RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 AMPD3Q01432 767 aa7.68□□□□□ -1.18
LIN7C-202ENST00000524596 SNX1Q13596 522 aa7.68□□□□□ -1.18
LIN7C-202ENST00000524596 RBM17Q96I25 401 aaKnown RBP7.68□□□□□ -1.18
LIN7C-202ENST00000524596 CNPY2Q9Y2B0 182 aa7.68□□□□□ -1.18
LIN7C-202ENST00000524596 USH1CQ9Y6N9 552 aa7.68□□□□□ -1.18
LIN7C-202ENST00000524596 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.67□□□□□ -1.18
LIN7C-202ENST00000524596 IQANK1A0A1B0GTG1 560 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 ZSCAN9O15535 394 aaPredicted RBP7.67□□□□□ -1.18
LIN7C-202ENST00000524596 MYL3P08590 195 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 SKIP12755 728 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 CNGA1P29973 690 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 VPS41P49754 854 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 MXI1P50539 228 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 TBX4P57082 545 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 MRPS15P82914 257 aaKnown RBP7.67□□□□□ -1.18
LIN7C-202ENST00000524596 ATP11AP98196 1134 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 C9orf131Q5VYM1 1079 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 SMYD5Q6GMV2 418 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 SDE2Q6IQ49 451 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 OLFM4Q6UX06 510 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 NT5DC4Q86YG4 428 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 FGD4Q96M96 766 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 ACTR5Q9H9F9 607 aaPredicted RBP7.67□□□□□ -1.18
LIN7C-202ENST00000524596 TRPV5Q9NQA5 729 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 PICK1Q9NRD5 415 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 NOP53Q9NZM5 478 aaKnown RBP7.67□□□□□ -1.18
LIN7C-202ENST00000524596 AXIN1O15169 862 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 SULT1B1O43704 296 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 ST18O60284 1047 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 ADCY5O95622 1261 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 RAB27AP51159 221 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 SAFBQ15424 915 aaKnown RBP eCLIP7.67□□□□□ -1.18
LIN7C-202ENST00000524596 RILPL1Q5EBL4 403 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 DDX42Q86XP3 938 aaKnown RBP eCLIP7.67□□□□□ -1.18
LIN7C-202ENST00000524596 TRIM50Q86XT4 487 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 TATDN2Q93075 761 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 TBC1D2Q9BYX2 928 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 FKBP14Q9NWM8 211 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 DACH1Q9UI36 760 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 TRPC6Q9Y210 931 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 ERICH2A1L162 156 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 GOLGA8IPA6NC78 632 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 TTI1O43156 1089 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 BAG2O95816 211 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 PDHA1P08559 390 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 EIF4BP23588 611 aaKnown RBP7.67□□□□□ -1.18
LIN7C-202ENST00000524596 PDIA5Q14554 519 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 RASA2Q15283 850 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 CEP85Q6P2H3 762 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 BRAPQ7Z569 592 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 BRSK2Q8IWQ3 736 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 RBM41Q96IZ5 413 aaKnown RBP7.67□□□□□ -1.18
LIN7C-202ENST00000524596 PARVGQ9HBI0 331 aa7.67□□□□□ -1.18
LIN7C-202ENST00000524596 SEMA3EO15041 775 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 TEX28O15482 410 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 S100A6P06703 90 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 ATF3P18847 181 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 KCNB1Q14721 858 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 CCDC6Q16204 474 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 CWF19L1Q69YN2 538 aaKnown RBP7.66□□□□□ -1.18
LIN7C-202ENST00000524596 SLC44A2Q8IWA5 706 aaPredicted RBP7.66□□□□□ -1.18
LIN7C-202ENST00000524596 ST13P5Q8NFI4 369 aaPredicted RBP7.66□□□□□ -1.18
LIN7C-202ENST00000524596 NEK9Q8TD19 979 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 SIKE1Q9BRV8 207 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 BICC1Q9H694 974 aaKnown RBP7.66□□□□□ -1.18
LIN7C-202ENST00000524596 C8orf4Q9NR00 106 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 TONSLQ96HA7 1378 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 WDR46O15213 610 aaKnown RBP7.66□□□□□ -1.18
LIN7C-202ENST00000524596 EXTL3O43909 919 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 TSPAN1O60635 241 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 RPN1P04843 607 aaKnown RBP7.66□□□□□ -1.18
LIN7C-202ENST00000524596 ZNF445P59923 1031 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 TBL3Q12788 808 aaKnown RBP7.66□□□□□ -1.18
LIN7C-202ENST00000524596 WASHC4Q2M389 1173 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 SYCP2LQ5T4T6 812 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 TEX9Q8N6V9 391 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 PCMTD1Q96MG8 357 aaPredicted RBP7.66□□□□□ -1.18
LIN7C-202ENST00000524596 PARD6BQ9BYG5 372 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 CLSTN2Q9H4D0 955 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 TCP11L1Q9NUJ3 509 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 TMCO1Q9UM00 188 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 SYCE3A1L190 88 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 CASQ2O14958 399 aaPredicted RBP7.66□□□□□ -1.18
LIN7C-202ENST00000524596 CAPN1P07384 714 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 ZKSCAN1P17029 563 aaPredicted RBP7.66□□□□□ -1.18
LIN7C-202ENST00000524596 LBRQ14739 615 aaKnown RBP7.66□□□□□ -1.18
LIN7C-202ENST00000524596 CCDC184Q52MB2 194 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 FAM133BQ5BKY9 247 aaKnown RBP7.66□□□□□ -1.18
LIN7C-202ENST00000524596 MDM1Q8TC05 714 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 LMBR1Q8WVP7 490 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 TNIP3Q96KP6 325 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 ATP6V1HQ9UI12 483 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 PRKAB1Q9Y478 270 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 TOP1P11387 765 aaKnown RBP7.66□□□□□ -1.18
LIN7C-202ENST00000524596 SFPQP23246 707 aaKnown RBP eCLIP7.66□□□□□ -1.18
LIN7C-202ENST00000524596 PDE6CP51160 858 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 MTERF2Q49AM1 385 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 CPXCR1Q8N123 301 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 TOR1AIP2Q8NFQ8 470 aa7.66□□□□□ -1.18
LIN7C-202ENST00000524596 EDEM3Q9BZQ6 932 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms