RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 KCNQ1P51787 676 aa12.65□□□□□ -0.38
HOXD3-203ENST00000432796 RARSP54136 660 aaKnown RBP12.65□□□□□ -0.38
HOXD3-203ENST00000432796 TFF2Q03403 129 aa12.65□□□□□ -0.38
HOXD3-203ENST00000432796 CCDC129Q6ZRS4 1044 aa12.65□□□□□ -0.38
HOXD3-203ENST00000432796 FRAT1Q92837 279 aaPredicted RBP12.65□□□□□ -0.38
HOXD3-203ENST00000432796 WDR18Q9BV38 432 aa12.65□□□□□ -0.38
HOXD3-203ENST00000432796 SIL1Q9H173 461 aa12.65□□□□□ -0.38
HOXD3-203ENST00000432796 RLFQ13129 1914 aa12.64□□□□□ -0.39
HOXD3-203ENST00000432796 MYH13Q9UKX3 1938 aa12.64□□□□□ -0.39
HOXD3-203ENST00000432796 CACNA1AO00555 2505 aa12.64□□□□□ -0.39
HOXD3-203ENST00000432796 IL15P40933 162 aaPredicted RBP12.64□□□□□ -0.39
HOXD3-203ENST00000432796 ATP2B3Q16720 1220 aa12.64□□□□□ -0.39
HOXD3-203ENST00000432796 FTSJ3Q8IY81 847 aaKnown RBP12.64□□□□□ -0.39
HOXD3-203ENST00000432796 ZGPATQ8N5A5 531 aaKnown RBP12.64□□□□□ -0.39
HOXD3-203ENST00000432796 FERMT2Q96AC1 680 aa12.64□□□□□ -0.39
HOXD3-203ENST00000432796 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.64□□□□□ -0.39
HOXD3-203ENST00000432796 CHD7Q9P2D1 2997 aa12.63□□□□□ -0.39
HOXD3-203ENST00000432796 C19orf81C9J6K1 198 aa12.63□□□□□ -0.39
HOXD3-203ENST00000432796 SEPT4O43236 478 aa12.63□□□□□ -0.39
HOXD3-203ENST00000432796 NPM3O75607 178 aaKnown RBP12.63□□□□□ -0.39
HOXD3-203ENST00000432796 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
HOXD3-203ENST00000432796 PTPREP23469 700 aa12.63□□□□□ -0.39
HOXD3-203ENST00000432796 CCNA1P78396 465 aa12.63□□□□□ -0.39
HOXD3-203ENST00000432796 GRB14Q14449 540 aa12.63□□□□□ -0.39
HOXD3-203ENST00000432796 RRP1BQ14684 758 aaKnown RBP12.63□□□□□ -0.39
HOXD3-203ENST00000432796 LRRC41Q15345 812 aa12.63□□□□□ -0.39
HOXD3-203ENST00000432796 ANO1Q5XXA6 986 aa12.63□□□□□ -0.39
HOXD3-203ENST00000432796 KLHDC4Q8TBB5 520 aa12.63□□□□□ -0.39
HOXD3-203ENST00000432796 TMEM39AQ9NV64 488 aa12.63□□□□□ -0.39
HOXD3-203ENST00000432796 AKAP2Q9Y2D5 859 aa12.63□□□□□ -0.39
HOXD3-203ENST00000432796 NDUFB9Q9Y6M9 179 aa12.63□□□□□ -0.39
HOXD3-203ENST00000432796 FAM86C2PA6NEL3 165 aa12.62□□□□□ -0.39
HOXD3-203ENST00000432796 GRXCR1A8MXD5 290 aa12.62□□□□□ -0.39
HOXD3-203ENST00000432796 SEMA3EO15041 775 aa12.62□□□□□ -0.39
HOXD3-203ENST00000432796 ERC2O15083 957 aa12.62□□□□□ -0.39
HOXD3-203ENST00000432796 RAB30Q15771 203 aa12.62□□□□□ -0.39
HOXD3-203ENST00000432796 RASIP1Q5U651 963 aa12.62□□□□□ -0.39
HOXD3-203ENST00000432796 WDR78Q5VTH9 848 aa12.62□□□□□ -0.39
HOXD3-203ENST00000432796 ATF7IPQ6VMQ6 1270 aa12.62□□□□□ -0.39
HOXD3-203ENST00000432796 SLF2Q8IX21 1173 aa12.62□□□□□ -0.39
HOXD3-203ENST00000432796 NPLOC4Q8TAT6 608 aa12.62□□□□□ -0.39
HOXD3-203ENST00000432796 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
HOXD3-203ENST00000432796 DENND2AQ9ULE3 1009 aa12.62□□□□□ -0.39
HOXD3-203ENST00000432796 PHF24Q9UPV7 400 aa12.62□□□□□ -0.39
HOXD3-203ENST00000432796 RABGAP1Q9Y3P9 1069 aa12.62□□□□□ -0.39
HOXD3-203ENST00000432796 IVNS1ABPQ9Y6Y0 642 aa12.62□□□□□ -0.39
HOXD3-203ENST00000432796 REV3LO60673 3130 aa12.61□□□□□ -0.39
HOXD3-203ENST00000432796 SRGAP3O43295 1099 aa12.61□□□□□ -0.39
HOXD3-203ENST00000432796 PQBP1O60828 265 aaKnown RBP12.61□□□□□ -0.39
HOXD3-203ENST00000432796 CNMDO75829 334 aa12.61□□□□□ -0.39
HOXD3-203ENST00000432796 GNAI2P04899 355 aa12.61□□□□□ -0.39
HOXD3-203ENST00000432796 ASNSP08243 561 aa12.61□□□□□ -0.39
HOXD3-203ENST00000432796 BTDP43251 543 aa12.61□□□□□ -0.39
HOXD3-203ENST00000432796 GORABQ5T7V8 394 aa12.61□□□□□ -0.39
HOXD3-203ENST00000432796 ZKSCAN2Q63HK3 967 aa12.61□□□□□ -0.39
HOXD3-203ENST00000432796 CCDC174Q6PII3 467 aa12.61□□□□□ -0.39
HOXD3-203ENST00000432796 SLC44A5Q8NCS7 719 aa12.61□□□□□ -0.39
HOXD3-203ENST00000432796 HERVK_113Q902F9 699 aa12.61□□□□□ -0.39
HOXD3-203ENST00000432796 HERC5Q9UII4 1024 aaKnown RBP12.61□□□□□ -0.39
HOXD3-203ENST00000432796 MSRAQ9UJ68 235 aa12.61□□□□□ -0.39
HOXD3-203ENST00000432796 USP17L10C9JJH3 530 aa12.6□□□□□ -0.39
HOXD3-203ENST00000432796 SMIM22K7EJ46 135 aa12.6□□□□□ -0.39
HOXD3-203ENST00000432796 RHBDL3P58872 404 aa12.6□□□□□ -0.39
HOXD3-203ENST00000432796 OS9Q13438 667 aaPredicted RBP12.6□□□□□ -0.39
HOXD3-203ENST00000432796 TMEM240Q5SV17 173 aa12.6□□□□□ -0.39
HOXD3-203ENST00000432796 OLFML2BQ68BL8 750 aa12.6□□□□□ -0.39
HOXD3-203ENST00000432796 DZIP1Q86YF9 867 aaKnown RBP12.6□□□□□ -0.39
HOXD3-203ENST00000432796 MICALL1Q8N3F8 863 aa12.6□□□□□ -0.39
HOXD3-203ENST00000432796 KHSRPQ92945 711 aaKnown RBP eCLIP12.6□□□□□ -0.39
HOXD3-203ENST00000432796 MEIS3Q99687 375 aa12.6□□□□□ -0.39
HOXD3-203ENST00000432796 PRR33A8MZF0 331 aa12.59□□□□□ -0.39
HOXD3-203ENST00000432796 TIMP1P01033 207 aa12.59□□□□□ -0.39
HOXD3-203ENST00000432796 RFX5P48382 616 aaPredicted RBP12.59□□□□□ -0.39
HOXD3-203ENST00000432796 FAAP100Q0VG06 881 aa12.59□□□□□ -0.39
HOXD3-203ENST00000432796 G3BP1Q13283 466 aaKnown RBP eCLIP12.59□□□□□ -0.39
HOXD3-203ENST00000432796 PPIGQ13427 754 aaKnown RBP eCLIP12.59□□□□□ -0.39
HOXD3-203ENST00000432796 MVPQ14764 893 aaKnown RBP12.59□□□□□ -0.39
HOXD3-203ENST00000432796 SKIV2LQ15477 1246 aaKnown RBP12.59□□□□□ -0.39
HOXD3-203ENST00000432796 FAM47AQ5JRC9 791 aa12.59□□□□□ -0.39
HOXD3-203ENST00000432796 SPTY2D1Q68D10 685 aaPredicted RBP12.59□□□□□ -0.39
HOXD3-203ENST00000432796 ANKRD33Q7Z3H0 272 aa12.59□□□□□ -0.39
HOXD3-203ENST00000432796 TOX2Q96NM4 488 aa12.59□□□□□ -0.39
HOXD3-203ENST00000432796 SLC28A3Q9HAS3 691 aa12.59□□□□□ -0.39
HOXD3-203ENST00000432796 COPRSQ9NQ92 184 aa12.59□□□□□ -0.39
HOXD3-203ENST00000432796 MROH7-TTC4A0A0A0MT08 1334 aa12.59□□□□□ -0.39
HOXD3-203ENST00000432796 DCDC2CA8MYV0 355 aa12.58□□□□□ -0.4
HOXD3-203ENST00000432796 PI4K2BG5E9Z4 385 aa12.58□□□□□ -0.4
HOXD3-203ENST00000432796 ZBTB22O15209 634 aa12.58□□□□□ -0.4
HOXD3-203ENST00000432796 TLL1O43897 1013 aa12.58□□□□□ -0.4
HOXD3-203ENST00000432796 MS4A1P11836 297 aa12.58□□□□□ -0.4
HOXD3-203ENST00000432796 TRIM27P14373 513 aa12.58□□□□□ -0.4
HOXD3-203ENST00000432796 NHLH1Q02575 133 aa12.58□□□□□ -0.4
HOXD3-203ENST00000432796 MFSD5Q6N075 450 aa12.58□□□□□ -0.4
HOXD3-203ENST00000432796 PSRC1Q6PGN9 363 aaPredicted RBP12.58□□□□□ -0.4
HOXD3-203ENST00000432796 C16orf59Q7L2K0 433 aa12.58□□□□□ -0.4
HOXD3-203ENST00000432796 CLUAP1Q96AJ1 413 aa12.58□□□□□ -0.4
HOXD3-203ENST00000432796 NKX2-4Q9H2Z4 354 aa12.58□□□□□ -0.4
HOXD3-203ENST00000432796 EMILIN3Q9NT22 766 aa12.58□□□□□ -0.4
HOXD3-203ENST00000432796 COG5Q9UP83 839 aa12.58□□□□□ -0.4
HOXD3-203ENST00000432796 GPR75-ASB3A0A0A6YYF3 556 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms