RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 TAOK2Q9UL54 1235 aa30.8■■■□□ 2.52
SH3GL3-202ENST00000427482 YEATS4O95619 227 aa30.79■■■□□ 2.52
SH3GL3-202ENST00000427482 KIF5BP33176 963 aa30.79■■■□□ 2.52
SH3GL3-202ENST00000427482 NASPP49321 788 aaPredicted RBP30.79■■■□□ 2.52
SH3GL3-202ENST00000427482 GNL2Q13823 731 aaKnown RBP30.79■■■□□ 2.52
SH3GL3-202ENST00000427482 PKN1Q16512 942 aa30.79■■■□□ 2.52
SH3GL3-202ENST00000427482 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.79■■■□□ 2.52
SH3GL3-202ENST00000427482 SERPINA10Q9UK55 444 aa30.79■■■□□ 2.52
SH3GL3-202ENST00000427482 CLIC4Q9Y696 253 aa30.79■■■□□ 2.52
SH3GL3-202ENST00000427482 SRBD1Q8N5C6 995 aaKnown RBP30.78■■■□□ 2.52
SH3GL3-202ENST00000427482 LINC00301Q8NCQ3 95 aa30.78■■■□□ 2.52
SH3GL3-202ENST00000427482 BICD2Q8TD16 824 aa30.78■■■□□ 2.52
SH3GL3-202ENST00000427482 PLIN4Q96Q06 1357 aa30.78■■■□□ 2.52
SH3GL3-202ENST00000427482 SAFBQ15424 915 aaKnown RBP eCLIP30.77■■■□□ 2.52
SH3GL3-202ENST00000427482 KLHL34Q8N239 644 aa30.77■■■□□ 2.52
SH3GL3-202ENST00000427482 KCNJ14Q9UNX9 436 aa30.77■■■□□ 2.52
SH3GL3-202ENST00000427482 SIPA1L1O43166 1804 aa30.77■■■□□ 2.52
SH3GL3-202ENST00000427482 TGFB2P61812 414 aa30.77■■■□□ 2.52
SH3GL3-202ENST00000427482 TMEM47Q9BQJ4 181 aa30.77■■■□□ 2.52
SH3GL3-202ENST00000427482 MTFR1LQ9H019 292 aa30.77■■■□□ 2.52
SH3GL3-202ENST00000427482 PCDHAC2Q9Y5I4 1007 aa30.77■■■□□ 2.52
SH3GL3-202ENST00000427482 GRM4Q14833 912 aa30.76■■■□□ 2.51
SH3GL3-202ENST00000427482 V9GY48 417 aaPredicted RBP30.76■■■□□ 2.51
SH3GL3-202ENST00000427482 COL4A5P29400 1685 aa30.76■■■□□ 2.51
SH3GL3-202ENST00000427482 NFIAQ12857 509 aa30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 ANO1Q5XXA6 986 aa30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 DIS3L2Q8IYB7 885 aaKnown RBP30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 PANK2Q9BZ23 570 aa30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 RBSNQ9H1K0 784 aa30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 STX8Q9UNK0 236 aa30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 MYO3BQ8WXR4 1341 aa30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 POLD1P28340 1107 aa30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 STK38Q15208 465 aa30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 SOGA3Q5TF21 947 aa30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 KCNG4Q8TDN1 519 aa30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 FOXP1Q9H334 677 aaPredicted RBP30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 TSPY26PQ9H489 355 aa30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 DDX19AQ9NUU7 478 aaKnown RBP30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 SWAP70Q9UH65 585 aa30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 ATF5Q9Y2D1 282 aaPredicted RBP30.75■■■□□ 2.51
SH3GL3-202ENST00000427482 BAZ2BQ9UIF8 2168 aaKnown RBP30.74■■■□□ 2.51
SH3GL3-202ENST00000427482 GREB1LQ9C091 1923 aaPredicted RBP30.74■■■□□ 2.51
SH3GL3-202ENST00000427482 XBP1P17861 261 aa30.74■■■□□ 2.51
SH3GL3-202ENST00000427482 NOVP48745 357 aa30.74■■■□□ 2.51
SH3GL3-202ENST00000427482 RBM5P52756 815 aaKnown RBP eCLIP30.74■■■□□ 2.51
SH3GL3-202ENST00000427482 NOSTRINQ8IVI9 506 aa30.74■■■□□ 2.51
SH3GL3-202ENST00000427482 SHISA4Q96DD7 197 aa30.74■■■□□ 2.51
SH3GL3-202ENST00000427482 VPS33BQ9H267 617 aa30.74■■■□□ 2.51
SH3GL3-202ENST00000427482 DACT1Q9NYF0 836 aa30.74■■■□□ 2.51
SH3GL3-202ENST00000427482 SERPINB13Q9UIV8 391 aa30.74■■■□□ 2.51
SH3GL3-202ENST00000427482 BTBD18B2RXH4 712 aa30.73■■■□□ 2.51
SH3GL3-202ENST00000427482 ME1P48163 572 aa30.73■■■□□ 2.51
SH3GL3-202ENST00000427482 IDI2Q9BXS1 227 aa30.73■■■□□ 2.51
SH3GL3-202ENST00000427482 PIM2Q9P1W9 311 aa30.73■■■□□ 2.51
SH3GL3-202ENST00000427482 FER1L6Q2WGJ9 1857 aa30.73■■■□□ 2.51
SH3GL3-202ENST00000427482 HLA-DOAP06340 250 aa30.73■■■□□ 2.51
SH3GL3-202ENST00000427482 LARGE2Q8N3Y3 721 aa30.73■■■□□ 2.51
SH3GL3-202ENST00000427482 NUP62CLQ9H1M0 184 aa30.73■■■□□ 2.51
SH3GL3-202ENST00000427482 ZNF277Q9NRM2 450 aaPredicted RBP30.73■■■□□ 2.51
SH3GL3-202ENST00000427482 PCDHA7Q9UN72 937 aa30.73■■■□□ 2.51
SH3GL3-202ENST00000427482 hCG_1642624A0A1W2PR95 340 aa30.72■■■□□ 2.51
SH3GL3-202ENST00000427482 SPTLC2O15270 562 aa30.72■■■□□ 2.51
SH3GL3-202ENST00000427482 CEP95Q96GE4 821 aa30.72■■■□□ 2.51
SH3GL3-202ENST00000427482 EHD4Q9H223 541 aa30.72■■■□□ 2.51
SH3GL3-202ENST00000427482 VPS54Q9P1Q0 977 aa30.72■■■□□ 2.51
SH3GL3-202ENST00000427482 MAD2L2Q9UI95 211 aa30.72■■■□□ 2.51
SH3GL3-202ENST00000427482 NR1I2O75469 434 aa30.71■■■□□ 2.51
SH3GL3-202ENST00000427482 NPM3O75607 178 aaKnown RBP30.71■■■□□ 2.51
SH3GL3-202ENST00000427482 GNAQP50148 359 aa30.71■■■□□ 2.51
SH3GL3-202ENST00000427482 CCAR1Q8IX12 1150 aaKnown RBP30.71■■■□□ 2.51
SH3GL3-202ENST00000427482 PHF20Q9BVI0 1012 aa30.71■■■□□ 2.51
SH3GL3-202ENST00000427482 TOP1P11387 765 aaKnown RBP30.7■■■□□ 2.5
SH3GL3-202ENST00000427482 SF3A1Q15459 793 aaKnown RBP30.7■■■□□ 2.5
SH3GL3-202ENST00000427482 ADALQ6DHV7 355 aa30.7■■■□□ 2.5
SH3GL3-202ENST00000427482 STAG2Q8N3U4 1231 aa30.7■■■□□ 2.5
SH3GL3-202ENST00000427482 FAM198AQ9UFP1 575 aa30.7■■■□□ 2.5
SH3GL3-202ENST00000427482 A0A1W2PQ27 194 aa30.69■■■□□ 2.5
SH3GL3-202ENST00000427482 A0A1W2PQ64 194 aa30.69■■■□□ 2.5
SH3GL3-202ENST00000427482 A0A1W2PQD8 194 aa30.69■■■□□ 2.5
SH3GL3-202ENST00000427482 SHMT1P34896 483 aa30.69■■■□□ 2.5
SH3GL3-202ENST00000427482 CACNB3P54284 484 aa30.69■■■□□ 2.5
SH3GL3-202ENST00000427482 SLC39A14Q15043 492 aa30.69■■■□□ 2.5
SH3GL3-202ENST00000427482 RSBN1LQ6PCB5 846 aaPredicted RBP30.69■■■□□ 2.5
SH3GL3-202ENST00000427482 ZFPM1Q8IX07 1006 aa30.69■■■□□ 2.5
SH3GL3-202ENST00000427482 DHX36Q9H2U1 1008 aaKnown RBP30.69■■■□□ 2.5
SH3GL3-202ENST00000427482 CLSTN2Q9H4D0 955 aa30.69■■■□□ 2.5
SH3GL3-202ENST00000427482 SCG2P13521 617 aa30.68■■■□□ 2.5
SH3GL3-202ENST00000427482 AKR1B1P15121 316 aa30.68■■■□□ 2.5
SH3GL3-202ENST00000427482 CFAP100Q494V2 611 aa30.68■■■□□ 2.5
SH3GL3-202ENST00000427482 GOLPH3LQ9H4A5 285 aa30.68■■■□□ 2.5
SH3GL3-202ENST00000427482 IGKV6D-41A0A0C4DH26 115 aa30.68■■■□□ 2.5
SH3GL3-202ENST00000427482 PALM3A6NDB9 673 aaPredicted RBP30.68■■■□□ 2.5
SH3GL3-202ENST00000427482 VIL1P09327 827 aaKnown RBP30.68■■■□□ 2.5
SH3GL3-202ENST00000427482 PFKFB3Q16875 520 aaPredicted RBP30.68■■■□□ 2.5
SH3GL3-202ENST00000427482 OXER1Q8TDS5 423 aa30.68■■■□□ 2.5
SH3GL3-202ENST00000427482 FUCA2Q9BTY2 467 aa30.68■■■□□ 2.5
SH3GL3-202ENST00000427482 NR5A1Q13285 461 aa30.67■■■□□ 2.5
SH3GL3-202ENST00000427482 PTPAQ15257 358 aa30.67■■■□□ 2.5
SH3GL3-202ENST00000427482 CCDC73Q6ZRK6 1079 aa30.67■■■□□ 2.5
SH3GL3-202ENST00000427482 MYH4Q9Y623 1939 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms