RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TMOD4Q9NZQ9 345 aa16.89■□□□□ 0.29
RTFDC1-204ENST00000449062 ZBTB47Q9UFB7 747 aaPredicted RBP16.89■□□□□ 0.29
RTFDC1-204ENST00000449062 PNMA3Q9UL41 463 aa16.89■□□□□ 0.29
RTFDC1-204ENST00000449062 ATAD5Q96QE3 1844 aa16.89■□□□□ 0.29
RTFDC1-204ENST00000449062 MYH7P12883 1935 aa16.88■□□□□ 0.29
RTFDC1-204ENST00000449062 AKR1B1P15121 316 aa16.88■□□□□ 0.29
RTFDC1-204ENST00000449062 GNAT2P19087 354 aa16.88■□□□□ 0.29
RTFDC1-204ENST00000449062 FAM110CQ1W6H9 321 aa16.88■□□□□ 0.29
RTFDC1-204ENST00000449062 ANKRD13CQ8N6S4 541 aa16.88■□□□□ 0.29
RTFDC1-204ENST00000449062 SMCR8Q8TEV9 937 aaPredicted RBP16.88■□□□□ 0.29
RTFDC1-204ENST00000449062 CCDC17Q96LX7 622 aa16.88■□□□□ 0.29
RTFDC1-204ENST00000449062 FSD1Q9BTV5 496 aa16.88■□□□□ 0.29
RTFDC1-204ENST00000449062 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.88■□□□□ 0.29
RTFDC1-204ENST00000449062 RBPJLQ9UBG7 517 aa16.88■□□□□ 0.29
RTFDC1-204ENST00000449062 MORF4L1Q9UBU8 362 aa16.88■□□□□ 0.29
RTFDC1-204ENST00000449062 LOC285556D6RIA3 1793 aa16.87■□□□□ 0.29
RTFDC1-204ENST00000449062 FMNL1O95466 1100 aaPredicted RBP16.87■□□□□ 0.29
RTFDC1-204ENST00000449062 SOX10P56693 466 aa16.87■□□□□ 0.29
RTFDC1-204ENST00000449062 IRX6P78412 446 aaPredicted RBP16.87■□□□□ 0.29
RTFDC1-204ENST00000449062 TMEM179Q6ZVK1 233 aa16.87■□□□□ 0.29
RTFDC1-204ENST00000449062 IFNL3Q8IZI9 196 aa16.87■□□□□ 0.29
RTFDC1-204ENST00000449062 DDRGK1Q96HY6 314 aa16.87■□□□□ 0.29
RTFDC1-204ENST00000449062 ZNF333Q96JL9 665 aa16.87■□□□□ 0.29
RTFDC1-204ENST00000449062 TXNRD2Q9NNW7 524 aa16.87■□□□□ 0.29
RTFDC1-204ENST00000449062 ARPP21Q9UBL0 812 aaPredicted RBP16.87■□□□□ 0.29
RTFDC1-204ENST00000449062 BAZ2AQ9UIF9 1905 aaKnown RBP16.86■□□□□ 0.29
RTFDC1-204ENST00000449062 ECM2O94769 699 aaPredicted RBP16.86■□□□□ 0.29
RTFDC1-204ENST00000449062 HOXD10P28358 340 aa16.86■□□□□ 0.29
RTFDC1-204ENST00000449062 USP14P54578 494 aa16.86■□□□□ 0.29
RTFDC1-204ENST00000449062 HERVK_113P62684 666 aa16.86■□□□□ 0.29
RTFDC1-204ENST00000449062 KIAA1755Q5JYT7 1200 aa16.86■□□□□ 0.29
RTFDC1-204ENST00000449062 CATSPERGQ6ZRH7 1159 aa16.86■□□□□ 0.29
RTFDC1-204ENST00000449062 ZSWIM8A7E2V4 1837 aa16.86■□□□□ 0.29
RTFDC1-204ENST00000449062 PDE4DIPQ5VU43 2346 aa16.86■□□□□ 0.29
RTFDC1-204ENST00000449062 NAV1Q8NEY1 1877 aa16.86■□□□□ 0.29
RTFDC1-204ENST00000449062 USP17L15C9J2P7 530 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 USP17L13C9JLJ4 530 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 USP17L11C9JVI0 530 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 USP17L18D6R9N7 530 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 USP17L22D6RA61 530 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 USP17L17D6RBQ6 530 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 USP17L19D6RCP7 530 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 USP17L20D6RJB6 530 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 PEX10O60683 326 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 RASA1P20936 1047 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 FCGRTP55899 365 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 USP17L24Q0WX57 530 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 Q3C1V9 767 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 GJD2Q9UKL4 321 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 GABRQQ9UN88 632 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 TMX2Q9Y320 296 aa16.85■□□□□ 0.29
RTFDC1-204ENST00000449062 DOCK3Q8IZD9 2030 aa16.84■□□□□ 0.29
RTFDC1-204ENST00000449062 MPHOSPH10O00566 681 aaKnown RBP16.84■□□□□ 0.29
RTFDC1-204ENST00000449062 VCAM1P19320 739 aa16.84■□□□□ 0.29
RTFDC1-204ENST00000449062 IRX3P78415 501 aaPredicted RBP16.84■□□□□ 0.29
RTFDC1-204ENST00000449062 PRKCZQ05513 592 aa16.84■□□□□ 0.29
RTFDC1-204ENST00000449062 ZYXQ15942 572 aaKnown RBP16.84■□□□□ 0.29
RTFDC1-204ENST00000449062 CCDC129Q6ZRS4 1044 aa16.84■□□□□ 0.29
RTFDC1-204ENST00000449062 CLEC10AQ8IUN9 316 aa16.84■□□□□ 0.29
RTFDC1-204ENST00000449062 AMOTL1Q8IY63 956 aa16.84■□□□□ 0.29
RTFDC1-204ENST00000449062 HELLSQ9NRZ9 838 aa16.84■□□□□ 0.29
RTFDC1-204ENST00000449062 ROBO3Q96MS0 1386 aa16.84■□□□□ 0.29
RTFDC1-204ENST00000449062 MINDY4BA8MYZ0 360 aa16.83■□□□□ 0.28
RTFDC1-204ENST00000449062 CNMDO75829 334 aa16.83■□□□□ 0.28
RTFDC1-204ENST00000449062 PDE4AP27815 886 aa16.83■□□□□ 0.28
RTFDC1-204ENST00000449062 LBX2Q6XYB7 198 aa16.83■□□□□ 0.28
RTFDC1-204ENST00000449062 SH3TC2Q8TF17 1288 aa16.83■□□□□ 0.28
RTFDC1-204ENST00000449062 FAM227BQ96M60 508 aa16.83■□□□□ 0.28
RTFDC1-204ENST00000449062 FEZ1Q99689 392 aa16.83■□□□□ 0.28
RTFDC1-204ENST00000449062 KANSL2Q9H9L4 492 aa16.83■□□□□ 0.28
RTFDC1-204ENST00000449062 MYPNQ86TC9 1320 aa16.82■□□□□ 0.28
RTFDC1-204ENST00000449062 IGKV6D-41A0A0C4DH26 115 aa16.82■□□□□ 0.28
RTFDC1-204ENST00000449062 POTEFA5A3E0 1075 aa16.82■□□□□ 0.28
RTFDC1-204ENST00000449062 APPP05067 770 aa16.82■□□□□ 0.28
RTFDC1-204ENST00000449062 FLT3LGP49771 235 aa16.82■□□□□ 0.28
RTFDC1-204ENST00000449062 MLLT1Q03111 559 aaPredicted RBP16.82■□□□□ 0.28
RTFDC1-204ENST00000449062 IRF5Q13568 498 aa16.82■□□□□ 0.28
RTFDC1-204ENST00000449062 ALX1Q15699 326 aa16.82■□□□□ 0.28
RTFDC1-204ENST00000449062 SLC9C1Q4G0N8 1177 aa16.82■□□□□ 0.28
RTFDC1-204ENST00000449062 VPS53Q5VIR6 699 aa16.82■□□□□ 0.28
RTFDC1-204ENST00000449062 NBPF11Q86T75 865 aa16.82■□□□□ 0.28
RTFDC1-204ENST00000449062 GPRC5AQ8NFJ5 357 aa16.82■□□□□ 0.28
RTFDC1-204ENST00000449062 TACC3Q9Y6A5 838 aa16.82■□□□□ 0.28
RTFDC1-204ENST00000449062 BRCA2P51587 3418 aa16.82■□□□□ 0.28
RTFDC1-204ENST00000449062 A0A0D9SFI3 127 aa16.81■□□□□ 0.28
RTFDC1-204ENST00000449062 TNPO2O14787 897 aaKnown RBP16.81■□□□□ 0.28
RTFDC1-204ENST00000449062 EEF2P13639 858 aaKnown RBP16.81■□□□□ 0.28
RTFDC1-204ENST00000449062 GRK4P32298 578 aa16.81■□□□□ 0.28
RTFDC1-204ENST00000449062 TDO2P48775 406 aa16.81■□□□□ 0.28
RTFDC1-204ENST00000449062 ICA1Q05084 483 aa16.81■□□□□ 0.28
RTFDC1-204ENST00000449062 NACAP1Q9BZK3 213 aa16.81■□□□□ 0.28
RTFDC1-204ENST00000449062 RPAP3Q9H6T3 665 aaPredicted RBP16.81■□□□□ 0.28
RTFDC1-204ENST00000449062 RABGAP1Q9Y3P9 1069 aa16.81■□□□□ 0.28
RTFDC1-204ENST00000449062 TNRC18O15417 2968 aaPredicted RBP16.81■□□□□ 0.28
RTFDC1-204ENST00000449062 SDSP20132 328 aa16.8■□□□□ 0.28
RTFDC1-204ENST00000449062 ERVK-9P63128 1117 aa16.8■□□□□ 0.28
RTFDC1-204ENST00000449062 ERVK-24P63145 666 aa16.8■□□□□ 0.28
RTFDC1-204ENST00000449062 NMIQ13287 307 aaPredicted RBP16.8■□□□□ 0.28
RTFDC1-204ENST00000449062 MCMDC2Q4G0Z9 681 aa16.8■□□□□ 0.28
RTFDC1-204ENST00000449062 RAET1EQ8TD07 263 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms