RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 AATFQ9NY61 560 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 SLC4A7Q9Y6M7 1214 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 LRRD1A4D1F6 860 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 P4HA2O15460 535 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 PRC1O43663 620 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 URI1O94763 535 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 ABL1P00519 1130 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 GNAI3P08754 354 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 FOSL1P15407 271 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 CSE1LP55060 971 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 CTAG1AP78358 180 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 KIF5AQ12840 1032 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 BCL2A1Q16548 175 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 KIRREL3Q8IZU9 778 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 ZNF280CQ8ND82 737 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 SLAIN1Q8ND83 568 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 TEKT4Q8WW24 435 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 TCHPQ9BT92 498 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 NUP58Q9BVL2 599 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 ANKZF1Q9H8Y5 726 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 PCMTD2Q9NV79 361 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 NOP53Q9NZM5 478 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 SH3GLB1Q9Y371 365 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 UBN2Q6ZU65 1347 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 NPHP3Q7Z494 1330 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 CPSF1Q10570 1443 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 TMEM110-MUSTN1A8MSY1 372 aa12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 RGS12O14924 1447 aa12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 NSD2O96028 1365 aa12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 PDGFRBP09619 1106 aa12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 HOXD12P35452 270 aa12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 FAM135BQ49AJ0 1406 aa12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 SMUG1Q53HV7 270 aa12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 PPRC1Q5VV67 1664 aaKnown RBP12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 SRGAP1Q7Z6B7 1085 aa12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 DZIP1Q86YF9 867 aaKnown RBP12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 SREK1Q8WXA9 508 aaKnown RBP12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 IRGQQ8WZA9 623 aa12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 SNX27Q96L92 541 aa12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 OSBPL10Q9BXB5 764 aa12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 METTL14Q9HCE5 456 aaKnown RBP12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 GINM1Q9NU53 330 aa12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 DDX19AQ9NUU7 478 aaKnown RBP12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 ANO10Q9NW15 660 aa12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 HESX1Q9UBX0 185 aa12.09□□□□□ -0.47
PDLIM5-210ENST00000508216 BUB1BO60566 1050 aaPredicted RBP12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 GHRP10912 638 aa12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 APLP1P51693 650 aa12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 BYSLQ13895 437 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 EIF4A2Q14240 407 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 SPDYCQ5MJ68 293 aa12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 PLPP6Q8IY26 295 aa12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 IGSF22Q8N9C0 903 aa12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 VPS37AQ8NEZ2 397 aa12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 HVCN1Q96D96 273 aa12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 NUP62CLQ9H1M0 184 aa12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 VCX3BQ9H321 246 aa12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 RPAP3Q9H6T3 665 aaPredicted RBP12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 UBAP1Q9NZ09 502 aa12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 ZMAT5Q9UDW3 170 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 COMMD10Q9Y6G5 202 aa12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 FANCAO15360 1455 aa12.08□□□□□ -0.48
PDLIM5-210ENST00000508216 TMEM247A6NEH6 219 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 TBKBP1A7MCY6 615 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 SH3BP5O60239 455 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 GFPT2O94808 682 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 ALADP13716 330 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 ENPP1P22413 925 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 WDR66Q8TBY9 1149 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 NCSTNQ92542 709 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 RBM33Q96EV2 1170 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 CDK5RAP3Q96JB5 506 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 CHAMP1Q96JM3 812 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 ZNF570Q96NI8 536 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 UIMC1Q96RL1 719 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 SLC39A3Q9BRY0 314 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 RSPH9Q9H1X1 276 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 PREBQ9HCU5 417 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 HELLSQ9NRZ9 838 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 CTNNAL1Q9UBT7 734 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 IFT140Q96RY7 1462 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 CASKIN1Q8WXD9 1431 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 CLASP2O75122 1294 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 ATP6V1G2O95670 118 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 CD97P48960 835 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 ARHGEF6Q15052 776 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 ANO6Q4KMQ2 910 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 TTC39CQ8N584 583 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 SLC43A3Q8NBI5 491 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 CTNNBL1Q8WYA6 563 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 CARD11Q9BXL7 1154 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 EIF2AQ9BY44 585 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 PUS3Q9BZE2 481 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 SYNCQ9H7C4 482 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 ABCB6Q9NP58 842 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 NLRP2Q9NX02 1062 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 C2CD2Q9Y426 696 aa12.07□□□□□ -0.48
PDLIM5-210ENST00000508216 SMARCA4P51532 1647 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms