RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 SPTBN2O15020 2390 aa7.15□□□□□ -1.27
SBDSP1-204ENST00000453858 WNT7AO00755 349 aa7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 WDHD1O75717 1129 aaPredicted RBP7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 DGAT1O75907 488 aa7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 COL4A1P02462 1669 aa7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 HCLS1P14317 486 aaPredicted RBP7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 EPHB4P54760 987 aa7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 FCGRTP55899 365 aa7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 MOGSQ13724 837 aa7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 VGLL4Q14135 290 aa7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 LTBP2Q14767 1821 aa7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 ANKRD36CQ5JPF3 1778 aa7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 HDGFL1Q5TGJ6 251 aa7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 TTLL7Q6ZT98 887 aa7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 DDX60Q8IY21 1712 aaKnown RBP7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 CELF1Q92879 486 aaKnown RBP7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 FOXJ1Q92949 421 aa7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 GAS2L1Q99501 681 aaPredicted RBP7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 PPP2R3BQ9Y5P8 575 aa7.14□□□□□ -1.27
SBDSP1-204ENST00000453858 EP300Q09472 2414 aaPredicted RBP7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 PRRC2BQ5JSZ5 2229 aaKnown RBP7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 ZNF804BA4D1E1 1349 aa7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 MAGEB6P1A0A0J9YX57 407 aa7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 MED19A0JLT2 244 aaPredicted RBP7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 SNRPA1P09661 255 aaKnown RBP7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 NBPF20Q3BBV1 942 aa7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 PPP1R42Q7Z4L9 355 aa7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 OGFOD1Q8N543 542 aa7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 EHBP1Q8NDI1 1231 aa7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 PRSS33Q8NF86 280 aa7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 GLMNQ92990 594 aa7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 CCDC97Q96F63 343 aaPredicted RBP7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 CNTNAP3BQ96NU0 1288 aa7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 UIMC1Q96RL1 719 aa7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 OCSTAMPQ9BR26 566 aa7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 CNTNAP3Q9BZ76 1288 aa7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 ALG13Q9NP73 1137 aaKnown RBP7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 SIPA1L3O60292 1781 aaPredicted RBP7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 HELZ2Q9BYK8 2649 aaKnown RBP7.13□□□□□ -1.27
SBDSP1-204ENST00000453858 CEP250Q9BV73 2442 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 CEMIPQ8WUJ3 1361 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 AOX1Q06278 1338 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 OTOFQ9HC10 1997 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 POM121CA8CG34 1229 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 GDF9O60383 454 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 SKOR1P84550 965 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 MAP3K21Q5TCX8 1036 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 RNF20Q5VTR2 975 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 ZNF787Q6DD87 383 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 BADQ92934 168 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 TIFAQ96CG3 184 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 UTP14AQ9BVJ6 771 aaKnown RBP7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 CARD11Q9BXL7 1154 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 MAP4K5Q9Y4K4 846 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 PCDHB9Q9Y5E1 797 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 MGAMO43451 1857 aa7.12□□□□□ -1.27
SBDSP1-204ENST00000453858 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.11□□□□□ -1.27
SBDSP1-204ENST00000453858 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.11□□□□□ -1.27
SBDSP1-204ENST00000453858 PDHXO00330 501 aa7.11□□□□□ -1.27
SBDSP1-204ENST00000453858 TCF15Q12870 199 aa7.11□□□□□ -1.27
SBDSP1-204ENST00000453858 PARP10Q53GL7 1025 aa7.11□□□□□ -1.27
SBDSP1-204ENST00000453858 ANKRD23Q86SG2 305 aa7.11□□□□□ -1.27
SBDSP1-204ENST00000453858 TEPSINQ96N21 525 aa7.11□□□□□ -1.27
SBDSP1-204ENST00000453858 CDK15Q96Q40 435 aa7.11□□□□□ -1.27
SBDSP1-204ENST00000453858 PCDHAC2Q9Y5I4 1007 aa7.11□□□□□ -1.27
SBDSP1-204ENST00000453858 DSPP15924 2871 aaKnown RBP7.11□□□□□ -1.27
SBDSP1-204ENST00000453858 LOC400499M0QZD8 3231 aa7.1□□□□□ -1.27
SBDSP1-204ENST00000453858 USP9XQ93008 2570 aaPredicted RBP7.1□□□□□ -1.27
SBDSP1-204ENST00000453858 LZTS3O60299 673 aaPredicted RBP7.1□□□□□ -1.27
SBDSP1-204ENST00000453858 SNAPC2Q13487 334 aa7.1□□□□□ -1.27
SBDSP1-204ENST00000453858 RASA3Q14644 834 aa7.1□□□□□ -1.27
SBDSP1-204ENST00000453858 ACAP1Q15027 740 aa7.1□□□□□ -1.27
SBDSP1-204ENST00000453858 PKDCCQ504Y2 493 aa7.1□□□□□ -1.27
SBDSP1-204ENST00000453858 C4orf48Q5BLP8 95 aa7.1□□□□□ -1.27
SBDSP1-204ENST00000453858 HFE2Q6ZVN8 426 aa7.1□□□□□ -1.27
SBDSP1-204ENST00000453858 HERVK_113Q902F9 699 aa7.1□□□□□ -1.27
SBDSP1-204ENST00000453858 CEP126Q9P2H0 1117 aa7.1□□□□□ -1.27
SBDSP1-204ENST00000453858 GJD2Q9UKL4 321 aa7.1□□□□□ -1.27
SBDSP1-204ENST00000453858 RALYQ9UKM9 306 aaKnown RBP7.1□□□□□ -1.27
SBDSP1-204ENST00000453858 SNCAIPQ9Y6H5 919 aa7.1□□□□□ -1.27
SBDSP1-204ENST00000453858 TRIM43BA6NCK2 446 aa7.09□□□□□ -1.27
SBDSP1-204ENST00000453858 BTBD11A6QL63 1104 aa7.09□□□□□ -1.27
SBDSP1-204ENST00000453858 HMGCRP04035 888 aa7.09□□□□□ -1.27
SBDSP1-204ENST00000453858 IGFBP4P22692 258 aa7.09□□□□□ -1.27
SBDSP1-204ENST00000453858 ID4P47928 161 aa7.09□□□□□ -1.27
SBDSP1-204ENST00000453858 TEFQ10587 303 aa7.09□□□□□ -1.27
SBDSP1-204ENST00000453858 SF3B3Q15393 1217 aaKnown RBP7.09□□□□□ -1.27
SBDSP1-204ENST00000453858 SLFNL1Q499Z3 407 aa7.09□□□□□ -1.27
SBDSP1-204ENST00000453858 STRIP1Q5VSL9 837 aa7.09□□□□□ -1.27
SBDSP1-204ENST00000453858 GPAT2Q6NUI2 795 aa7.09□□□□□ -1.27
SBDSP1-204ENST00000453858 ERO1BQ86YB8 467 aa7.09□□□□□ -1.27
SBDSP1-204ENST00000453858 TRIM43Q96BQ3 446 aaPredicted RBP7.09□□□□□ -1.27
SBDSP1-204ENST00000453858 RNPC3Q96LT9 517 aaKnown RBP7.09□□□□□ -1.27
SBDSP1-204ENST00000453858 PBX4Q9BYU1 374 aa7.09□□□□□ -1.27
SBDSP1-204ENST00000453858 MAST2Q6P0Q8 1798 aa7.08□□□□□ -1.28
SBDSP1-204ENST00000453858 LRRC37A2A6NM11 1700 aa7.08□□□□□ -1.28
SBDSP1-204ENST00000453858 SIAH2O43255 324 aa7.08□□□□□ -1.28
SBDSP1-204ENST00000453858 UFL1O94874 794 aa7.08□□□□□ -1.28
SBDSP1-204ENST00000453858 ALADP13716 330 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms