RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 TRIM6-TRIM34B2RNG4 842 aa28.9■■■□□ 2.22
SRPK1-210ENST00000508473 FMNL1O95466 1100 aaPredicted RBP28.9■■■□□ 2.22
SRPK1-210ENST00000508473 TDO2P48775 406 aa28.9■■■□□ 2.22
SRPK1-210ENST00000508473 GIMAP6Q6P9H5 292 aa28.9■■■□□ 2.22
SRPK1-210ENST00000508473 CCDC129Q6ZRS4 1044 aa28.9■■■□□ 2.22
SRPK1-210ENST00000508473 TRIM47Q96LD4 638 aa28.9■■■□□ 2.22
SRPK1-210ENST00000508473 PTCH2Q9Y6C5 1203 aa28.9■■■□□ 2.22
SRPK1-210ENST00000508473 PATL2C9JE40 543 aaKnown RBP28.89■■■□□ 2.22
SRPK1-210ENST00000508473 SOX10P56693 466 aa28.89■■■□□ 2.22
SRPK1-210ENST00000508473 IRX3P78415 501 aaPredicted RBP28.89■■■□□ 2.22
SRPK1-210ENST00000508473 SBK1Q52WX2 424 aa28.89■■■□□ 2.22
SRPK1-210ENST00000508473 TAOK2Q9UL54 1235 aa28.89■■■□□ 2.22
SRPK1-210ENST00000508473 TMEM179Q6ZVK1 233 aa28.88■■■□□ 2.21
SRPK1-210ENST00000508473 IFNL3Q8IZI9 196 aa28.88■■■□□ 2.21
SRPK1-210ENST00000508473 RILPL2Q969X0 211 aa28.88■■■□□ 2.21
SRPK1-210ENST00000508473 HOXA7P31268 230 aaPredicted RBP28.87■■■□□ 2.21
SRPK1-210ENST00000508473 CLEC10AQ8IUN9 316 aa28.87■■■□□ 2.21
SRPK1-210ENST00000508473 P2RX7Q99572 595 aaKnown RBP28.87■■■□□ 2.21
SRPK1-210ENST00000508473 KIAA1683Q9H0B3 1180 aa28.87■■■□□ 2.21
SRPK1-210ENST00000508473 USP14P54578 494 aa28.86■■■□□ 2.21
SRPK1-210ENST00000508473 FCGRTP55899 365 aa28.86■■■□□ 2.21
SRPK1-210ENST00000508473 CCDC17Q96LX7 622 aa28.86■■■□□ 2.21
SRPK1-210ENST00000508473 A0A1W2PRG0 241 aa28.85■■■□□ 2.21
SRPK1-210ENST00000508473 GNRH1P01148 92 aa28.85■■■□□ 2.21
SRPK1-210ENST00000508473 GCLCP48506 637 aaPredicted RBP28.85■■■□□ 2.21
SRPK1-210ENST00000508473 C12orf42Q96LP6 360 aa28.85■■■□□ 2.21
SRPK1-210ENST00000508473 FAM227BQ96M60 508 aa28.85■■■□□ 2.21
SRPK1-210ENST00000508473 NACAP1Q9BZK3 213 aa28.85■■■□□ 2.21
SRPK1-210ENST00000508473 OSBPL3Q9H4L5 887 aa28.85■■■□□ 2.21
SRPK1-210ENST00000508473 FAM110CQ1W6H9 321 aa28.84■■■□□ 2.21
SRPK1-210ENST00000508473 SRRDQ9UH36 339 aa28.84■■■□□ 2.21
SRPK1-210ENST00000508473 PEX10O60683 326 aa28.83■■■□□ 2.21
SRPK1-210ENST00000508473 VCAM1P19320 739 aa28.83■■■□□ 2.21
SRPK1-210ENST00000508473 HOXD10P28358 340 aa28.83■■■□□ 2.21
SRPK1-210ENST00000508473 ICA1Q05084 483 aa28.83■■■□□ 2.21
SRPK1-210ENST00000508473 NAPBQ9H115 298 aa28.83■■■□□ 2.21
SRPK1-210ENST00000508473 MKNK2Q9HBH9 465 aa28.83■■■□□ 2.21
SRPK1-210ENST00000508473 A0A0D9SFI3 127 aa28.82■■■□□ 2.2
SRPK1-210ENST00000508473 HERVK_113P62684 666 aa28.82■■■□□ 2.2
SRPK1-210ENST00000508473 SIAH1Q8IUQ4 282 aa28.82■■■□□ 2.2
SRPK1-210ENST00000508473 HELLSQ9NRZ9 838 aa28.82■■■□□ 2.2
SRPK1-210ENST00000508473 MYPNQ86TC9 1320 aa28.82■■■□□ 2.2
SRPK1-210ENST00000508473 USP17L15C9J2P7 530 aa28.81■■■□□ 2.2
SRPK1-210ENST00000508473 USP17L13C9JLJ4 530 aa28.81■■■□□ 2.2
SRPK1-210ENST00000508473 USP17L11C9JVI0 530 aa28.81■■■□□ 2.2
SRPK1-210ENST00000508473 USP17L18D6R9N7 530 aa28.81■■■□□ 2.2
SRPK1-210ENST00000508473 USP17L22D6RA61 530 aa28.81■■■□□ 2.2
SRPK1-210ENST00000508473 USP17L17D6RBQ6 530 aa28.81■■■□□ 2.2
SRPK1-210ENST00000508473 USP17L19D6RCP7 530 aa28.81■■■□□ 2.2
SRPK1-210ENST00000508473 USP17L20D6RJB6 530 aa28.81■■■□□ 2.2
SRPK1-210ENST00000508473 PDE4AP27815 886 aa28.81■■■□□ 2.2
SRPK1-210ENST00000508473 PRMT2P55345 433 aa28.81■■■□□ 2.2
SRPK1-210ENST00000508473 ATP2B2Q01814 1243 aa28.81■■■□□ 2.2
SRPK1-210ENST00000508473 PRKCZQ05513 592 aa28.81■■■□□ 2.2
SRPK1-210ENST00000508473 USP17L24Q0WX57 530 aa28.81■■■□□ 2.2
SRPK1-210ENST00000508473 NMIQ13287 307 aaPredicted RBP28.81■■■□□ 2.2
SRPK1-210ENST00000508473 SLC9C1Q4G0N8 1177 aa28.81■■■□□ 2.2
SRPK1-210ENST00000508473 VPS53Q5VIR6 699 aa28.81■■■□□ 2.2
SRPK1-210ENST00000508473 ROBO3Q96MS0 1386 aa28.8■■■□□ 2.2
SRPK1-210ENST00000508473 TNPO2O14787 897 aaKnown RBP28.8■■■□□ 2.2
SRPK1-210ENST00000508473 FOXP2O15409 715 aa28.8■■■□□ 2.2
SRPK1-210ENST00000508473 PRDM1O75626 825 aa28.8■■■□□ 2.2
SRPK1-210ENST00000508473 RASA1P20936 1047 aa28.8■■■□□ 2.2
SRPK1-210ENST00000508473 SH3TC2Q8TF17 1288 aa28.8■■■□□ 2.2
SRPK1-210ENST00000508473 ARMC5Q96C12 935 aa28.8■■■□□ 2.2
SRPK1-210ENST00000508473 RPAP3Q9H6T3 665 aaPredicted RBP28.8■■■□□ 2.2
SRPK1-210ENST00000508473 ARHGEF10LQ9HCE6 1279 aa28.8■■■□□ 2.2
SRPK1-210ENST00000508473 GABRQQ9UN88 632 aa28.8■■■□□ 2.2
SRPK1-210ENST00000508473 MCMDC2Q4G0Z9 681 aa28.79■■■□□ 2.2
SRPK1-210ENST00000508473 CATSPERGQ6ZRH7 1159 aa28.79■■■□□ 2.2
SRPK1-210ENST00000508473 RAET1EQ8TD07 263 aa28.79■■■□□ 2.2
SRPK1-210ENST00000508473 TXNRD2Q9NNW7 524 aa28.79■■■□□ 2.2
SRPK1-210ENST00000508473 MYH8P13535 1937 aa28.79■■■□□ 2.2
SRPK1-210ENST00000508473 EEF2P13639 858 aaKnown RBP28.78■■■□□ 2.2
SRPK1-210ENST00000508473 PPARAQ07869 468 aa28.78■■■□□ 2.2
SRPK1-210ENST00000508473 KIAA1755Q5JYT7 1200 aa28.78■■■□□ 2.2
SRPK1-210ENST00000508473 PAGR1Q9BTK6 254 aa28.78■■■□□ 2.2
SRPK1-210ENST00000508473 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.78■■■□□ 2.2
SRPK1-210ENST00000508473 MORF4L1Q9UBU8 362 aa28.78■■■□□ 2.2
SRPK1-210ENST00000508473 MYCP01106 439 aaPredicted RBP28.77■■■□□ 2.2
SRPK1-210ENST00000508473 SDSP20132 328 aa28.77■■■□□ 2.2
SRPK1-210ENST00000508473 KANSL2Q9H9L4 492 aa28.77■■■□□ 2.2
SRPK1-210ENST00000508473 RBPJLQ9UBG7 517 aa28.77■■■□□ 2.2
SRPK1-210ENST00000508473 TMX2Q9Y320 296 aa28.77■■■□□ 2.2
SRPK1-210ENST00000508473 RGS19P49795 217 aa28.76■■■□□ 2.19
SRPK1-210ENST00000508473 POTEEQ6S8J3 1075 aa28.76■■■□□ 2.19
SRPK1-210ENST00000508473 NBPF11Q86T75 865 aa28.76■■■□□ 2.19
SRPK1-210ENST00000508473 ZNF589Q86UQ0 364 aaPredicted RBP28.76■■■□□ 2.19
SRPK1-210ENST00000508473 ZNF444Q8N0Y2 327 aaPredicted RBP28.76■■■□□ 2.19
SRPK1-210ENST00000508473 SPICE1Q8N0Z3 855 aa28.76■■■□□ 2.19
SRPK1-210ENST00000508473 GPRC5AQ8NFJ5 357 aa28.76■■■□□ 2.19
SRPK1-210ENST00000508473 SH2D4AQ9H788 454 aa28.76■■■□□ 2.19
SRPK1-210ENST00000508473 FLT3LGP49771 235 aa28.75■■■□□ 2.19
SRPK1-210ENST00000508473 TICAM2Q86XR7 235 aa28.75■■■□□ 2.19
SRPK1-210ENST00000508473 COA7Q96BR5 231 aa28.75■■■□□ 2.19
SRPK1-210ENST00000508473 ZNF333Q96JL9 665 aa28.75■■■□□ 2.19
SRPK1-210ENST00000508473 ZNF287Q9HBT7 754 aa28.75■■■□□ 2.19
SRPK1-210ENST00000508473 SLC3A2P08195 630 aaKnown RBP28.74■■■□□ 2.19
SRPK1-210ENST00000508473 Q3C1V9 767 aa28.74■■■□□ 2.19
SRPK1-210ENST00000508473 GTF3C2Q8WUA4 911 aaPredicted RBP28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms