RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ARMC5Q96C12 935 aa14.52□□□□□ -0.09
TRAPPC4-209ENST00000528230 DYNLL2Q96FJ2 89 aa14.52□□□□□ -0.09
TRAPPC4-209ENST00000528230 KIAA1683Q9H0B3 1180 aa14.52□□□□□ -0.09
TRAPPC4-209ENST00000528230 ASCC2Q9H1I8 757 aaPredicted RBP14.52□□□□□ -0.09
TRAPPC4-209ENST00000528230 EMILIN3Q9NT22 766 aa14.52□□□□□ -0.09
TRAPPC4-209ENST00000528230 FMNL1O95466 1100 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC4-209ENST00000528230 CTGFP29279 349 aa14.51□□□□□ -0.09
TRAPPC4-209ENST00000528230 FCGRTP55899 365 aa14.51□□□□□ -0.09
TRAPPC4-209ENST00000528230 FAM110CQ1W6H9 321 aa14.51□□□□□ -0.09
TRAPPC4-209ENST00000528230 B4GALNT3Q6L9W6 998 aa14.51□□□□□ -0.09
TRAPPC4-209ENST00000528230 TRIM47Q96LD4 638 aa14.51□□□□□ -0.09
TRAPPC4-209ENST00000528230 OSBPL3Q9H4L5 887 aa14.51□□□□□ -0.09
TRAPPC4-209ENST00000528230 SRRDQ9UH36 339 aa14.51□□□□□ -0.09
TRAPPC4-209ENST00000528230 DOCK3Q8IZD9 2030 aa14.5□□□□□ -0.09
TRAPPC4-209ENST00000528230 CYP2D7A0A087X1C5 515 aa14.5□□□□□ -0.09
TRAPPC4-209ENST00000528230 M0R2C6 588 aa14.5□□□□□ -0.09
TRAPPC4-209ENST00000528230 MPHOSPH10O00566 681 aaKnown RBP14.5□□□□□ -0.09
TRAPPC4-209ENST00000528230 IRX3P78415 501 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC4-209ENST00000528230 SEPT2Q15019 361 aa14.5□□□□□ -0.09
TRAPPC4-209ENST00000528230 NBPF11Q86T75 865 aa14.5□□□□□ -0.09
TRAPPC4-209ENST00000528230 ANKRD13CQ8N6S4 541 aa14.5□□□□□ -0.09
TRAPPC4-209ENST00000528230 SLC44A5Q8NCS7 719 aa14.5□□□□□ -0.09
TRAPPC4-209ENST00000528230 GTF3C2Q8WUA4 911 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC4-209ENST00000528230 FEZ1Q99689 392 aa14.5□□□□□ -0.09
TRAPPC4-209ENST00000528230 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
TRAPPC4-209ENST00000528230 PTCH2Q9Y6C5 1203 aa14.5□□□□□ -0.09
TRAPPC4-209ENST00000528230 USP17L15C9J2P7 530 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 USP17L13C9JLJ4 530 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 USP17L11C9JVI0 530 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 USP17L18D6R9N7 530 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 USP17L22D6RA61 530 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 USP17L17D6RBQ6 530 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 USP17L19D6RCP7 530 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 USP17L20D6RJB6 530 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 APPP05067 770 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 USP17L24Q0WX57 530 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 PLEKHM2Q8IWE5 1019 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 IFNL3Q8IZI9 196 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 ACER1Q8TDN7 264 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 SEC62Q99442 399 aaKnown RBP14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 P2RX7Q99572 595 aaKnown RBP14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 NACAP1Q9BZK3 213 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 HELLSQ9NRZ9 838 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 MORF4L1Q9UBU8 362 aa14.49□□□□□ -0.09
TRAPPC4-209ENST00000528230 ROBO3Q96MS0 1386 aa14.48□□□□□ -0.09
TRAPPC4-209ENST00000528230 MINDY4BA8MYZ0 360 aa14.48□□□□□ -0.09
TRAPPC4-209ENST00000528230 SMIM22K7EJ46 135 aa14.48□□□□□ -0.09
TRAPPC4-209ENST00000528230 AKR1B1P15121 316 aa14.48□□□□□ -0.09
TRAPPC4-209ENST00000528230 TDO2P48775 406 aa14.48□□□□□ -0.09
TRAPPC4-209ENST00000528230 HERVK_113P62684 666 aa14.48□□□□□ -0.09
TRAPPC4-209ENST00000528230 SLC9C1Q4G0N8 1177 aa14.48□□□□□ -0.09
TRAPPC4-209ENST00000528230 CATSPERGQ6ZRH7 1159 aa14.48□□□□□ -0.09
TRAPPC4-209ENST00000528230 ZNF287Q9HBT7 754 aa14.48□□□□□ -0.09
TRAPPC4-209ENST00000528230 EPB41L4AQ9HCS5 686 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC4-209ENST00000528230 RBBP6Q7Z6E9 1792 aaKnown RBP14.47□□□□□ -0.09
TRAPPC4-209ENST00000528230 MYPNQ86TC9 1320 aa14.47□□□□□ -0.09
TRAPPC4-209ENST00000528230 A0A1W2PRG0 241 aa14.47□□□□□ -0.09
TRAPPC4-209ENST00000528230 SOX10P56693 466 aa14.47□□□□□ -0.09
TRAPPC4-209ENST00000528230 MLLT1Q03111 559 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC4-209ENST00000528230 ZYXQ15942 572 aaKnown RBP14.47□□□□□ -0.09
TRAPPC4-209ENST00000528230 SIAH1Q8IUQ4 282 aa14.47□□□□□ -0.09
TRAPPC4-209ENST00000528230 COA7Q96BR5 231 aa14.47□□□□□ -0.09
TRAPPC4-209ENST00000528230 ZNF333Q96JL9 665 aa14.47□□□□□ -0.09
TRAPPC4-209ENST00000528230 SH2D4AQ9H788 454 aa14.47□□□□□ -0.09
TRAPPC4-209ENST00000528230 KANSL2Q9H9L4 492 aa14.47□□□□□ -0.09
TRAPPC4-209ENST00000528230 ARHGEF10LQ9HCE6 1279 aa14.47□□□□□ -0.09
TRAPPC4-209ENST00000528230 TMX2Q9Y320 296 aa14.47□□□□□ -0.09
TRAPPC4-209ENST00000528230 GREB1LQ9C091 1923 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC4-209ENST00000528230 TRIM6-TRIM34B2RNG4 842 aa14.46□□□□□ -0.09
TRAPPC4-209ENST00000528230 TNPO2O14787 897 aaKnown RBP14.46□□□□□ -0.09
TRAPPC4-209ENST00000528230 VCAM1P19320 739 aa14.46□□□□□ -0.09
TRAPPC4-209ENST00000528230 ICA1Q05084 483 aa14.46□□□□□ -0.09
TRAPPC4-209ENST00000528230 IRF5Q13568 498 aa14.46□□□□□ -0.09
TRAPPC4-209ENST00000528230 LBX2Q6XYB7 198 aa14.46□□□□□ -0.09
TRAPPC4-209ENST00000528230 GPRC5AQ8NFJ5 357 aa14.46□□□□□ -0.09
TRAPPC4-209ENST00000528230 RAET1EQ8TD07 263 aa14.46□□□□□ -0.09
TRAPPC4-209ENST00000528230 LPAR1Q92633 364 aa14.46□□□□□ -0.09
TRAPPC4-209ENST00000528230 NAPBQ9H115 298 aa14.46□□□□□ -0.09
TRAPPC4-209ENST00000528230 MKNK2Q9HBH9 465 aa14.46□□□□□ -0.09
TRAPPC4-209ENST00000528230 RBPJLQ9UBG7 517 aa14.46□□□□□ -0.09
TRAPPC4-209ENST00000528230 ECM2O94769 699 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC4-209ENST00000528230 SLC3A2P08195 630 aaKnown RBP14.45□□□□□ -0.1
TRAPPC4-209ENST00000528230 RASA1P20936 1047 aa14.45□□□□□ -0.1
TRAPPC4-209ENST00000528230 IRX6P78412 446 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC4-209ENST00000528230 PRKCZQ05513 592 aa14.45□□□□□ -0.1
TRAPPC4-209ENST00000528230 MCMDC2Q4G0Z9 681 aa14.45□□□□□ -0.1
TRAPPC4-209ENST00000528230 RABGAP1Q9Y3P9 1069 aa14.45□□□□□ -0.1
TRAPPC4-209ENST00000528230 GRK4P32298 578 aa14.44□□□□□ -0.1
TRAPPC4-209ENST00000528230 FLT3LGP49771 235 aa14.44□□□□□ -0.1
TRAPPC4-209ENST00000528230 ALX1Q15699 326 aa14.44□□□□□ -0.1
TRAPPC4-209ENST00000528230 ZNF444Q8N0Y2 327 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC4-209ENST00000528230 SLAIN1Q8ND83 568 aa14.44□□□□□ -0.1
TRAPPC4-209ENST00000528230 PXYLP1Q8TE99 480 aa14.44□□□□□ -0.1
TRAPPC4-209ENST00000528230 RILPL2Q969X0 211 aa14.44□□□□□ -0.1
TRAPPC4-209ENST00000528230 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.44□□□□□ -0.1
TRAPPC4-209ENST00000528230 TMEM106CQ9BVX2 250 aa14.44□□□□□ -0.1
TRAPPC4-209ENST00000528230 RPAP3Q9H6T3 665 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC4-209ENST00000528230 VCPKMTQ9H867 229 aa14.44□□□□□ -0.1
TRAPPC4-209ENST00000528230 TXNRD2Q9NNW7 524 aa14.44□□□□□ -0.1
TRAPPC4-209ENST00000528230 HOXC10Q9NYD6 342 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms