RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 CXorf67Q86X51 503 aaPredicted RBP-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 CILP2Q8IUL8 1156 aa-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 HACE1Q8IYU2 909 aa-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 PRSS33Q8NF86 280 aa-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 PARD3BQ8TEW8 1205 aa-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 U2AF1L4Q8WU68 220 aaKnown RBP-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 TCTN2Q96GX1 697 aa-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 DMRTB1Q96MA1 342 aa-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 AGAP2Q99490 1192 aa-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 ZCCHC3Q9NUD5 404 aaKnown RBP-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 TMEM39AQ9NV64 488 aa-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 LIMCH1Q9UPQ0 1083 aa-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 FNDC3AQ9Y2H6 1198 aaKnown RBP-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 ARIH1Q9Y4X5 557 aaPredicted RBP-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 PCDHB12Q9Y5F1 795 aa-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 SDK2Q58EX2 2172 aa-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 CNTNAP1P78357 1384 aa-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 USP31Q70CQ4 1352 aa-1.34□□□□□ -2.62
SNORD54-201ENST00000459159 A0A0J9YXV3 536 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 PRRT4C9JH25 899 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 LGALS9O00182 355 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 IGF2BP3O00425 579 aaKnown RBP eCLIP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 CYR61O00622 381 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 NUPL2O15504 423 aaKnown RBP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 AKAP8O43823 692 aaKnown RBP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 EFCAB14O75071 495 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 ABLIM3O94929 683 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 MYCNP04198 464 aaPredicted RBP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 DRD2P14416 443 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 TAL1P17542 331 aaPredicted RBP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 MZF1P28698 734 aaPredicted RBP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 PTGER1P34995 402 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 TNFRSF4P43489 277 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 HOXA1P49639 335 aaPredicted RBP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 NKX6-1P78426 367 aaPredicted RBP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 ADAM17P78536 824 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 TAGLNQ01995 201 aaKnown RBP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 CD300CQ08708 224 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 TARDBPQ13148 414 aaKnown RBP eCLIP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 NFATC2Q13469 925 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 PAN3Q58A45 887 aaKnown RBP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 ATAT1Q5SQI0 421 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 RSPH4AQ5TD94 716 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 FAM46CQ5VWP2 391 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 PKN3Q6P5Z2 889 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 FIP1L1Q6UN15 594 aaKnown RBP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 Q71RC1 249 aaPredicted RBP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 MTSS1LQ765P7 747 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 LRRC70Q7Z2Q7 622 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 WDFY1Q8IWB7 410 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 MB21D1Q8N884 522 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 SMRP1Q8NCR6 262 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 ASAP3Q8TDY4 903 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 ADAMTS15Q8TE58 950 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 ADAMTS19Q8TE59 1207 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 IFT74Q96LB3 600 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 KCNC2Q96PR1 638 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 PRR25Q96S07 402 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 DMRTA2Q96SC8 542 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 GAS2L1Q99501 681 aaPredicted RBP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 HMX1Q9NP08 348 aaPredicted RBP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 SEMA3GQ9NS98 782 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 FBXO34Q9NWN3 711 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 PPARGC1AQ9UBK2 798 aaKnown RBP-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 ARHGAP26Q9UNA1 814 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 HCN4Q9Y3Q4 1203 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 MRVI1Q9Y6F6 885 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 SPATA31D1Q6ZQQ2 1576 aa-1.35□□□□□ -2.63
SNORD54-201ENST00000459159 SLX4Q8IY92 1834 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 TANC2Q9HCD6 1990 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 CCDC78A2IDD5 438 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 PSDA5PKW4 1024 aaPredicted RBP-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 FIGNL2A6NMB9 653 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 B4E1Z4 1266 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 C11orf95C9JLR9 678 aaPredicted RBP-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 C19orf84I3L1E1 186 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 FOXE1O00358 373 aaPredicted RBP-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 NPC1O15118 1278 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 KIF1CO43896 1103 aaKnown RBP-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 CDK2AP2O75956 126 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 CAMTA2O94983 1202 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 PLGP00747 810 aaPredicted RBP-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 KRT6AP02538 564 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 KRT6BP04259 564 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 AMY1AP04745 511 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 AMY2AP04746 511 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 PLA2G2AP14555 144 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 TCF4P15884 667 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 CELP19835 753 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 TRHP20396 242 aaPredicted RBP-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 TNFAIP3P21580 790 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 IRS1P35568 1242 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 KRT6CP48668 564 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 GALK1P51570 392 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 BNC1Q01954 994 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 SCAPQ12770 1279 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 GRM1Q13255 1194 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 CDK5R2Q13319 367 aa-1.36□□□□□ -2.63
SNORD54-201ENST00000459159 PDE3BQ13370 1112 aa-1.36□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms