RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 ZNF213O14771 459 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 PPFIA3O75145 1194 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 RPS6KA5O75582 802 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 ZNF18P17022 549 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 ACTN2P35609 894 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 LMAN1P49257 510 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 METAP2P50579 478 aaKnown RBP eCLIP9.59□□□□□ -0.87
CPSF7-206ENST00000448745 ANTXR2P58335 489 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 WASHC4Q2M389 1173 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 KRT40Q6A162 431 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 TTLL5Q6EMB2 1281 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 KANK3Q6NY19 840 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 TPTE2Q6XPS3 522 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 TOGARAM2Q6ZUX3 1019 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 KRI1Q8N9T8 703 aaKnown RBP9.59□□□□□ -0.87
CPSF7-206ENST00000448745 TTLL11Q8NHH1 800 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 WASF1Q92558 559 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 NYXQ9GZU5 481 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 MAN1B1Q9UKM7 699 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 RAB21Q9UL25 225 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 AKAP2Q9Y2D5 859 aa9.59□□□□□ -0.87
CPSF7-206ENST00000448745 A0A1B0GUL7 405 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 KLRG2A4D1S0 409 aaPredicted RBP9.58□□□□□ -0.88
CPSF7-206ENST00000448745 PDE8AO60658 829 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 ZBTB7AO95365 584 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 ERCC5P28715 1186 aaPredicted RBP9.58□□□□□ -0.88
CPSF7-206ENST00000448745 TNNT3P45378 269 aaPredicted RBP9.58□□□□□ -0.88
CPSF7-206ENST00000448745 PLCD1P51178 756 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 GOLGA8FQ08AF8 430 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 GOLGA8DPQ0D2H9 430 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 POSTNQ15063 836 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 NT5DC1Q5TFE4 455 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 PPFIBP1Q86W92 1011 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 CNBD1Q8NA66 436 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 OSBP2Q969R2 916 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 CCDC51Q96ER9 411 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 TRERF1Q96PN7 1200 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 MTFR1LQ9H019 292 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 GPHNQ9NQX3 736 aaPredicted RBP9.58□□□□□ -0.88
CPSF7-206ENST00000448745 CDC23Q9UJX2 597 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 FBXO3Q9UK99 471 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 ADAM21Q9UKJ8 722 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 ANGEL1Q9UNK9 670 aaKnown RBP9.58□□□□□ -0.88
CPSF7-206ENST00000448745 NFE2L3Q9Y4A8 694 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 PCDHA5Q9Y5H7 936 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 KIF13BQ9NQT8 1826 aa9.58□□□□□ -0.88
CPSF7-206ENST00000448745 MYO1CO00159 1063 aa9.57□□□□□ -0.88
CPSF7-206ENST00000448745 SH2B2O14492 632 aaPredicted RBP9.57□□□□□ -0.88
CPSF7-206ENST00000448745 PTGER2P43116 358 aa9.57□□□□□ -0.88
CPSF7-206ENST00000448745 CTSWP56202 376 aa9.57□□□□□ -0.88
CPSF7-206ENST00000448745 HAND2P61296 217 aa9.57□□□□□ -0.88
CPSF7-206ENST00000448745 KARSQ15046 597 aaKnown RBP9.57□□□□□ -0.88
CPSF7-206ENST00000448745 SF3B3Q15393 1217 aaKnown RBP9.57□□□□□ -0.88
CPSF7-206ENST00000448745 SAFBQ15424 915 aaKnown RBP eCLIP9.57□□□□□ -0.88
CPSF7-206ENST00000448745 WHAMMP3Q1A5X7 153 aa9.57□□□□□ -0.88
CPSF7-206ENST00000448745 LONRF3Q496Y0 759 aa9.57□□□□□ -0.88
CPSF7-206ENST00000448745 CRY2Q49AN0 593 aa9.57□□□□□ -0.88
CPSF7-206ENST00000448745 SRLQ86TD4 932 aa9.57□□□□□ -0.88
CPSF7-206ENST00000448745 TMEM87BQ96K49 555 aa9.57□□□□□ -0.88
CPSF7-206ENST00000448745 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.57□□□□□ -0.88
CPSF7-206ENST00000448745 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.57□□□□□ -0.884e-7■■■□□ 16.7
CPSF7-206ENST00000448745 EPC1Q9H2F5 836 aa9.57□□□□□ -0.88
CPSF7-206ENST00000448745 CEP126Q9P2H0 1117 aa9.57□□□□□ -0.88
CPSF7-206ENST00000448745 MKRN1Q9UHC7 482 aaKnown RBP9.57□□□□□ -0.88
CPSF7-206ENST00000448745 COL11A2P13942 1736 aaPredicted RBP9.57□□□□□ -0.88
CPSF7-206ENST00000448745 RTL9Q8NET4 1388 aa9.57□□□□□ -0.88
CPSF7-206ENST00000448745 TIAM2Q8IVF5 1701 aa9.57□□□□□ -0.88
CPSF7-206ENST00000448745 KIAA1551Q9HCM1 1747 aa9.57□□□□□ -0.88
CPSF7-206ENST00000448745 A0A1B0GTH6 734 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 VGLL3A8MV65 326 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 H3BQF6 201 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 FGAP02671 866 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 IARSP41252 1262 aaKnown RBP9.56□□□□□ -0.88
CPSF7-206ENST00000448745 ADKP55263 362 aaKnown RBP9.56□□□□□ -0.88
CPSF7-206ENST00000448745 TIMM10P62072 90 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 PDE4BQ07343 736 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 MORC3Q14149 939 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 NR1I3Q14994 352 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 FILIP1LQ4L180 1135 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 ZNF579Q8NAF0 562 aaKnown RBP9.56□□□□□ -0.88
CPSF7-206ENST00000448745 FAM71BQ8TC56 605 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 GREM2Q9H772 168 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 ZCCHC17Q9NP64 241 aaKnown RBP9.56□□□□□ -0.88
CPSF7-206ENST00000448745 TTF2Q9UNY4 1162 aaKnown RBP9.56□□□□□ -0.88
CPSF7-206ENST00000448745 ATF5Q9Y2D1 282 aaPredicted RBP9.56□□□□□ -0.88
CPSF7-206ENST00000448745 RRP15Q9Y3B9 282 aaKnown RBP9.56□□□□□ -0.88
CPSF7-206ENST00000448745 CTAGE9A4FU28 777 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 SEMA3EO15041 775 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 ZBTB43O43298 467 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 MDM2Q00987 491 aaPredicted RBP9.56□□□□□ -0.88
CPSF7-206ENST00000448745 FKBP4Q02790 459 aaKnown RBP eCLIP9.56□□□□□ -0.88
CPSF7-206ENST00000448745 PDE4CQ08493 712 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 HSP90B2PQ58FF3 399 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 BEND6Q5SZJ8 279 aaPredicted RBP9.56□□□□□ -0.88
CPSF7-206ENST00000448745 CTAGE1Q96RT6 745 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 MRPL44Q9H9J2 332 aaKnown RBP9.56□□□□□ -0.88
CPSF7-206ENST00000448745 VPS18Q9P253 973 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 MYO1AQ9UBC5 1043 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 CEP131Q9UPN4 1083 aa9.56□□□□□ -0.88
CPSF7-206ENST00000448745 C10orf71Q711Q0 1435 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms