RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 CFHR5Q9BXR6 569 aa26.8■■□□□ 1.88
SKP1-206ENST00000519321 SH2D4AQ9H788 454 aa26.8■■□□□ 1.88
SKP1-206ENST00000519321 TMOD4Q9NZQ9 345 aa26.8■■□□□ 1.88
SKP1-206ENST00000519321 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.8■■□□□ 1.88
SKP1-206ENST00000519321 PTPRFP10586 1907 aa26.8■■□□□ 1.88
SKP1-206ENST00000519321 BTBD19C9JJ37 291 aa26.79■■□□□ 1.88
SKP1-206ENST00000519321 ORC4O43929 436 aa26.79■■□□□ 1.88
SKP1-206ENST00000519321 TSPY3P0CV98 308 aa26.79■■□□□ 1.88
SKP1-206ENST00000519321 TSPY8P0CW00 308 aa26.79■■□□□ 1.88
SKP1-206ENST00000519321 HAND2P61296 217 aa26.79■■□□□ 1.88
SKP1-206ENST00000519321 ICA1Q05084 483 aa26.79■■□□□ 1.88
SKP1-206ENST00000519321 MTMR2Q13614 643 aa26.79■■□□□ 1.88
SKP1-206ENST00000519321 MOGSQ13724 837 aa26.79■■□□□ 1.88
SKP1-206ENST00000519321 MFSD6Q6ZSS7 791 aa26.79■■□□□ 1.88
SKP1-206ENST00000519321 FEZ1Q99689 392 aa26.79■■□□□ 1.88
SKP1-206ENST00000519321 ARHGEF10LQ9HCE6 1279 aa26.79■■□□□ 1.88
SKP1-206ENST00000519321 FOXN1O15353 648 aa26.78■■□□□ 1.88
SKP1-206ENST00000519321 HMGCS2P54868 508 aa26.78■■□□□ 1.88
SKP1-206ENST00000519321 PPP4R3BQ5MIZ7 849 aa26.78■■□□□ 1.88
SKP1-206ENST00000519321 AKNAD1Q5T1N1 836 aa26.78■■□□□ 1.88
SKP1-206ENST00000519321 USP17L2Q6R6M4 530 aa26.78■■□□□ 1.88
SKP1-206ENST00000519321 FAM43AQ8N2R8 423 aa26.78■■□□□ 1.88
SKP1-206ENST00000519321 STAG1Q8WVM7 1258 aa26.78■■□□□ 1.88
SKP1-206ENST00000519321 KIAA1683Q9H0B3 1180 aa26.78■■□□□ 1.88
SKP1-206ENST00000519321 SLC45A1Q9Y2W3 748 aa26.78■■□□□ 1.88
SKP1-206ENST00000519321 LAMA4Q16363 1823 aa26.77■■□□□ 1.88
SKP1-206ENST00000519321 PTH1RQ03431 593 aa26.77■■□□□ 1.88
SKP1-206ENST00000519321 PABPC4Q13310 644 aaKnown RBP eCLIP26.77■■□□□ 1.88
SKP1-206ENST00000519321 NEDD1Q8NHV4 660 aa26.77■■□□□ 1.88
SKP1-206ENST00000519321 MAP4K1Q92918 833 aa26.77■■□□□ 1.88
SKP1-206ENST00000519321 ZFYVE28Q9HCC9 887 aa26.77■■□□□ 1.88
SKP1-206ENST00000519321 TOMM22Q9NS69 142 aa26.77■■□□□ 1.88
SKP1-206ENST00000519321 PLIN4Q96Q06 1357 aa26.76■■□□□ 1.87
SKP1-206ENST00000519321 TFAP4Q01664 338 aa26.76■■□□□ 1.87
SKP1-206ENST00000519321 TAF1CQ15572 869 aaPredicted RBP26.76■■□□□ 1.87
SKP1-206ENST00000519321 GPAT2Q6NUI2 795 aa26.76■■□□□ 1.87
SKP1-206ENST00000519321 AGTPBP1Q9UPW5 1226 aa26.76■■□□□ 1.87
SKP1-206ENST00000519321 GREB1LQ9C091 1923 aaPredicted RBP26.75■■□□□ 1.87
SKP1-206ENST00000519321 TSPY2A6NKD2 308 aa26.75■■□□□ 1.87
SKP1-206ENST00000519321 PDHXO00330 501 aa26.75■■□□□ 1.87
SKP1-206ENST00000519321 RANBP6O60518 1105 aaKnown RBP26.75■■□□□ 1.87
SKP1-206ENST00000519321 C12orf42Q96LP6 360 aa26.75■■□□□ 1.87
SKP1-206ENST00000519321 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.75■■□□□ 1.87
SKP1-206ENST00000519321 LOC285556D6RIA3 1793 aa26.75■■□□□ 1.87
SKP1-206ENST00000519321 TBC1D10CQ8IV04 446 aa26.74■■□□□ 1.87
SKP1-206ENST00000519321 ACER1Q8TDN7 264 aa26.74■■□□□ 1.87
SKP1-206ENST00000519321 LSG1Q9H089 658 aaKnown RBP26.74■■□□□ 1.87
SKP1-206ENST00000519321 ANO2Q9NQ90 1003 aa26.74■■□□□ 1.87
SKP1-206ENST00000519321 NYAP2Q9P242 653 aa26.74■■□□□ 1.87
SKP1-206ENST00000519321 TMX2Q9Y320 296 aa26.74■■□□□ 1.87
SKP1-206ENST00000519321 TBC1D8O95759 1140 aa26.73■■□□□ 1.87
SKP1-206ENST00000519321 HSPA8P11142 646 aaKnown RBP26.73■■□□□ 1.87
SKP1-206ENST00000519321 EEF2P13639 858 aaKnown RBP26.73■■□□□ 1.87
SKP1-206ENST00000519321 NOM1Q5C9Z4 860 aaKnown RBP26.73■■□□□ 1.87
SKP1-206ENST00000519321 FAM47AQ5JRC9 791 aa26.73■■□□□ 1.87
SKP1-206ENST00000519321 RRP12Q5JTH9 1297 aaKnown RBP26.73■■□□□ 1.87
SKP1-206ENST00000519321 PARK7Q99497 189 aaKnown RBP26.73■■□□□ 1.87
SKP1-206ENST00000519321 NBPF3Q9H094 633 aa26.73■■□□□ 1.87
SKP1-206ENST00000519321 CNNM2Q9H8M5 875 aa26.73■■□□□ 1.87
SKP1-206ENST00000519321 INCENPQ9NQS7 918 aa26.73■■□□□ 1.87
SKP1-206ENST00000519321 PNMA3Q9UL41 463 aa26.73■■□□□ 1.87
SKP1-206ENST00000519321 IGKV6D-41A0A0C4DH26 115 aa26.72■■□□□ 1.87
SKP1-206ENST00000519321 ATP2B2Q01814 1243 aa26.72■■□□□ 1.87
SKP1-206ENST00000519321 CRHR2Q13324 411 aa26.72■■□□□ 1.87
SKP1-206ENST00000519321 ESR2Q92731 530 aa26.72■■□□□ 1.87
SKP1-206ENST00000519321 EMILIN3Q9NT22 766 aa26.72■■□□□ 1.87
SKP1-206ENST00000519321 RBM8AQ9Y5S9 174 aaKnown RBP26.72■■□□□ 1.87
SKP1-206ENST00000519321 A0A1W2PRG0 241 aa26.71■■□□□ 1.87
SKP1-206ENST00000519321 TTLL1O95922 423 aa26.71■■□□□ 1.87
SKP1-206ENST00000519321 OSBPP22059 807 aa26.71■■□□□ 1.87
SKP1-206ENST00000519321 SIAH1Q8IUQ4 282 aa26.71■■□□□ 1.87
SKP1-206ENST00000519321 LPAR1Q92633 364 aa26.71■■□□□ 1.87
SKP1-206ENST00000519321 CEP95Q96GE4 821 aa26.71■■□□□ 1.87
SKP1-206ENST00000519321 KRT23Q9C075 422 aa26.71■■□□□ 1.87
SKP1-206ENST00000519321 MTMR4Q9NYA4 1195 aa26.71■■□□□ 1.87
SKP1-206ENST00000519321 TSKSQ9UJT2 592 aa26.71■■□□□ 1.87
SKP1-206ENST00000519321 SYNPO2Q9UMS6 1093 aa26.71■■□□□ 1.87
SKP1-206ENST00000519321 TACC3Q9Y6A5 838 aa26.71■■□□□ 1.87
SKP1-206ENST00000519321 HOXA7P31268 230 aaPredicted RBP26.7■■□□□ 1.86
SKP1-206ENST00000519321 ZYXQ15942 572 aaKnown RBP26.7■■□□□ 1.86
SKP1-206ENST00000519321 TREML2Q5T2D2 321 aa26.7■■□□□ 1.86
SKP1-206ENST00000519321 CLEC10AQ8IUN9 316 aa26.7■■□□□ 1.86
SKP1-206ENST00000519321 GOPCQ9HD26 462 aa26.7■■□□□ 1.86
SKP1-206ENST00000519321 TCP11L1Q9NUJ3 509 aa26.7■■□□□ 1.86
SKP1-206ENST00000519321 PCNTO95613 3336 aa26.7■■□□□ 1.86
SKP1-206ENST00000519321 CYP21A2P08686 494 aa26.69■■□□□ 1.86
SKP1-206ENST00000519321 LBX1P52954 281 aa26.69■■□□□ 1.86
SKP1-206ENST00000519321 TRDNQ13061 729 aa26.69■■□□□ 1.86
SKP1-206ENST00000519321 MKL1Q969V6 931 aa26.69■■□□□ 1.86
SKP1-206ENST00000519321 VCPKMTQ9H867 229 aa26.69■■□□□ 1.86
SKP1-206ENST00000519321 NEDD4P46934 1319 aa26.68■■□□□ 1.86
SKP1-206ENST00000519321 GPR25O00155 361 aa26.68■■□□□ 1.86
SKP1-206ENST00000519321 TLR2O60603 784 aa26.68■■□□□ 1.86
SKP1-206ENST00000519321 REC8O95072 547 aa26.68■■□□□ 1.86
SKP1-206ENST00000519321 DGKZQ13574 1117 aa26.68■■□□□ 1.86
SKP1-206ENST00000519321 CCDC178Q5BJE1 867 aa26.68■■□□□ 1.86
SKP1-206ENST00000519321 PRDM10Q9NQV6 1147 aa26.68■■□□□ 1.86
SKP1-206ENST00000519321 CLIP2Q9UDT6 1046 aa26.68■■□□□ 1.86
SKP1-206ENST00000519321 USP17L15C9J2P7 530 aa26.67■■□□□ 1.86
SKP1-206ENST00000519321 USP17L13C9JLJ4 530 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms