RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 TTC14Q96N46 770 aa28.39■■■□□ 2.14
APOE-202ENST00000425718 NEK1Q96PY6 1258 aa28.39■■■□□ 2.14
APOE-202ENST00000425718 UBAC1Q9BSL1 405 aa28.39■■■□□ 2.14
APOE-202ENST00000425718 NYAP2Q9P242 653 aa28.39■■■□□ 2.14
APOE-202ENST00000425718 ERICH2A1L162 156 aa28.38■■■□□ 2.13
APOE-202ENST00000425718 C19orf81C9J6K1 198 aa28.38■■■□□ 2.13
APOE-202ENST00000425718 TTLL1O95922 423 aa28.38■■■□□ 2.13
APOE-202ENST00000425718 USP14P54578 494 aa28.38■■■□□ 2.13
APOE-202ENST00000425718 NOGQ13253 232 aa28.38■■■□□ 2.13
APOE-202ENST00000425718 SPRYD7Q5W111 196 aa28.38■■■□□ 2.13
APOE-202ENST00000425718 INCENPQ9NQS7 918 aa28.38■■■□□ 2.13
APOE-202ENST00000425718 SNX14Q9Y5W7 946 aa28.38■■■□□ 2.13
APOE-202ENST00000425718 WDR19Q8NEZ3 1342 aa28.38■■■□□ 2.13
APOE-202ENST00000425718 IGKV6D-41A0A0C4DH26 115 aa28.37■■■□□ 2.13
APOE-202ENST00000425718 SEC24BO95487 1268 aa28.37■■■□□ 2.13
APOE-202ENST00000425718 GTF2A2P52657 109 aa28.37■■■□□ 2.13
APOE-202ENST00000425718 SNAPC2Q13487 334 aa28.37■■■□□ 2.13
APOE-202ENST00000425718 MTMR4Q9NYA4 1195 aa28.37■■■□□ 2.13
APOE-202ENST00000425718 ZSWIM5Q9P217 1185 aa28.37■■■□□ 2.13
APOE-202ENST00000425718 KCNH4Q9UQ05 1017 aa28.37■■■□□ 2.13
APOE-202ENST00000425718 AFG3L2Q9Y4W6 797 aa28.37■■■□□ 2.13
APOE-202ENST00000425718 TACC3Q9Y6A5 838 aa28.37■■■□□ 2.13
APOE-202ENST00000425718 USP17L10C9JJH3 530 aa28.36■■■□□ 2.13
APOE-202ENST00000425718 GUCY1A2P33402 732 aa28.36■■■□□ 2.13
APOE-202ENST00000425718 STOX1Q6ZVD7 989 aa28.36■■■□□ 2.13
APOE-202ENST00000425718 RASEFQ8IZ41 740 aa28.36■■■□□ 2.13
APOE-202ENST00000425718 IL27Q8NEV9 243 aa28.36■■■□□ 2.13
APOE-202ENST00000425718 FEZ1Q99689 392 aa28.36■■■□□ 2.13
APOE-202ENST00000425718 TM6SF1Q9BZW5 370 aa28.36■■■□□ 2.13
APOE-202ENST00000425718 MANSC4A6NHS7 340 aaPredicted RBP28.35■■■□□ 2.13
APOE-202ENST00000425718 INHBEP58166 350 aa28.35■■■□□ 2.13
APOE-202ENST00000425718 DGKHQ86XP1 1220 aa28.35■■■□□ 2.13
APOE-202ENST00000425718 MB21D2Q8IYB1 491 aaPredicted RBP28.35■■■□□ 2.13
APOE-202ENST00000425718 CEP95Q96GE4 821 aa28.35■■■□□ 2.13
APOE-202ENST00000425718 TMEM87BQ96K49 555 aa28.35■■■□□ 2.13
APOE-202ENST00000425718 CAPNS2Q96L46 248 aa28.35■■■□□ 2.13
APOE-202ENST00000425718 C22orf23Q9BZE7 217 aa28.35■■■□□ 2.13
APOE-202ENST00000425718 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.35■■■□□ 2.13
APOE-202ENST00000425718 BLOC1S2Q6QNY1 142 aa28.34■■■□□ 2.13
APOE-202ENST00000425718 IL17RAQ96F46 866 aa28.34■■■□□ 2.13
APOE-202ENST00000425718 JAKMIP1Q96N16 626 aaKnown RBP28.34■■■□□ 2.13
APOE-202ENST00000425718 ZSCAN10Q96SZ4 725 aaPredicted RBP28.34■■■□□ 2.13
APOE-202ENST00000425718 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.34■■■□□ 2.13
APOE-202ENST00000425718 KIAA1683Q9H0B3 1180 aa28.34■■■□□ 2.13
APOE-202ENST00000425718 IRF6O14896 467 aa28.33■■■□□ 2.13
APOE-202ENST00000425718 CETPP11597 493 aa28.33■■■□□ 2.13
APOE-202ENST00000425718 BACE1P56817 501 aa28.33■■■□□ 2.13
APOE-202ENST00000425718 JAG1P78504 1218 aa28.33■■■□□ 2.13
APOE-202ENST00000425718 SREBF2Q12772 1141 aa28.33■■■□□ 2.13
APOE-202ENST00000425718 SPP2Q13103 211 aa28.33■■■□□ 2.13
APOE-202ENST00000425718 DHX32Q7L7V1 743 aaKnown RBP28.33■■■□□ 2.13
APOE-202ENST00000425718 FASTKD5Q7L8L6 764 aaKnown RBP28.33■■■□□ 2.13
APOE-202ENST00000425718 TMTC2Q8N394 836 aa28.33■■■□□ 2.13
APOE-202ENST00000425718 MKL1Q969V6 931 aa28.33■■■□□ 2.13
APOE-202ENST00000425718 GOPCQ9HD26 462 aa28.33■■■□□ 2.13
APOE-202ENST00000425718 TMOD4Q9NZQ9 345 aa28.33■■■□□ 2.13
APOE-202ENST00000425718 STX8Q9UNK0 236 aa28.33■■■□□ 2.13
APOE-202ENST00000425718 EEF2P13639 858 aaKnown RBP28.32■■■□□ 2.12
APOE-202ENST00000425718 NOVP48745 357 aa28.32■■■□□ 2.12
APOE-202ENST00000425718 ATP2B2Q01814 1243 aa28.32■■■□□ 2.12
APOE-202ENST00000425718 USP17L2Q6R6M4 530 aa28.32■■■□□ 2.12
APOE-202ENST00000425718 TMX2Q9Y320 296 aa28.32■■■□□ 2.12
APOE-202ENST00000425718 TAF6LQ9Y6J9 622 aa28.32■■■□□ 2.12
APOE-202ENST00000425718 LOC285556D6RIA3 1793 aa28.32■■■□□ 2.12
APOE-202ENST00000425718 TRIM75PA6NK02 468 aa28.31■■■□□ 2.12
APOE-202ENST00000425718 FAM155AB1AL88 458 aaPredicted RBP28.31■■■□□ 2.12
APOE-202ENST00000425718 TOP1P11387 765 aaKnown RBP28.31■■■□□ 2.12
APOE-202ENST00000425718 MAP2K2P36507 400 aa28.31■■■□□ 2.12
APOE-202ENST00000425718 RBM25P49756 843 aaKnown RBP28.31■■■□□ 2.12
APOE-202ENST00000425718 SH3D19Q5HYK7 790 aa28.31■■■□□ 2.12
APOE-202ENST00000425718 CYP4F22Q6NT55 531 aa28.31■■■□□ 2.12
APOE-202ENST00000425718 PROCA1Q8NCQ7 364 aaPredicted RBP28.31■■■□□ 2.12
APOE-202ENST00000425718 ANKS1AQ92625 1134 aa28.31■■■□□ 2.12
APOE-202ENST00000425718 LPAR1Q92633 364 aa28.31■■■□□ 2.12
APOE-202ENST00000425718 IL17RBQ9NRM6 502 aa28.31■■■□□ 2.12
APOE-202ENST00000425718 CLIP2Q9UDT6 1046 aa28.31■■■□□ 2.12
APOE-202ENST00000425718 TNKSO95271 1327 aa28.3■■■□□ 2.12
APOE-202ENST00000425718 WDR33Q9C0J8 1336 aaKnown RBP28.3■■■□□ 2.12
APOE-202ENST00000425718 A0A0G2JLL6 359 aaPredicted RBP28.3■■■□□ 2.12
APOE-202ENST00000425718 IFIT3O14879 490 aaKnown RBP28.3■■■□□ 2.12
APOE-202ENST00000425718 PRC1O43663 620 aa28.3■■■□□ 2.12
APOE-202ENST00000425718 SHROOM1Q2M3G4 852 aaPredicted RBP28.3■■■□□ 2.12
APOE-202ENST00000425718 PRRT2Q7Z6L0 340 aaPredicted RBP28.3■■■□□ 2.12
APOE-202ENST00000425718 CNKSR2Q8WXI2 1034 aa28.3■■■□□ 2.12
APOE-202ENST00000425718 CYP46A1Q9Y6A2 500 aa28.3■■■□□ 2.12
APOE-202ENST00000425718 CASTP20810 708 aaKnown RBP28.29■■■□□ 2.12
APOE-202ENST00000425718 GJA5P36382 358 aa28.29■■■□□ 2.12
APOE-202ENST00000425718 WTAPQ15007 396 aa28.29■■■□□ 2.12
APOE-202ENST00000425718 ADCK5Q3MIX3 580 aa28.29■■■□□ 2.12
APOE-202ENST00000425718 IFIT1BQ5T764 474 aaKnown RBP28.29■■■□□ 2.12
APOE-202ENST00000425718 OTUD7BQ6GQQ9 843 aa28.29■■■□□ 2.12
APOE-202ENST00000425718 CYB5R4Q7L1T6 521 aa28.29■■■□□ 2.12
APOE-202ENST00000425718 C12orf42Q96LP6 360 aa28.29■■■□□ 2.12
APOE-202ENST00000425718 PABPC4Q13310 644 aaKnown RBP eCLIP28.28■■■□□ 2.121e-6■■■■■ 43.8
APOE-202ENST00000425718 MTMR2Q13614 643 aa28.28■■■□□ 2.12
APOE-202ENST00000425718 VCPKMTQ9H867 229 aa28.28■■■□□ 2.12
APOE-202ENST00000425718 KAT14Q9H8E8 782 aa28.28■■■□□ 2.12
APOE-202ENST00000425718 ZSWIM6Q9HCJ5 1215 aa28.28■■■□□ 2.12
APOE-202ENST00000425718 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.28■■■□□ 2.12
APOE-202ENST00000425718 FGD1P98174 961 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms