RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 TRIOBPQ9H2D6 2365 aa20.85■□□□□ 0.93
PACSIN3-202ENST00000524509 FAM196BA6NMK8 535 aa20.84■□□□□ 0.93
PACSIN3-202ENST00000524509 CXCL11O14625 94 aa20.84■□□□□ 0.93
PACSIN3-202ENST00000524509 REC8O95072 547 aa20.84■□□□□ 0.93
PACSIN3-202ENST00000524509 SHMT1P34896 483 aa20.84■□□□□ 0.93
PACSIN3-202ENST00000524509 TMEM179Q6ZVK1 233 aa20.84■□□□□ 0.93
PACSIN3-202ENST00000524509 OTUD5Q96G74 571 aa20.84■□□□□ 0.93
PACSIN3-202ENST00000524509 DNAJC18Q9H819 358 aa20.84■□□□□ 0.93
PACSIN3-202ENST00000524509 SZT2Q5T011 3432 aa20.84■□□□□ 0.93
PACSIN3-202ENST00000524509 H0YGN5 161 aa20.83■□□□□ 0.93
PACSIN3-202ENST00000524509 FOXP2O15409 715 aa20.83■□□□□ 0.93
PACSIN3-202ENST00000524509 EPB41L2O43491 1005 aaKnown RBP20.83■□□□□ 0.93
PACSIN3-202ENST00000524509 PTPRAP18433 802 aa20.83■□□□□ 0.93
PACSIN3-202ENST00000524509 SNAPC2Q13487 334 aa20.83■□□□□ 0.93
PACSIN3-202ENST00000524509 CNKSR2Q8WXI2 1034 aa20.83■□□□□ 0.93
PACSIN3-202ENST00000524509 NAV1Q8NEY1 1877 aa20.82■□□□□ 0.92
PACSIN3-202ENST00000524509 CYP2D7A0A087X1C5 515 aa20.82■□□□□ 0.92
PACSIN3-202ENST00000524509 MPHOSPH10O00566 681 aaKnown RBP20.82■□□□□ 0.92
PACSIN3-202ENST00000524509 MFSD6Q6ZSS7 791 aa20.82■□□□□ 0.92
PACSIN3-202ENST00000524509 FAM43AQ8N2R8 423 aa20.82■□□□□ 0.92
PACSIN3-202ENST00000524509 MAP4K1Q92918 833 aa20.82■□□□□ 0.92
PACSIN3-202ENST00000524509 DYNLL2Q96FJ2 89 aa20.82■□□□□ 0.92
PACSIN3-202ENST00000524509 ANO2Q9NQ90 1003 aa20.82■□□□□ 0.92
PACSIN3-202ENST00000524509 ZBTB21Q9ULJ3 1066 aa20.82■□□□□ 0.92
PACSIN3-202ENST00000524509 ZHX2Q9Y6X8 837 aa20.82■□□□□ 0.92
PACSIN3-202ENST00000524509 MYH1P12882 1939 aa20.81■□□□□ 0.92
PACSIN3-202ENST00000524509 GNRH1P01148 92 aa20.81■□□□□ 0.92
PACSIN3-202ENST00000524509 GH2P01242 217 aa20.81■□□□□ 0.92
PACSIN3-202ENST00000524509 CETPP11597 493 aa20.81■□□□□ 0.92
PACSIN3-202ENST00000524509 RNF20Q5VTR2 975 aa20.81■□□□□ 0.92
PACSIN3-202ENST00000524509 ZNF280CQ8ND82 737 aa20.81■□□□□ 0.92
PACSIN3-202ENST00000524509 WDR18Q9BV38 432 aa20.81■□□□□ 0.92
PACSIN3-202ENST00000524509 SH2D4AQ9H788 454 aa20.81■□□□□ 0.92
PACSIN3-202ENST00000524509 CNNM2Q9H8M5 875 aa20.81■□□□□ 0.92
PACSIN3-202ENST00000524509 ZCCHC17Q9NP64 241 aaKnown RBP20.81■□□□□ 0.92
PACSIN3-202ENST00000524509 CDK5RAP2Q96SN8 1893 aa20.8■□□□□ 0.92
PACSIN3-202ENST00000524509 ORC4O43929 436 aa20.8■□□□□ 0.92
PACSIN3-202ENST00000524509 TLR2O60603 784 aa20.8■□□□□ 0.92
PACSIN3-202ENST00000524509 GDF11O95390 407 aa20.8■□□□□ 0.92
PACSIN3-202ENST00000524509 FGRP09769 529 aa20.8■□□□□ 0.92
PACSIN3-202ENST00000524509 PRMT2P55345 433 aa20.8■□□□□ 0.92
PACSIN3-202ENST00000524509 TRDNQ13061 729 aa20.8■□□□□ 0.92
PACSIN3-202ENST00000524509 KIF22Q14807 665 aa20.8■□□□□ 0.92
PACSIN3-202ENST00000524509 AKNAD1Q5T1N1 836 aa20.8■□□□□ 0.92
PACSIN3-202ENST00000524509 FASTKD5Q7L8L6 764 aaKnown RBP20.8■□□□□ 0.92
PACSIN3-202ENST00000524509 STAG1Q8WVM7 1258 aa20.8■□□□□ 0.92
PACSIN3-202ENST00000524509 KANSL2Q9H9L4 492 aa20.8■□□□□ 0.92
PACSIN3-202ENST00000524509 KCNH4Q9UQ05 1017 aa20.8■□□□□ 0.92
PACSIN3-202ENST00000524509 DDX60LQ5H9U9 1706 aaKnown RBP20.79■□□□□ 0.92
PACSIN3-202ENST00000524509 C19orf81C9J6K1 198 aa20.79■□□□□ 0.92
PACSIN3-202ENST00000524509 TSPY3P0CV98 308 aa20.79■□□□□ 0.92
PACSIN3-202ENST00000524509 TSPY8P0CW00 308 aa20.79■□□□□ 0.92
PACSIN3-202ENST00000524509 LACTBP83111 547 aaPredicted RBP20.79■□□□□ 0.92
PACSIN3-202ENST00000524509 RAB3GAP1Q15042 981 aa20.79■□□□□ 0.92
PACSIN3-202ENST00000524509 SH3TC2Q8TF17 1288 aa20.79■□□□□ 0.92
PACSIN3-202ENST00000524509 AFG3L2Q9Y4W6 797 aa20.79■□□□□ 0.92
PACSIN3-202ENST00000524509 RANBP2P49792 3224 aaKnown RBP20.78■□□□□ 0.92
PACSIN3-202ENST00000524509 IRF6O14896 467 aa20.78■□□□□ 0.92
PACSIN3-202ENST00000524509 MYCP01106 439 aaPredicted RBP20.78■□□□□ 0.92
PACSIN3-202ENST00000524509 USP14P54578 494 aa20.78■□□□□ 0.92
PACSIN3-202ENST00000524509 CCDC178Q5BJE1 867 aa20.78■□□□□ 0.92
PACSIN3-202ENST00000524509 SLC44A5Q8NCS7 719 aa20.78■□□□□ 0.92
PACSIN3-202ENST00000524509 ESR2Q92731 530 aa20.78■□□□□ 0.92
PACSIN3-202ENST00000524509 KRT23Q9C075 422 aa20.78■□□□□ 0.92
PACSIN3-202ENST00000524509 ARHGAP39Q9C0H5 1083 aa20.78■□□□□ 0.92
PACSIN3-202ENST00000524509 ARHGEF10LQ9HCE6 1279 aa20.78■□□□□ 0.92
PACSIN3-202ENST00000524509 TOMM22Q9NS69 142 aa20.78■□□□□ 0.92
PACSIN3-202ENST00000524509 ZSWIM8A7E2V4 1837 aa20.77■□□□□ 0.92
PACSIN3-202ENST00000524509 TSPY2A6NKD2 308 aa20.77■□□□□ 0.92
PACSIN3-202ENST00000524509 USP17L10C9JJH3 530 aa20.77■□□□□ 0.92
PACSIN3-202ENST00000524509 RASA1P20936 1047 aa20.77■□□□□ 0.92
PACSIN3-202ENST00000524509 PTH1RQ03431 593 aa20.77■□□□□ 0.92
PACSIN3-202ENST00000524509 CTDSPL2Q05D32 466 aa20.77■□□□□ 0.92
PACSIN3-202ENST00000524509 LSG1Q9H089 658 aaKnown RBP20.77■□□□□ 0.92
PACSIN3-202ENST00000524509 IL25Q9H293 177 aa20.77■□□□□ 0.92
PACSIN3-202ENST00000524509 SYNPO2Q9UMS6 1093 aa20.77■□□□□ 0.92
PACSIN3-202ENST00000524509 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.77■□□□□ 0.92
PACSIN3-202ENST00000524509 SLURP2P0DP57 97 aa20.76■□□□□ 0.91
PACSIN3-202ENST00000524509 ZKSCAN1P17029 563 aaPredicted RBP20.76■□□□□ 0.91
PACSIN3-202ENST00000524509 HAND2P61296 217 aa20.76■□□□□ 0.91
PACSIN3-202ENST00000524509 SPP2Q13103 211 aa20.76■□□□□ 0.91
PACSIN3-202ENST00000524509 PABPC4Q13310 644 aaKnown RBP eCLIP20.76■□□□□ 0.91
PACSIN3-202ENST00000524509 RRP1BQ14684 758 aaKnown RBP20.76■□□□□ 0.91
PACSIN3-202ENST00000524509 CHRDL2Q6WN34 429 aa20.76■□□□□ 0.91
PACSIN3-202ENST00000524509 NEDD1Q8NHV4 660 aa20.76■□□□□ 0.91
PACSIN3-202ENST00000524509 TMOD4Q9NZQ9 345 aa20.76■□□□□ 0.91
PACSIN3-202ENST00000524509 RBM8AQ9Y5S9 174 aaKnown RBP20.76■□□□□ 0.91
PACSIN3-202ENST00000524509 BTBD19C9JJ37 291 aa20.75■□□□□ 0.91
PACSIN3-202ENST00000524509 RANBP6O60518 1105 aaKnown RBP20.75■□□□□ 0.91
PACSIN3-202ENST00000524509 AKR1B1P15121 316 aa20.75■□□□□ 0.91
PACSIN3-202ENST00000524509 BACE1P56817 501 aa20.75■□□□□ 0.91
PACSIN3-202ENST00000524509 TFAP4Q01664 338 aa20.75■□□□□ 0.91
PACSIN3-202ENST00000524509 ICA1Q05084 483 aa20.75■□□□□ 0.91
PACSIN3-202ENST00000524509 STK11IPQ8N1F8 1099 aa20.75■□□□□ 0.91
PACSIN3-202ENST00000524509 PROCA1Q8NCQ7 364 aaPredicted RBP20.75■□□□□ 0.91
PACSIN3-202ENST00000524509 FEZ1Q99689 392 aa20.75■□□□□ 0.91
PACSIN3-202ENST00000524509 A0A0G2JLL6 359 aaPredicted RBP20.74■□□□□ 0.91
PACSIN3-202ENST00000524509 TRIM75PA6NK02 468 aa20.74■□□□□ 0.91
PACSIN3-202ENST00000524509 PRDM1O75626 825 aa20.74■□□□□ 0.91
PACSIN3-202ENST00000524509 MCCP23508 829 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms