RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 FOXP2O15409 715 aa22.49■■□□□ 1.19
HDAC4-203ENST00000445704 PABPC4Q13310 644 aaKnown RBP eCLIP22.49■■□□□ 1.19
HDAC4-203ENST00000445704 CLEC10AQ8IUN9 316 aa22.49■■□□□ 1.19
HDAC4-203ENST00000445704 IFNL3Q8IZI9 196 aa22.49■■□□□ 1.19
HDAC4-203ENST00000445704 TRIM47Q96LD4 638 aa22.49■■□□□ 1.19
HDAC4-203ENST00000445704 C12orf42Q96LP6 360 aa22.49■■□□□ 1.19
HDAC4-203ENST00000445704 A0A1W2PRG0 241 aa22.48■■□□□ 1.19
HDAC4-203ENST00000445704 MINDY4BA8MYZ0 360 aa22.48■■□□□ 1.19
HDAC4-203ENST00000445704 APPP05067 770 aa22.48■■□□□ 1.19
HDAC4-203ENST00000445704 OSBPP22059 807 aa22.48■■□□□ 1.19
HDAC4-203ENST00000445704 PDE4AP27815 886 aa22.48■■□□□ 1.19
HDAC4-203ENST00000445704 HOXA7P31268 230 aaPredicted RBP22.48■■□□□ 1.19
HDAC4-203ENST00000445704 PSMC4P43686 418 aa22.48■■□□□ 1.19
HDAC4-203ENST00000445704 TDO2P48775 406 aa22.48■■□□□ 1.19
HDAC4-203ENST00000445704 TMEM179Q6ZVK1 233 aa22.48■■□□□ 1.19
HDAC4-203ENST00000445704 STK11IPQ8N1F8 1099 aa22.48■■□□□ 1.19
HDAC4-203ENST00000445704 ANKRD13CQ8N6S4 541 aa22.48■■□□□ 1.19
HDAC4-203ENST00000445704 FAM227BQ96M60 508 aa22.48■■□□□ 1.19
HDAC4-203ENST00000445704 KIAA1683Q9H0B3 1180 aa22.48■■□□□ 1.19
HDAC4-203ENST00000445704 PTCH2Q9Y6C5 1203 aa22.48■■□□□ 1.19
HDAC4-203ENST00000445704 A0A0D9SFI3 127 aa22.47■■□□□ 1.19
HDAC4-203ENST00000445704 TRIM6-TRIM34B2RNG4 842 aa22.47■■□□□ 1.19
HDAC4-203ENST00000445704 ARHGEF6Q15052 776 aa22.47■■□□□ 1.19
HDAC4-203ENST00000445704 RILPL2Q969X0 211 aa22.47■■□□□ 1.19
HDAC4-203ENST00000445704 MGAMO43451 1857 aa22.46■■□□□ 1.19
HDAC4-203ENST00000445704 IRX3P78415 501 aaPredicted RBP22.46■■□□□ 1.19
HDAC4-203ENST00000445704 SIAH1Q8IUQ4 282 aa22.46■■□□□ 1.19
HDAC4-203ENST00000445704 CCDC17Q96LX7 622 aa22.46■■□□□ 1.19
HDAC4-203ENST00000445704 PEX10O60683 326 aa22.45■■□□□ 1.18
HDAC4-203ENST00000445704 FMNL1O95466 1100 aaPredicted RBP22.45■■□□□ 1.18
HDAC4-203ENST00000445704 USP14P54578 494 aa22.45■■□□□ 1.18
HDAC4-203ENST00000445704 SOX10P56693 466 aa22.45■■□□□ 1.18
HDAC4-203ENST00000445704 NMIQ13287 307 aaPredicted RBP22.45■■□□□ 1.18
HDAC4-203ENST00000445704 FAM110CQ1W6H9 321 aa22.45■■□□□ 1.18
HDAC4-203ENST00000445704 VPS53Q5VIR6 699 aa22.45■■□□□ 1.18
HDAC4-203ENST00000445704 P2RX7Q99572 595 aaKnown RBP22.45■■□□□ 1.18
HDAC4-203ENST00000445704 HELLSQ9NRZ9 838 aa22.45■■□□□ 1.18
HDAC4-203ENST00000445704 HTTP42858 3142 aa22.45■■□□□ 1.18
HDAC4-203ENST00000445704 GREB1LQ9C091 1923 aaPredicted RBP22.45■■□□□ 1.18
HDAC4-203ENST00000445704 GNRH1P01148 92 aa22.44■■□□□ 1.18
HDAC4-203ENST00000445704 VCAM1P19320 739 aa22.44■■□□□ 1.18
HDAC4-203ENST00000445704 RASA1P20936 1047 aa22.44■■□□□ 1.18
HDAC4-203ENST00000445704 GCLCP48506 637 aaPredicted RBP22.44■■□□□ 1.18
HDAC4-203ENST00000445704 ICA1Q05084 483 aa22.44■■□□□ 1.18
HDAC4-203ENST00000445704 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.44■■□□□ 1.18
HDAC4-203ENST00000445704 NACAP1Q9BZK3 213 aa22.44■■□□□ 1.18
HDAC4-203ENST00000445704 NAPBQ9H115 298 aa22.44■■□□□ 1.18
HDAC4-203ENST00000445704 FCGRTP55899 365 aa22.43■■□□□ 1.18
HDAC4-203ENST00000445704 HERVK_113P62684 666 aa22.43■■□□□ 1.18
HDAC4-203ENST00000445704 KIAA1755Q5JYT7 1200 aa22.43■■□□□ 1.18
HDAC4-203ENST00000445704 POTEEQ6S8J3 1075 aa22.43■■□□□ 1.18
HDAC4-203ENST00000445704 TICAM2Q86XR7 235 aa22.43■■□□□ 1.18
HDAC4-203ENST00000445704 SRRDQ9UH36 339 aa22.43■■□□□ 1.18
HDAC4-203ENST00000445704 SDSP20132 328 aa22.42■■□□□ 1.18
HDAC4-203ENST00000445704 MCMDC2Q4G0Z9 681 aa22.42■■□□□ 1.18
HDAC4-203ENST00000445704 ZNF589Q86UQ0 364 aaPredicted RBP22.42■■□□□ 1.18
HDAC4-203ENST00000445704 TXNRD2Q9NNW7 524 aa22.42■■□□□ 1.18
HDAC4-203ENST00000445704 MORF4L1Q9UBU8 362 aa22.42■■□□□ 1.18
HDAC4-203ENST00000445704 MYPNQ86TC9 1320 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 USP17L15C9J2P7 530 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 USP17L13C9JLJ4 530 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 USP17L11C9JVI0 530 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 USP17L18D6R9N7 530 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 USP17L22D6RA61 530 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 USP17L17D6RBQ6 530 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 USP17L19D6RCP7 530 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 USP17L20D6RJB6 530 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 PRDM1O75626 825 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 PRMT2P55345 433 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 PRKCZQ05513 592 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 PPARAQ07869 468 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 USP17L24Q0WX57 530 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 CATSPERGQ6ZRH7 1159 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 ARMC5Q96C12 935 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 RPAP3Q9H6T3 665 aaPredicted RBP22.41■■□□□ 1.18
HDAC4-203ENST00000445704 MKNK2Q9HBH9 465 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 ARHGEF10LQ9HCE6 1279 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 GABRQQ9UN88 632 aa22.41■■□□□ 1.18
HDAC4-203ENST00000445704 EEF2P13639 858 aaKnown RBP22.4■■□□□ 1.18
HDAC4-203ENST00000445704 RBPJLQ9UBG7 517 aa22.4■■□□□ 1.18
HDAC4-203ENST00000445704 TMX2Q9Y320 296 aa22.4■■□□□ 1.18
HDAC4-203ENST00000445704 TNPO2O14787 897 aaKnown RBP22.39■■□□□ 1.17
HDAC4-203ENST00000445704 GSPT1P15170 499 aaKnown RBP22.39■■□□□ 1.17
HDAC4-203ENST00000445704 HOXD10P28358 340 aa22.39■■□□□ 1.17
HDAC4-203ENST00000445704 SLC9C1Q4G0N8 1177 aa22.39■■□□□ 1.17
HDAC4-203ENST00000445704 KANSL2Q9H9L4 492 aa22.39■■□□□ 1.17
HDAC4-203ENST00000445704 CCDC171Q6TFL3 1326 aa22.38■■□□□ 1.17
HDAC4-203ENST00000445704 RGS19P49795 217 aa22.38■■□□□ 1.17
HDAC4-203ENST00000445704 ATP2B2Q01814 1243 aa22.38■■□□□ 1.17
HDAC4-203ENST00000445704 SH3TC2Q8TF17 1288 aa22.38■■□□□ 1.17
HDAC4-203ENST00000445704 ZNF333Q96JL9 665 aa22.38■■□□□ 1.17
HDAC4-203ENST00000445704 VCPKMTQ9H867 229 aa22.38■■□□□ 1.17
HDAC4-203ENST00000445704 TACC3Q9Y6A5 838 aa22.38■■□□□ 1.17
HDAC4-203ENST00000445704 IGKV6D-41A0A0C4DH26 115 aa22.37■■□□□ 1.17
HDAC4-203ENST00000445704 CNMDO75829 334 aa22.37■■□□□ 1.17
HDAC4-203ENST00000445704 HSPD1P10809 573 aaKnown RBP22.37■■□□□ 1.17
HDAC4-203ENST00000445704 CTDSPL2Q05D32 466 aa22.37■■□□□ 1.17
HDAC4-203ENST00000445704 ALX1Q15699 326 aa22.37■■□□□ 1.17
HDAC4-203ENST00000445704 Q3C1V9 767 aa22.37■■□□□ 1.17
HDAC4-203ENST00000445704 TTC22Q5TAA0 569 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms