RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 SMARCE1Q969G3 411 aa22.99■■□□□ 1.27
CSPG5-203ENST00000456150 CCDC34Q96HJ3 373 aa22.99■■□□□ 1.27
CSPG5-203ENST00000456150 PHF20Q9BVI0 1012 aa22.99■■□□□ 1.27
CSPG5-203ENST00000456150 MAST2Q6P0Q8 1798 aa22.99■■□□□ 1.27
CSPG5-203ENST00000456150 TRIM75PA6NK02 468 aa22.98■■□□□ 1.27
CSPG5-203ENST00000456150 BMP15O95972 392 aa22.98■■□□□ 1.27
CSPG5-203ENST00000456150 GRIN1Q05586 938 aa22.98■■□□□ 1.27
CSPG5-203ENST00000456150 CFAP100Q494V2 611 aa22.98■■□□□ 1.27
CSPG5-203ENST00000456150 CTR9Q6PD62 1173 aa22.98■■□□□ 1.27
CSPG5-203ENST00000456150 TMED8Q6PL24 325 aaPredicted RBP22.98■■□□□ 1.27
CSPG5-203ENST00000456150 MLKLQ8NB16 471 aa22.98■■□□□ 1.27
CSPG5-203ENST00000456150 KIF18AQ8NI77 898 aa22.98■■□□□ 1.27
CSPG5-203ENST00000456150 BRMS1Q9HCU9 246 aa22.98■■□□□ 1.27
CSPG5-203ENST00000456150 SERTAD1Q9UHV2 236 aa22.98■■□□□ 1.27
CSPG5-203ENST00000456150 MAN1B1Q9UKM7 699 aa22.98■■□□□ 1.27
CSPG5-203ENST00000456150 WTIPA6NIX2 430 aaPredicted RBP22.97■■□□□ 1.27
CSPG5-203ENST00000456150 ZPR1O75312 459 aa22.97■■□□□ 1.27
CSPG5-203ENST00000456150 FUT2Q10981 343 aa22.97■■□□□ 1.27
CSPG5-203ENST00000456150 PKN1Q16512 942 aa22.97■■□□□ 1.27
CSPG5-203ENST00000456150 NSUN4Q96CB9 384 aaKnown RBP22.97■■□□□ 1.27
CSPG5-203ENST00000456150 ANKRD2Q9GZV1 360 aa22.97■■□□□ 1.27
CSPG5-203ENST00000456150 COL24A1Q17RW2 1714 aa22.97■■□□□ 1.27
CSPG5-203ENST00000456150 CCP110O43303 1012 aa22.97■■□□□ 1.27
CSPG5-203ENST00000456150 APBA3O96018 575 aa22.97■■□□□ 1.27
CSPG5-203ENST00000456150 TUBB4AP04350 444 aa22.97■■□□□ 1.27
CSPG5-203ENST00000456150 RPS8P62241 208 aaKnown RBP22.97■■□□□ 1.27
CSPG5-203ENST00000456150 NCBP1Q09161 790 aaKnown RBP22.97■■□□□ 1.27
CSPG5-203ENST00000456150 TRAPPC3LQ5T215 181 aa22.97■■□□□ 1.27
CSPG5-203ENST00000456150 E4F1Q66K89 784 aaPredicted RBP22.97■■□□□ 1.27
CSPG5-203ENST00000456150 CRNKL1Q9BZJ0 848 aaKnown RBP22.97■■□□□ 1.27
CSPG5-203ENST00000456150 VPS54Q9P1Q0 977 aa22.97■■□□□ 1.27
CSPG5-203ENST00000456150 CCDC88AQ3V6T2 1871 aa22.97■■□□□ 1.27
CSPG5-203ENST00000456150 CYP2D7A0A087X1C5 515 aa22.96■■□□□ 1.27
CSPG5-203ENST00000456150 FOXN1O15353 648 aa22.96■■□□□ 1.27
CSPG5-203ENST00000456150 ORC4O43929 436 aa22.96■■□□□ 1.27
CSPG5-203ENST00000456150 SARSP49591 514 aaKnown RBP22.96■■□□□ 1.27
CSPG5-203ENST00000456150 ZNF384Q8TF68 577 aa22.96■■□□□ 1.27
CSPG5-203ENST00000456150 NLRP3Q96P20 1036 aa22.96■■□□□ 1.27
CSPG5-203ENST00000456150 FANCLQ9NW38 375 aa22.96■■□□□ 1.27
CSPG5-203ENST00000456150 AATFQ9NY61 560 aaKnown RBP eCLIP22.96■■□□□ 1.27
CSPG5-203ENST00000456150 ATP2B1P20020 1258 aa22.96■■□□□ 1.27
CSPG5-203ENST00000456150 TROAPQ12815 778 aa22.96■■□□□ 1.27
CSPG5-203ENST00000456150 VSTM4Q8IW00 320 aa22.96■■□□□ 1.27
CSPG5-203ENST00000456150 CSRNP2Q9H175 543 aa22.96■■□□□ 1.27
CSPG5-203ENST00000456150 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.96■■□□□ 1.27
CSPG5-203ENST00000456150 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.95■■□□□ 1.26
CSPG5-203ENST00000456150 USP17L12C9JPN9 530 aa22.95■■□□□ 1.26
CSPG5-203ENST00000456150 USP17L21D6R901 530 aa22.95■■□□□ 1.26
CSPG5-203ENST00000456150 SMIM22K7EJ46 135 aa22.95■■□□□ 1.26
CSPG5-203ENST00000456150 ACTN4O43707 911 aaKnown RBP22.95■■□□□ 1.26
CSPG5-203ENST00000456150 BMP6P22004 513 aa22.95■■□□□ 1.26
CSPG5-203ENST00000456150 HIBADHP31937 336 aaKnown RBP22.95■■□□□ 1.26
CSPG5-203ENST00000456150 RFC4P35249 363 aa22.95■■□□□ 1.26
CSPG5-203ENST00000456150 MECOMQ03112 1051 aa22.95■■□□□ 1.26
CSPG5-203ENST00000456150 MORC3Q14149 939 aa22.95■■□□□ 1.26
CSPG5-203ENST00000456150 PPP1R13BQ96KQ4 1090 aa22.95■■□□□ 1.26
CSPG5-203ENST00000456150 ATP8A2Q9NTI2 1148 aa22.95■■□□□ 1.26
CSPG5-203ENST00000456150 UBR3Q6ZT12 1888 aa22.95■■□□□ 1.26
CSPG5-203ENST00000456150 PRDM1O75626 825 aa22.94■■□□□ 1.26
CSPG5-203ENST00000456150 PDE4BQ07343 736 aa22.94■■□□□ 1.26
CSPG5-203ENST00000456150 TMTC3Q6ZXV5 915 aa22.94■■□□□ 1.26
CSPG5-203ENST00000456150 DPF2Q92785 391 aa22.94■■□□□ 1.26
CSPG5-203ENST00000456150 SETDB2Q96T68 719 aa22.94■■□□□ 1.26
CSPG5-203ENST00000456150 ARID3AQ99856 593 aa22.94■■□□□ 1.26
CSPG5-203ENST00000456150 V9GY48 417 aaPredicted RBP22.94■■□□□ 1.26
CSPG5-203ENST00000456150 PLEKHA8P1O95397 391 aa22.94■■□□□ 1.26
CSPG5-203ENST00000456150 PRR29P0C7W0 189 aa22.94■■□□□ 1.26
CSPG5-203ENST00000456150 TOP1P11387 765 aaKnown RBP22.94■■□□□ 1.26
CSPG5-203ENST00000456150 ENOX1Q8TC92 643 aaKnown RBP22.94■■□□□ 1.26
CSPG5-203ENST00000456150 FERMT2Q96AC1 680 aa22.94■■□□□ 1.26
CSPG5-203ENST00000456150 ARPP21Q9UBL0 812 aaPredicted RBP22.94■■□□□ 1.26
CSPG5-203ENST00000456150 PPP4R3BQ5MIZ7 849 aa22.93■■□□□ 1.26
CSPG5-203ENST00000456150 NBPF5PQ86XG9 351 aaPredicted RBP22.93■■□□□ 1.26
CSPG5-203ENST00000456150 CTCFLQ8NI51 663 aaPredicted RBP22.93■■□□□ 1.26
CSPG5-203ENST00000456150 SHISA4Q96DD7 197 aa22.93■■□□□ 1.26
CSPG5-203ENST00000456150 DCP1AQ9NPI6 582 aaPredicted RBP22.93■■□□□ 1.26
CSPG5-203ENST00000456150 PLSCR1O15162 318 aa22.92■■□□□ 1.26
CSPG5-203ENST00000456150 ZBTB22O15209 634 aa22.92■■□□□ 1.26
CSPG5-203ENST00000456150 CT47A1Q5JQC4 288 aaPredicted RBP22.92■■□□□ 1.26
CSPG5-203ENST00000456150 PDILTQ8N807 584 aa22.92■■□□□ 1.26
CSPG5-203ENST00000456150 SPATA20Q8TB22 786 aa22.92■■□□□ 1.26
CSPG5-203ENST00000456150 CNTNAP5Q8WYK1 1306 aa22.92■■□□□ 1.26
CSPG5-203ENST00000456150 KIAA1551Q9HCM1 1747 aa22.92■■□□□ 1.26
CSPG5-203ENST00000456150 KLRK1P26718 216 aa22.91■■□□□ 1.26
CSPG5-203ENST00000456150 SBK1Q52WX2 424 aa22.91■■□□□ 1.26
CSPG5-203ENST00000456150 CGNQ9P2M7 1197 aaKnown RBP22.91■■□□□ 1.26
CSPG5-203ENST00000456150 TMX1Q9H3N1 280 aa22.91■■□□□ 1.26
CSPG5-203ENST00000456150 NFE2L3Q9Y4A8 694 aa22.91■■□□□ 1.26
CSPG5-203ENST00000456150 TNS1Q9HBL0 1735 aaKnown RBP22.9■■□□□ 1.26
CSPG5-203ENST00000456150 FAM205CA6NFA0 338 aa22.9■■□□□ 1.26
CSPG5-203ENST00000456150 NT5C2P49902 561 aa22.9■■□□□ 1.26
CSPG5-203ENST00000456150 TPTE2Q6XPS3 522 aa22.9■■□□□ 1.26
CSPG5-203ENST00000456150 FCHSD1Q86WN1 690 aa22.9■■□□□ 1.26
CSPG5-203ENST00000456150 CCDC24Q8N4L8 307 aa22.9■■□□□ 1.26
CSPG5-203ENST00000456150 hCG_1642624A0A1W2PR95 340 aa22.89■■□□□ 1.26
CSPG5-203ENST00000456150 ZNF18P17022 549 aa22.89■■□□□ 1.26
CSPG5-203ENST00000456150 CDK11BP21127 795 aaKnown RBP22.89■■□□□ 1.26
CSPG5-203ENST00000456150 ERCC5P28715 1186 aaPredicted RBP22.89■■□□□ 1.26
CSPG5-203ENST00000456150 PLCD1P51178 756 aa22.89■■□□□ 1.26
CSPG5-203ENST00000456150 SPTY2D1Q68D10 685 aaPredicted RBP22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms