RNA–Protein interactions for RNA: ENST00000517992.1

SNTB1-202, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTB1, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-202ENST00000517992 SPECC1Q5M775 1068 aa28.55■■■□□ 2.16
SNTB1-202ENST00000517992 CCDC34Q96HJ3 373 aa28.55■■■□□ 2.16
SNTB1-202ENST00000517992 RBM28Q9NW13 759 aaKnown RBP28.55■■■□□ 2.16
SNTB1-202ENST00000517992 AATFQ9NY61 560 aaKnown RBP eCLIP28.55■■■□□ 2.16
SNTB1-202ENST00000517992 RAI14Q9P0K7 980 aa28.55■■■□□ 2.16
SNTB1-202ENST00000517992 FGRP09769 529 aa28.54■■■□□ 2.16
SNTB1-202ENST00000517992 ETF1P62495 437 aaKnown RBP28.54■■■□□ 2.16
SNTB1-202ENST00000517992 TBX2Q13207 712 aaPredicted RBP28.54■■■□□ 2.16
SNTB1-202ENST00000517992 EZH2Q15910 746 aaKnown RBP28.54■■■□□ 2.16
SNTB1-202ENST00000517992 CLEC4GQ6UXB4 293 aa28.54■■■□□ 2.16
SNTB1-202ENST00000517992 OXER1Q8TDS5 423 aa28.54■■■□□ 2.16
SNTB1-202ENST00000517992 SDR42E1Q8WUS8 393 aa28.54■■■□□ 2.16
SNTB1-202ENST00000517992 ZSCAN10Q96SZ4 725 aaPredicted RBP28.54■■■□□ 2.16
SNTB1-202ENST00000517992 INTS13Q9NVM9 706 aa28.54■■■□□ 2.16
SNTB1-202ENST00000517992 DDX41Q9UJV9 622 aaKnown RBP28.54■■■□□ 2.16
SNTB1-202ENST00000517992 MINDY4BA8MYZ0 360 aa28.54■■■□□ 2.16
SNTB1-202ENST00000517992 PRPF3O43395 683 aaKnown RBP28.54■■■□□ 2.16
SNTB1-202ENST00000517992 ZSCAN20P17040 1043 aaPredicted RBP28.54■■■□□ 2.16
SNTB1-202ENST00000517992 FUT2Q10981 343 aa28.54■■■□□ 2.16
SNTB1-202ENST00000517992 RC3H1Q5TC82 1133 aaKnown RBP28.54■■■□□ 2.16
SNTB1-202ENST00000517992 SYT10Q6XYQ8 523 aa28.54■■■□□ 2.16
SNTB1-202ENST00000517992 DEFB132Q7Z7B7 95 aa28.54■■■□□ 2.16
SNTB1-202ENST00000517992 PHF20Q9BVI0 1012 aa28.54■■■□□ 2.16
SNTB1-202ENST00000517992 TRIM75PA6NK02 468 aa28.53■■■□□ 2.16
SNTB1-202ENST00000517992 CALM1P0DP23 149 aa28.53■■■□□ 2.16
SNTB1-202ENST00000517992 CALM2P0DP24 149 aa28.53■■■□□ 2.16
SNTB1-202ENST00000517992 CALM3P0DP25 149 aa28.53■■■□□ 2.16
SNTB1-202ENST00000517992 SF3B3Q15393 1217 aaKnown RBP28.53■■■□□ 2.16
SNTB1-202ENST00000517992 ANKRD18AQ8IVF6 992 aa28.53■■■□□ 2.16
SNTB1-202ENST00000517992 ENAHQ8N8S7 591 aaPredicted RBP28.53■■■□□ 2.16
SNTB1-202ENST00000517992 ARHGAP6O43182 974 aa28.53■■■□□ 2.16
SNTB1-202ENST00000517992 PRR29P0C7W0 189 aa28.53■■■□□ 2.16
SNTB1-202ENST00000517992 DMTNQ08495 405 aa28.53■■■□□ 2.16
SNTB1-202ENST00000517992 CMTR1Q8N1G2 835 aaKnown RBP28.53■■■□□ 2.16
SNTB1-202ENST00000517992 CCDC82Q8N4S0 544 aa28.53■■■□□ 2.16
SNTB1-202ENST00000517992 CABP5Q9NP86 173 aa28.53■■■□□ 2.16
SNTB1-202ENST00000517992 TMEM232C9JQI7 657 aa28.52■■■□□ 2.16
SNTB1-202ENST00000517992 ERCC5P28715 1186 aaPredicted RBP28.52■■■□□ 2.16
SNTB1-202ENST00000517992 KRT2P35908 639 aa28.52■■■□□ 2.16
SNTB1-202ENST00000517992 PKN1Q16512 942 aa28.52■■■□□ 2.16
SNTB1-202ENST00000517992 ABCF2Q9UG63 623 aa28.52■■■□□ 2.16
SNTB1-202ENST00000517992 SPDYE4A6NLX3 237 aa28.52■■■□□ 2.16
SNTB1-202ENST00000517992 CATIPQ7Z7H3 387 aa28.52■■■□□ 2.16
SNTB1-202ENST00000517992 TMEM139Q8IV31 216 aa28.52■■■□□ 2.16
SNTB1-202ENST00000517992 CAMKK2Q96RR4 588 aa28.52■■■□□ 2.16
SNTB1-202ENST00000517992 CSRNP2Q9H175 543 aa28.52■■■□□ 2.16
SNTB1-202ENST00000517992 BSDC1Q9NW68 430 aaPredicted RBP28.52■■■□□ 2.16
SNTB1-202ENST00000517992 NFE2L3Q9Y4A8 694 aa28.52■■■□□ 2.16
SNTB1-202ENST00000517992 ZSCAN12O43309 604 aa28.51■■■□□ 2.15
SNTB1-202ENST00000517992 DDAH1O94760 285 aa28.51■■■□□ 2.15
SNTB1-202ENST00000517992 SF3B2Q13435 895 aaKnown RBP28.51■■■□□ 2.15
SNTB1-202ENST00000517992 GTPBP4Q9BZE4 634 aaKnown RBP28.51■■■□□ 2.15
SNTB1-202ENST00000517992 RGL2O15211 777 aa28.5■■■□□ 2.15
SNTB1-202ENST00000517992 PLCD1P51178 756 aa28.5■■■□□ 2.15
SNTB1-202ENST00000517992 FMR1Q06787 632 aaKnown RBP eCLIP28.5■■■□□ 2.15
SNTB1-202ENST00000517992 UBR3Q6ZT12 1888 aa28.5■■■□□ 2.15
SNTB1-202ENST00000517992 SEMA3EO15041 775 aa28.5■■■□□ 2.15
SNTB1-202ENST00000517992 RPS6KA4O75676 772 aa28.5■■■□□ 2.15
SNTB1-202ENST00000517992 GYG1P46976 350 aa28.5■■■□□ 2.15
SNTB1-202ENST00000517992 CAVIN4Q5BKX8 364 aa28.5■■■□□ 2.15
SNTB1-202ENST00000517992 IQCA1Q86XH1 822 aa28.5■■■□□ 2.15
SNTB1-202ENST00000517992 FERMT2Q96AC1 680 aa28.5■■■□□ 2.15
SNTB1-202ENST00000517992 SHISA4Q96DD7 197 aa28.5■■■□□ 2.15
SNTB1-202ENST00000517992 PDS5AQ29RF7 1337 aaKnown RBP28.5■■■□□ 2.15
SNTB1-202ENST00000517992 CASZ1Q86V15 1759 aa28.49■■■□□ 2.15
SNTB1-202ENST00000517992 ELF2Q15723 593 aa28.49■■■□□ 2.15
SNTB1-202ENST00000517992 IFIT1BQ5T764 474 aaKnown RBP28.49■■■□□ 2.15
SNTB1-202ENST00000517992 HOMER1Q86YM7 354 aa28.49■■■□□ 2.15
SNTB1-202ENST00000517992 GOLGA6L9A6NEM1 432 aa28.49■■■□□ 2.15
SNTB1-202ENST00000517992 KMT5BQ4FZB7 885 aa28.49■■■□□ 2.15
SNTB1-202ENST00000517992 IQSEC3Q9UPP2 1182 aaPredicted RBP28.49■■■□□ 2.15
SNTB1-202ENST00000517992 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.49■■■□□ 2.15
SNTB1-202ENST00000517992 SPECC1LQ69YQ0 1117 aa28.48■■■□□ 2.15
SNTB1-202ENST00000517992 REXO1L1PQ8IX06 675 aa28.48■■■□□ 2.15
SNTB1-202ENST00000517992 BRMS1Q9HCU9 246 aa28.48■■■□□ 2.15
SNTB1-202ENST00000517992 RTCBQ9Y3I0 505 aaKnown RBP28.48■■■□□ 2.15
SNTB1-202ENST00000517992 MYH2Q9UKX2 1941 aa28.48■■■□□ 2.15
SNTB1-202ENST00000517992 ZNF827Q17R98 1081 aa28.48■■■□□ 2.15
SNTB1-202ENST00000517992 TRIM65Q6PJ69 517 aa28.48■■■□□ 2.15
SNTB1-202ENST00000517992 SRRTQ9BXP5 876 aaKnown RBP28.48■■■□□ 2.15
SNTB1-202ENST00000517992 PRDM10Q9NQV6 1147 aa28.48■■■□□ 2.15
SNTB1-202ENST00000517992 VPS54Q9P1Q0 977 aa28.48■■■□□ 2.15
SNTB1-202ENST00000517992 STX10O60499 249 aa28.47■■■□□ 2.15
SNTB1-202ENST00000517992 TROAPQ12815 778 aa28.47■■■□□ 2.15
SNTB1-202ENST00000517992 SH3RF1Q7Z6J0 888 aa28.47■■■□□ 2.15
SNTB1-202ENST00000517992 PRDM4Q9UKN5 801 aa28.47■■■□□ 2.15
SNTB1-202ENST00000517992 LAMB1P07942 1786 aa28.47■■■□□ 2.15
SNTB1-202ENST00000517992 SLFN14P0C7P3 912 aa28.46■■■□□ 2.15
SNTB1-202ENST00000517992 ORC4O43929 436 aa28.46■■■□□ 2.15
SNTB1-202ENST00000517992 CDK11BP21127 795 aaKnown RBP28.46■■■□□ 2.15
SNTB1-202ENST00000517992 BAG6P46379 1132 aa28.46■■■□□ 2.15
SNTB1-202ENST00000517992 TMED8Q6PL24 325 aaPredicted RBP28.46■■■□□ 2.15
SNTB1-202ENST00000517992 TMTC3Q6ZXV5 915 aa28.46■■■□□ 2.15
SNTB1-202ENST00000517992 TNFRSF25Q93038 417 aa28.46■■■□□ 2.15
SNTB1-202ENST00000517992 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.46■■■□□ 2.15
SNTB1-202ENST00000517992 BAZ2AQ9UIF9 1905 aaKnown RBP28.46■■■□□ 2.15
SNTB1-202ENST00000517992 USP49Q70CQ1 688 aa28.45■■■□□ 2.15
SNTB1-202ENST00000517992 BAG1Q99933 345 aaPredicted RBP28.45■■■□□ 2.15
SNTB1-202ENST00000517992 ERFEQ4G0M1 354 aa28.45■■■□□ 2.14
SNTB1-202ENST00000517992 FBXO38Q6PIJ6 1188 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms