RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 ATP5J2-PTCD1G3V325 749 aa8.57□□□□□ -1.04
CHD6-209ENST00000482596 CXCL11O14625 94 aa8.57□□□□□ -1.04
CHD6-209ENST00000482596 ADCYAP1R1P41586 468 aa8.57□□□□□ -1.04
CHD6-209ENST00000482596 TNNI2P48788 182 aa8.57□□□□□ -1.04
CHD6-209ENST00000482596 TMEM132AQ24JP5 1023 aa8.57□□□□□ -1.04
CHD6-209ENST00000482596 ZNF365Q70YC5 407 aa8.57□□□□□ -1.04
CHD6-209ENST00000482596 MRPL50Q8N5N7 158 aaKnown RBP8.57□□□□□ -1.04
CHD6-209ENST00000482596 FSD1Q9BTV5 496 aa8.57□□□□□ -1.04
CHD6-209ENST00000482596 RABGEF1Q9UJ41 708 aa8.57□□□□□ -1.04
CHD6-209ENST00000482596 MINPP1Q9UNW1 487 aa8.57□□□□□ -1.04
CHD6-209ENST00000482596 XRCC5P13010 732 aaKnown RBP8.56□□□□□ -1.04
CHD6-209ENST00000482596 CNGA1P29973 690 aa8.56□□□□□ -1.04
CHD6-209ENST00000482596 VCPP55072 806 aaKnown RBP8.56□□□□□ -1.04
CHD6-209ENST00000482596 EIF4A1P60842 406 aaKnown RBP8.56□□□□□ -1.04
CHD6-209ENST00000482596 CDCA8Q53HL2 280 aa8.56□□□□□ -1.04
CHD6-209ENST00000482596 TREML2Q5T2D2 321 aa8.56□□□□□ -1.04
CHD6-209ENST00000482596 FASTKD5Q7L8L6 764 aaKnown RBP8.56□□□□□ -1.04
CHD6-209ENST00000482596 ANKRD18AQ8IVF6 992 aa8.56□□□□□ -1.04
CHD6-209ENST00000482596 DZIP1LQ8IYY4 767 aaKnown RBP8.56□□□□□ -1.04
CHD6-209ENST00000482596 XAGE3Q8WTP9 111 aa8.56□□□□□ -1.04
CHD6-209ENST00000482596 PBXIP1Q96AQ6 731 aa8.56□□□□□ -1.04
CHD6-209ENST00000482596 KCTD12Q96CX2 325 aaKnown RBP8.56□□□□□ -1.04
CHD6-209ENST00000482596 ZNF341Q9BYN7 854 aa8.56□□□□□ -1.04
CHD6-209ENST00000482596 UBE2ZQ9H832 354 aaPredicted RBP8.56□□□□□ -1.04
CHD6-209ENST00000482596 CD209Q9NNX6 404 aa8.56□□□□□ -1.04
CHD6-209ENST00000482596 SH2B1Q9NRF2 756 aaPredicted RBP8.56□□□□□ -1.04
CHD6-209ENST00000482596 SLC45A1Q9Y2W3 748 aa8.56□□□□□ -1.04
CHD6-209ENST00000482596 GOLGA8CPA6NN73 597 aa8.55□□□□□ -1.04
CHD6-209ENST00000482596 DIAPH1O60610 1272 aaKnown RBP8.55□□□□□ -1.04
CHD6-209ENST00000482596 MLLT3P42568 568 aaPredicted RBP8.55□□□□□ -1.04
CHD6-209ENST00000482596 LEXMQ3ZCV2 418 aa8.55□□□□□ -1.04
CHD6-209ENST00000482596 C1orf53Q5VUE5 145 aa8.55□□□□□ -1.04
CHD6-209ENST00000482596 ANO1Q5XXA6 986 aa8.55□□□□□ -1.04
CHD6-209ENST00000482596 PTCRAQ6ISU1 281 aaPredicted RBP8.55□□□□□ -1.04
CHD6-209ENST00000482596 BMP8AQ7Z5Y6 402 aa8.55□□□□□ -1.04
CHD6-209ENST00000482596 USP6NLQ92738 828 aa8.55□□□□□ -1.04
CHD6-209ENST00000482596 NUDT12Q9BQG2 462 aa8.55□□□□□ -1.04
CHD6-209ENST00000482596 TMEM39AQ9NV64 488 aa8.55□□□□□ -1.04
CHD6-209ENST00000482596 FLRT1Q9NZU1 646 aa8.55□□□□□ -1.04
CHD6-209ENST00000482596 KIAA1468Q9P260 1216 aa8.55□□□□□ -1.04
CHD6-209ENST00000482596 MUTYHQ9UIF7 546 aa8.55□□□□□ -1.04
CHD6-209ENST00000482596 ZNF112Q9UJU3 913 aa8.55□□□□□ -1.04
CHD6-209ENST00000482596 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.54□□□□□ -1.04
CHD6-209ENST00000482596 KBTBD13C9JR72 458 aa8.54□□□□□ -1.04
CHD6-209ENST00000482596 PQBP1O60828 265 aaKnown RBP8.54□□□□□ -1.04
CHD6-209ENST00000482596 CSF2RAP15509 400 aa8.54□□□□□ -1.04
CHD6-209ENST00000482596 KCNA5P22460 613 aa8.54□□□□□ -1.04
CHD6-209ENST00000482596 IRS1P35568 1242 aa8.54□□□□□ -1.04
CHD6-209ENST00000482596 ZP2Q05996 745 aa8.54□□□□□ -1.04
CHD6-209ENST00000482596 TAF7Q15545 349 aaPredicted RBP8.54□□□□□ -1.04
CHD6-209ENST00000482596 SUGP1Q8IWZ8 645 aaKnown RBP8.54□□□□□ -1.04
CHD6-209ENST00000482596 SLC44A5Q8NCS7 719 aa8.54□□□□□ -1.04
CHD6-209ENST00000482596 TRPV1Q8NER1 839 aa8.54□□□□□ -1.04
CHD6-209ENST00000482596 ISCA1Q9BUE6 129 aa8.54□□□□□ -1.04
CHD6-209ENST00000482596 ZHX2Q9Y6X8 837 aa8.54□□□□□ -1.04
CHD6-209ENST00000482596 MYBBP1AQ9BQG0 1328 aaKnown RBP8.54□□□□□ -1.04
CHD6-209ENST00000482596 SPEGQ15772 3267 aa8.53□□□□□ -1.04
CHD6-209ENST00000482596 TMEM221A6NGB7 291 aa8.53□□□□□ -1.04
CHD6-209ENST00000482596 TRIM6-TRIM34B2RNG4 842 aa8.53□□□□□ -1.04
CHD6-209ENST00000482596 M0R296 226 aa8.53□□□□□ -1.04
CHD6-209ENST00000482596 SNAP23O00161 211 aa8.53□□□□□ -1.04
CHD6-209ENST00000482596 EIF2S2P20042 333 aaKnown RBP8.53□□□□□ -1.04
CHD6-209ENST00000482596 FAAP100Q0VG06 881 aa8.53□□□□□ -1.04
CHD6-209ENST00000482596 NOL9Q5SY16 702 aaKnown RBP8.53□□□□□ -1.04
CHD6-209ENST00000482596 DCAF15Q66K64 600 aa8.53□□□□□ -1.04
CHD6-209ENST00000482596 TRMT44Q8IYL2 757 aaKnown RBP8.53□□□□□ -1.04
CHD6-209ENST00000482596 HCSTQ9UBK5 93 aa8.53□□□□□ -1.04
CHD6-209ENST00000482596 AGTPBP1Q9UPW5 1226 aa8.53□□□□□ -1.04
CHD6-209ENST00000482596 AFG3L2Q9Y4W6 797 aa8.53□□□□□ -1.04
CHD6-209ENST00000482596 ZNF521Q96K83 1311 aa8.53□□□□□ -1.04
CHD6-209ENST00000482596 U2SURPO15042 1029 aaKnown RBP8.52□□□□□ -1.05
CHD6-209ENST00000482596 ZZEF1O43149 2961 aa8.52□□□□□ -1.05
CHD6-209ENST00000482596 ARHGEF15O94989 841 aa8.52□□□□□ -1.05
CHD6-209ENST00000482596 TIMP1P01033 207 aa8.52□□□□□ -1.05
CHD6-209ENST00000482596 NBL1P41271 181 aa8.52□□□□□ -1.05
CHD6-209ENST00000482596 GRB10Q13322 594 aa8.52□□□□□ -1.05
CHD6-209ENST00000482596 PPIGQ13427 754 aaKnown RBP eCLIP8.52□□□□□ -1.052e-16■□□□□ 8.2
CHD6-209ENST00000482596 CCDC152Q4G0S7 254 aa8.52□□□□□ -1.05
CHD6-209ENST00000482596 EPHA10Q5JZY3 1008 aa8.52□□□□□ -1.05
CHD6-209ENST00000482596 MFSD5Q6N075 450 aa8.52□□□□□ -1.05
CHD6-209ENST00000482596 SPRED2Q7Z698 418 aa8.52□□□□□ -1.05
CHD6-209ENST00000482596 FBXL6Q8N531 539 aa8.52□□□□□ -1.05
CHD6-209ENST00000482596 ARRDC4Q8NCT1 418 aa8.52□□□□□ -1.05
CHD6-209ENST00000482596 SOCS4Q8WXH5 440 aa8.52□□□□□ -1.05
CHD6-209ENST00000482596 RTF1Q92541 710 aaKnown RBP8.52□□□□□ -1.05
CHD6-209ENST00000482596 JARID2Q92833 1246 aaPredicted RBP8.52□□□□□ -1.05
CHD6-209ENST00000482596 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.52□□□□□ -1.05
CHD6-209ENST00000482596 SEMA3EO15041 775 aa8.51□□□□□ -1.05
CHD6-209ENST00000482596 MSCO60682 206 aa8.51□□□□□ -1.05
CHD6-209ENST00000482596 LPXNO60711 386 aa8.51□□□□□ -1.05
CHD6-209ENST00000482596 SLC5A1P13866 664 aa8.51□□□□□ -1.05
CHD6-209ENST00000482596 CRKP46108 304 aa8.51□□□□□ -1.05
CHD6-209ENST00000482596 FKBP1AP62942 108 aaKnown RBP8.51□□□□□ -1.05
CHD6-209ENST00000482596 PUM1Q14671 1186 aaKnown RBP eCLIP8.51□□□□□ -1.05
CHD6-209ENST00000482596 HERC4Q5GLZ8 1057 aaPredicted RBP8.51□□□□□ -1.05
CHD6-209ENST00000482596 CCDC84Q86UT8 332 aaPredicted RBP8.51□□□□□ -1.05
CHD6-209ENST00000482596 PACS2Q86VP3 889 aa8.51□□□□□ -1.05
CHD6-209ENST00000482596 ARNTL2Q8WYA1 636 aa8.51□□□□□ -1.05
CHD6-209ENST00000482596 EDAQ92838 391 aa8.51□□□□□ -1.05
CHD6-209ENST00000482596 IRF2BPLQ9H1B7 796 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms