RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 GRIK5Q16478 980 aa8.58□□□□□ -1.04
HDAC3-206ENST00000471968 FAM47AQ5JRC9 791 aa8.58□□□□□ -1.04
HDAC3-206ENST00000471968 RNF135Q8IUD6 432 aa8.58□□□□□ -1.04
HDAC3-206ENST00000471968 FAM151AQ8WW52 585 aa8.58□□□□□ -1.04
HDAC3-206ENST00000471968 TEKT1Q969V4 418 aa8.58□□□□□ -1.04
HDAC3-206ENST00000471968 PTPRFP10586 1907 aa8.58□□□□□ -1.04
HDAC3-206ENST00000471968 SPEGQ15772 3267 aa8.57□□□□□ -1.04
HDAC3-206ENST00000471968 SEPT4O43236 478 aa8.57□□□□□ -1.04
HDAC3-206ENST00000471968 TAF5LO75529 589 aa8.57□□□□□ -1.04
HDAC3-206ENST00000471968 ARHGEF15O94989 841 aa8.57□□□□□ -1.04
HDAC3-206ENST00000471968 PCCAP05165 728 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-206ENST00000471968 HMGCS2P54868 508 aa8.57□□□□□ -1.04
HDAC3-206ENST00000471968 IRX3P78415 501 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-206ENST00000471968 Q3C1V9 767 aa8.57□□□□□ -1.04
HDAC3-206ENST00000471968 MCTP2Q6DN12 878 aa8.57□□□□□ -1.04
HDAC3-206ENST00000471968 TTLL11Q8NHH1 800 aa8.57□□□□□ -1.04
HDAC3-206ENST00000471968 GDPD5Q8WTR4 605 aa8.57□□□□□ -1.04
HDAC3-206ENST00000471968 FAM50BQ9Y247 325 aa8.57□□□□□ -1.04
HDAC3-206ENST00000471968 KNSTRNQ9Y448 316 aa8.57□□□□□ -1.04
HDAC3-206ENST00000471968 BPTFQ12830 3046 aa8.56□□□□□ -1.04
HDAC3-206ENST00000471968 SOBPA7XYQ1 873 aa8.56□□□□□ -1.04
HDAC3-206ENST00000471968 GALR2O43603 387 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-206ENST00000471968 ERVK-9P63128 1117 aa8.56□□□□□ -1.04
HDAC3-206ENST00000471968 ERVK-24P63145 666 aa8.56□□□□□ -1.04
HDAC3-206ENST00000471968 TAP1Q03518 808 aa8.56□□□□□ -1.04
HDAC3-206ENST00000471968 NBPF20Q3BBV1 942 aa8.56□□□□□ -1.04
HDAC3-206ENST00000471968 WDR78Q5VTH9 848 aa8.56□□□□□ -1.04
HDAC3-206ENST00000471968 APOBEC3HQ6NTF7 200 aaKnown RBP8.56□□□□□ -1.04
HDAC3-206ENST00000471968 C15orf52Q6ZUT6 534 aaKnown RBP8.56□□□□□ -1.04
HDAC3-206ENST00000471968 SPRED2Q7Z698 418 aa8.56□□□□□ -1.04
HDAC3-206ENST00000471968 NEK9Q8TD19 979 aa8.56□□□□□ -1.04
HDAC3-206ENST00000471968 MPHOSPH8Q99549 860 aa8.56□□□□□ -1.04
HDAC3-206ENST00000471968 DLL3Q9NYJ7 618 aa8.56□□□□□ -1.04
HDAC3-206ENST00000471968 CHPF2Q9P2E5 772 aa8.56□□□□□ -1.04
HDAC3-206ENST00000471968 LRRFIP2Q9Y608 721 aaKnown RBP8.56□□□□□ -1.04
HDAC3-206ENST00000471968 CYP2C18P33260 490 aa8.55□□□□□ -1.04
HDAC3-206ENST00000471968 SPP2Q13103 211 aa8.55□□□□□ -1.04
HDAC3-206ENST00000471968 NPLOC4Q8TAT6 608 aa8.55□□□□□ -1.04
HDAC3-206ENST00000471968 ZDHHC15Q96MV8 337 aa8.55□□□□□ -1.04
HDAC3-206ENST00000471968 PAGR1Q9BTK6 254 aa8.55□□□□□ -1.04
HDAC3-206ENST00000471968 STARD7Q9NQZ5 370 aa8.55□□□□□ -1.04
HDAC3-206ENST00000471968 LMCD1Q9NZU5 365 aa8.55□□□□□ -1.04
HDAC3-206ENST00000471968 RBPJLQ9UBG7 517 aa8.55□□□□□ -1.04
HDAC3-206ENST00000471968 TSPYL4Q9UJ04 414 aa8.55□□□□□ -1.04
HDAC3-206ENST00000471968 COL4A4P53420 1690 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-206ENST00000471968 GLRX3O76003 335 aaKnown RBP8.54□□□□□ -1.04
HDAC3-206ENST00000471968 PGK1P00558 417 aa8.54□□□□□ -1.04
HDAC3-206ENST00000471968 HERVK_113P62684 666 aa8.54□□□□□ -1.04
HDAC3-206ENST00000471968 ZXDAP98168 799 aa8.54□□□□□ -1.04
HDAC3-206ENST00000471968 HDLBPQ00341 1268 aaKnown RBP8.54□□□□□ -1.04
HDAC3-206ENST00000471968 NCBP3Q53F19 620 aaKnown RBP8.54□□□□□ -1.04
HDAC3-206ENST00000471968 PRAMEF19Q5SWL8 479 aa8.54□□□□□ -1.04
HDAC3-206ENST00000471968 EP400NLQ6ZTU2 488 aa8.54□□□□□ -1.04
HDAC3-206ENST00000471968 RNF180Q86T96 592 aa8.54□□□□□ -1.04
HDAC3-206ENST00000471968 POP1Q99575 1024 aaKnown RBP8.54□□□□□ -1.04
HDAC3-206ENST00000471968 MYD88Q99836 296 aa8.54□□□□□ -1.04
HDAC3-206ENST00000471968 XPNPEP3Q9NQH7 507 aa8.54□□□□□ -1.04
HDAC3-206ENST00000471968 PHIPQ8WWQ0 1821 aa8.54□□□□□ -1.04
HDAC3-206ENST00000471968 ZZEF1O43149 2961 aa8.54□□□□□ -1.04
HDAC3-206ENST00000471968 SLC4A2P04920 1241 aa8.53□□□□□ -1.04
HDAC3-206ENST00000471968 HOXC6P09630 235 aa8.53□□□□□ -1.04
HDAC3-206ENST00000471968 SLURP2P0DP57 97 aa8.53□□□□□ -1.04
HDAC3-206ENST00000471968 NUBP1P53384 320 aa8.53□□□□□ -1.04
HDAC3-206ENST00000471968 NFIAQ12857 509 aa8.53□□□□□ -1.04
HDAC3-206ENST00000471968 COL9A3Q14050 684 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-206ENST00000471968 CCDC191Q8NCU4 936 aa8.53□□□□□ -1.04
HDAC3-206ENST00000471968 CWC25Q9NXE8 425 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-206ENST00000471968 SLC15A5A6NIM6 579 aa8.52□□□□□ -1.05
HDAC3-206ENST00000471968 CTNND1O60716 968 aaKnown RBP8.52□□□□□ -1.05
HDAC3-206ENST00000471968 PTPREP23469 700 aa8.52□□□□□ -1.05
HDAC3-206ENST00000471968 DMWDQ09019 674 aa8.52□□□□□ -1.05
HDAC3-206ENST00000471968 RSPO4Q2I0M5 234 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-206ENST00000471968 ZFPM1Q8IX07 1006 aa8.52□□□□□ -1.05
HDAC3-206ENST00000471968 ZNF280CQ8ND82 737 aa8.52□□□□□ -1.05
HDAC3-206ENST00000471968 KCNG4Q8TDN1 519 aa8.52□□□□□ -1.05
HDAC3-206ENST00000471968 NUP133Q8WUM0 1156 aa8.52□□□□□ -1.05
HDAC3-206ENST00000471968 LOC285556D6RIA3 1793 aa8.52□□□□□ -1.05
HDAC3-206ENST00000471968 MROH7Q68CQ1 1323 aa8.52□□□□□ -1.05
HDAC3-206ENST00000471968 SMG1Q96Q15 3661 aaKnown RBP8.51□□□□□ -1.05
HDAC3-206ENST00000471968 IGHA2P01877 340 aa8.51□□□□□ -1.05
HDAC3-206ENST00000471968 RARBP10826 455 aa8.51□□□□□ -1.05
HDAC3-206ENST00000471968 ITGA6P23229 1130 aa8.51□□□□□ -1.05
HDAC3-206ENST00000471968 CCL23P55773 120 aa8.51□□□□□ -1.05
HDAC3-206ENST00000471968 SIGLEC14Q08ET2 396 aa8.51□□□□□ -1.05
HDAC3-206ENST00000471968 CHAF1AQ13111 956 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-206ENST00000471968 LURAP1LQ8IV03 231 aa8.51□□□□□ -1.05
HDAC3-206ENST00000471968 ASIC4Q96FT7 647 aa8.51□□□□□ -1.05
HDAC3-206ENST00000471968 MTUS1Q9ULD2 1270 aa8.51□□□□□ -1.05
HDAC3-206ENST00000471968 IVNS1ABPQ9Y6Y0 642 aa8.51□□□□□ -1.05
HDAC3-206ENST00000471968 UMODL1Q5DID0 1318 aa8.51□□□□□ -1.05
HDAC3-206ENST00000471968 FRYQ5TBA9 3013 aa8.5□□□□□ -1.05
HDAC3-206ENST00000471968 CYSRT1A8MQ03 144 aa8.5□□□□□ -1.05
HDAC3-206ENST00000471968 PDGFBP01127 241 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-206ENST00000471968 GYG1P46976 350 aa8.5□□□□□ -1.05
HDAC3-206ENST00000471968 ACLYP53396 1101 aa8.5□□□□□ -1.05
HDAC3-206ENST00000471968 GRB14Q14449 540 aa8.5□□□□□ -1.05
HDAC3-206ENST00000471968 TTLL4Q14679 1199 aa8.5□□□□□ -1.05
HDAC3-206ENST00000471968 KIAA0319Q5VV43 1072 aa8.5□□□□□ -1.05
HDAC3-206ENST00000471968 DPP9Q86TI2 863 aa8.5□□□□□ -1.05
HDAC3-206ENST00000471968 HINFPQ9BQA5 517 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms