RBP6.44□□□□□ -1.38
SNHG1-204ENST00000537068 BAG3O95817 575 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 COL6A1P12109 1028 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 ATP8B2P98198 1209 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 TRIM32Q13049 653 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 G3BP1Q13283 466 aaKnown RBP eCLIP6.44□□□□□ -1.38
SNHG1-204ENST00000537068 TSR1Q2NL82 804 aaKnown RBP6.44□□□□□ -1.38
SNHG1-204ENST00000537068 LRIT3Q3SXY7 679 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 TNNI3KQ59H18 835 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 MORN1Q5T089 497 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 NAA16Q6N069 864 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-204ENST00000537068 TATDN1Q6P1N9 297 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 TEX11Q8IYF3 940 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 C12orf42Q96LP6 360 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 NBPF3Q9H094 633 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 TXNRD2Q9NNW7 524 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 AATFQ9NY61 560 aaKnown RBP eCLIP6.44□□□□□ -1.381e-323■■■□□ 16.4
SNHG1-204ENST00000537068 RAI14Q9P0K7 980 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 LRP2BPQ9P2M1 347 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 STAP2Q9UGK3 403 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 NOP58Q9Y2X3 529 aaKnown RBP6.44□□□□□ -1.38
SNHG1-204ENST00000537068 PCDHGA10Q9Y5H3 936 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 FPGT-TNNI3KV9GXZ4 949 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 FLT1P17948 1338 aa6.44□□□□□ -1.38
SNHG1-204ENST00000537068 ZNF236Q9UL36 1845 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 MYH8P13535 1937 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 A0A0G2JMZ2 1700 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 BCAR3O75815 825 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 MAPK4P31152 587 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 HERVK_113P62684 666 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 CACNB2Q08289 660 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-204ENST00000537068 MTMR2Q13614 643 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 AMHR2Q16671 573 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 CCDC158Q5M9N0 1113 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 GORABQ5T7V8 394 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 TMED8Q6PL24 325 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-204ENST00000537068 LBX2Q6XYB7 198 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 TRMT44Q8IYL2 757 aaKnown RBP6.43□□□□□ -1.38
SNHG1-204ENST00000537068 GPRC5AQ8NFJ5 357 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms