RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 FLRT1Q9NZU1 646 aa19.73■□□□□ 0.75
DDX56-210ENST00000479440 CNMDO75829 334 aa19.72■□□□□ 0.75
DDX56-210ENST00000479440 GH2P01242 217 aa19.72■□□□□ 0.75
DDX56-210ENST00000479440 HOXC6P09630 235 aa19.72■□□□□ 0.75
DDX56-210ENST00000479440 PTPREP23469 700 aa19.72■□□□□ 0.75
DDX56-210ENST00000479440 GRB14Q14449 540 aa19.72■□□□□ 0.75
DDX56-210ENST00000479440 CDK5RAP2Q96SN8 1893 aa19.72■□□□□ 0.75
DDX56-210ENST00000479440 SAP30BPQ9UHR5 308 aaKnown RBP19.72■□□□□ 0.75
DDX56-210ENST00000479440 CCDC158Q5M9N0 1113 aa19.71■□□□□ 0.75
DDX56-210ENST00000479440 POTEEQ6S8J3 1075 aa19.71■□□□□ 0.75
DDX56-210ENST00000479440 MAFAQ8NHW3 353 aaPredicted RBP19.71■□□□□ 0.75
DDX56-210ENST00000479440 ATP11BQ9Y2G3 1177 aa19.71■□□□□ 0.75
DDX56-210ENST00000479440 NDUFB9Q9Y6M9 179 aa19.71■□□□□ 0.75
DDX56-210ENST00000479440 ZNF236Q9UL36 1845 aa19.7■□□□□ 0.74
DDX56-210ENST00000479440 KBTBD13C9JR72 458 aa19.7■□□□□ 0.74
DDX56-210ENST00000479440 LBX2Q6XYB7 198 aa19.7■□□□□ 0.74
DDX56-210ENST00000479440 CATSPERGQ6ZRH7 1159 aa19.7■□□□□ 0.74
DDX56-210ENST00000479440 ADGRA1Q86SQ6 560 aa19.7■□□□□ 0.74
DDX56-210ENST00000479440 CERS3Q8IU89 383 aa19.7■□□□□ 0.74
DDX56-210ENST00000479440 CDX2Q99626 313 aaPredicted RBP19.7■□□□□ 0.74
DDX56-210ENST00000479440 GNAI2P04899 355 aa19.69■□□□□ 0.74
DDX56-210ENST00000479440 CYBAP13498 195 aa19.69■□□□□ 0.74
DDX56-210ENST00000479440 VCAM1P19320 739 aa19.69■□□□□ 0.74
DDX56-210ENST00000479440 ARRDC4Q8NCT1 418 aa19.69■□□□□ 0.74
DDX56-210ENST00000479440 ARHGAP45Q92619 1136 aa19.69■□□□□ 0.74
DDX56-210ENST00000479440 CDCA7LQ96GN5 454 aa19.69■□□□□ 0.74
DDX56-210ENST00000479440 KIAA1683Q9H0B3 1180 aa19.69■□□□□ 0.74
DDX56-210ENST00000479440 GPR108Q9NPR9 543 aa19.69■□□□□ 0.74
DDX56-210ENST00000479440 PRDM5Q9NQX1 630 aaPredicted RBP19.69■□□□□ 0.74
DDX56-210ENST00000479440 SNRKQ9NRH2 765 aa19.69■□□□□ 0.74
DDX56-210ENST00000479440 CYP2C19P33261 490 aa19.68■□□□□ 0.74
DDX56-210ENST00000479440 RAB3GAP1Q15042 981 aa19.68■□□□□ 0.74
DDX56-210ENST00000479440 TATDN1Q6P1N9 297 aa19.68■□□□□ 0.74
DDX56-210ENST00000479440 NPLOC4Q8TAT6 608 aa19.68■□□□□ 0.74
DDX56-210ENST00000479440 EHD4Q9H223 541 aa19.68■□□□□ 0.74
DDX56-210ENST00000479440 CYP2E1P05181 493 aaPredicted RBP19.67■□□□□ 0.74
DDX56-210ENST00000479440 USP5P45974 858 aa19.67■□□□□ 0.74
DDX56-210ENST00000479440 SMAD3P84022 425 aaKnown RBP19.67■□□□□ 0.74
DDX56-210ENST00000479440 GJC2Q5T442 439 aaPredicted RBP19.67■□□□□ 0.74
DDX56-210ENST00000479440 TRMT2AQ8IZ69 625 aaKnown RBP19.67■□□□□ 0.74
DDX56-210ENST00000479440 BTBD7Q9P203 1132 aa19.67■□□□□ 0.74
DDX56-210ENST00000479440 SERPINB13Q9UIV8 391 aa19.67■□□□□ 0.74
DDX56-210ENST00000479440 PNMA6EA0A0J9YXQ4 647 aa19.66■□□□□ 0.74
DDX56-210ENST00000479440 SPDYE16A6NNV3 312 aaPredicted RBP19.66■□□□□ 0.74
DDX56-210ENST00000479440 SHHQ15465 462 aa19.66■□□□□ 0.74
DDX56-210ENST00000479440 TNNI3KQ59H18 835 aa19.66■□□□□ 0.74
DDX56-210ENST00000479440 OLFML2BQ68BL8 750 aa19.66■□□□□ 0.74
DDX56-210ENST00000479440 SLC39A5Q6ZMH5 540 aa19.66■□□□□ 0.74
DDX56-210ENST00000479440 DPP9Q86TI2 863 aa19.66■□□□□ 0.74
DDX56-210ENST00000479440 TRPV1Q8NER1 839 aa19.66■□□□□ 0.74
DDX56-210ENST00000479440 SEMA6BQ9H3T3 888 aa19.66■□□□□ 0.74
DDX56-210ENST00000479440 RPAP3Q9H6T3 665 aaPredicted RBP19.66■□□□□ 0.74
DDX56-210ENST00000479440 CABP5Q9NP86 173 aa19.66■□□□□ 0.74
DDX56-210ENST00000479440 FPGT-TNNI3KV9GXZ4 949 aa19.66■□□□□ 0.74
DDX56-210ENST00000479440 TMEM265A0A087WTH1 108 aa19.65■□□□□ 0.74
DDX56-210ENST00000479440 FOSL2P15408 326 aa19.65■□□□□ 0.74
DDX56-210ENST00000479440 CYP7A1P22680 504 aa19.65■□□□□ 0.74
DDX56-210ENST00000479440 DYNLL1P63167 89 aaKnown RBP19.65■□□□□ 0.74
DDX56-210ENST00000479440 SNX17Q15036 470 aa19.65■□□□□ 0.74
DDX56-210ENST00000479440 ABCB5Q2M3G0 1257 aa19.65■□□□□ 0.74
DDX56-210ENST00000479440 TRIM60Q495X7 471 aa19.65■□□□□ 0.74
DDX56-210ENST00000479440 CERKLQ49MI3 558 aaPredicted RBP19.65■□□□□ 0.74
DDX56-210ENST00000479440 C9orf50Q5SZB4 431 aa19.65■□□□□ 0.74
DDX56-210ENST00000479440 TTC6Q86TZ1 520 aa19.65■□□□□ 0.74
DDX56-210ENST00000479440 SYMPKQ92797 1274 aaKnown RBP19.65■□□□□ 0.74
DDX56-210ENST00000479440 ZNF512BQ96KM6 892 aaPredicted RBP19.65■□□□□ 0.74
DDX56-210ENST00000479440 DBNDD2Q9BQY9 259 aa19.65■□□□□ 0.74
DDX56-210ENST00000479440 SLC5A4Q9NY91 659 aa19.65■□□□□ 0.74
DDX56-210ENST00000479440 SEPT4O43236 478 aa19.64■□□□□ 0.73
DDX56-210ENST00000479440 ADORA2AP29274 412 aa19.64■□□□□ 0.73
DDX56-210ENST00000479440 ZAP70P43403 619 aa19.64■□□□□ 0.73
DDX56-210ENST00000479440 RARSP54136 660 aaKnown RBP19.64■□□□□ 0.73
DDX56-210ENST00000479440 OS9Q13438 667 aaPredicted RBP19.64■□□□□ 0.73
DDX56-210ENST00000479440 MYLIPQ8WY64 445 aa19.64■□□□□ 0.73
DDX56-210ENST00000479440 BADQ92934 168 aa19.64■□□□□ 0.73
DDX56-210ENST00000479440 PRDM6Q9NQX0 595 aa19.64■□□□□ 0.73
DDX56-210ENST00000479440 PDLIM7Q9NR12 457 aa19.64■□□□□ 0.73
DDX56-210ENST00000479440 RLFQ13129 1914 aa19.64■□□□□ 0.73
DDX56-210ENST00000479440 MYH1P12882 1939 aa19.63■□□□□ 0.73
DDX56-210ENST00000479440 STRNO43815 780 aa19.63■□□□□ 0.73
DDX56-210ENST00000479440 IGHA2P01877 340 aa19.63■□□□□ 0.73
DDX56-210ENST00000479440 MYCNP04198 464 aaPredicted RBP19.63■□□□□ 0.73
DDX56-210ENST00000479440 ACER1Q8TDN7 264 aa19.63■□□□□ 0.73
DDX56-210ENST00000479440 PIH1D3Q9NQM4 214 aaKnown RBP19.63■□□□□ 0.73
DDX56-210ENST00000479440 A0A0G2JMZ2 1700 aa19.62■□□□□ 0.73
DDX56-210ENST00000479440 ZNF316A6NFI3 1004 aaPredicted RBP19.62■□□□□ 0.73
DDX56-210ENST00000479440 IPO8O15397 1037 aaKnown RBP19.62■□□□□ 0.73
DDX56-210ENST00000479440 IDH1O75874 414 aaKnown RBP19.62■□□□□ 0.73
DDX56-210ENST00000479440 C1orf53Q5VUE5 145 aa19.62■□□□□ 0.73
DDX56-210ENST00000479440 MIGA1Q8NAN2 632 aa19.62■□□□□ 0.73
DDX56-210ENST00000479440 SHCBP1Q8NEM2 672 aa19.62■□□□□ 0.73
DDX56-210ENST00000479440 TTYH1Q9H313 450 aaPredicted RBP19.62■□□□□ 0.73
DDX56-210ENST00000479440 ANO1Q5XXA6 986 aa19.61■□□□□ 0.73
DDX56-210ENST00000479440 TMED8Q6PL24 325 aaPredicted RBP19.61■□□□□ 0.73
DDX56-210ENST00000479440 MOV10L1Q9BXT6 1211 aaKnown RBP19.61■□□□□ 0.73
DDX56-210ENST00000479440 SPATC1LQ9H0A9 340 aa19.61■□□□□ 0.73
DDX56-210ENST00000479440 COG2Q14746 738 aa19.6■□□□□ 0.73
DDX56-210ENST00000479440 MB21D1Q8N884 522 aa19.6■□□□□ 0.73
DDX56-210ENST00000479440 RNPC3Q96LT9 517 aaKnown RBP19.6■□□□□ 0.73
DDX56-210ENST00000479440 TANGO6Q9C0B7 1094 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms