RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 ARFGAP3Q9NP61 516 aa16.37■□□□□ 0.21
MSH5-206ENST00000423982 RIPOR2Q9Y4F9 1068 aa16.37■□□□□ 0.21
MSH5-206ENST00000423982 TEX33O43247 280 aa16.36■□□□□ 0.21
MSH5-206ENST00000423982 ATP2B1P20020 1258 aa16.36■□□□□ 0.21
MSH5-206ENST00000423982 TM4SF1P30408 202 aa16.36■□□□□ 0.21
MSH5-206ENST00000423982 FAM193AP78312 1265 aa16.36■□□□□ 0.21
MSH5-206ENST00000423982 DHX8Q14562 1220 aaKnown RBP16.36■□□□□ 0.21
MSH5-206ENST00000423982 USP49Q70CQ1 688 aa16.36■□□□□ 0.21
MSH5-206ENST00000423982 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.36■□□□□ 0.21
MSH5-206ENST00000423982 SUGCTQ9HAC7 445 aa16.36■□□□□ 0.21
MSH5-206ENST00000423982 SERTAD1Q9UHV2 236 aa16.36■□□□□ 0.21
MSH5-206ENST00000423982 LCMT1Q9UIC8 334 aa16.36■□□□□ 0.21
MSH5-206ENST00000423982 KCNJ14Q9UNX9 436 aa16.36■□□□□ 0.21
MSH5-206ENST00000423982 BTBD18B2RXH4 712 aa16.36■□□□□ 0.21
MSH5-206ENST00000423982 POLR2DO15514 142 aaKnown RBP16.36■□□□□ 0.21
MSH5-206ENST00000423982 SPECC1LQ69YQ0 1117 aa16.36■□□□□ 0.21
MSH5-206ENST00000423982 CREBRFQ8IUR6 639 aa16.36■□□□□ 0.21
MSH5-206ENST00000423982 CMTR1Q8N1G2 835 aaKnown RBP16.36■□□□□ 0.21
MSH5-206ENST00000423982 SH2B2O14492 632 aaPredicted RBP16.35■□□□□ 0.21
MSH5-206ENST00000423982 FCHSD1Q86WN1 690 aa16.35■□□□□ 0.21
MSH5-206ENST00000423982 JMYQ8N9B5 988 aa16.35■□□□□ 0.21
MSH5-206ENST00000423982 SLC26A6Q9BXS9 759 aa16.35■□□□□ 0.21
MSH5-206ENST00000423982 FAM217BQ9NTX9 383 aaPredicted RBP16.35■□□□□ 0.21
MSH5-206ENST00000423982 ECM29Q5VYK3 1845 aa16.35■□□□□ 0.21
MSH5-206ENST00000423982 STX10O60499 249 aa16.35■□□□□ 0.21
MSH5-206ENST00000423982 CASP1P29466 404 aa16.35■□□□□ 0.21
MSH5-206ENST00000423982 TOB1P50616 345 aaPredicted RBP16.35■□□□□ 0.21
MSH5-206ENST00000423982 NTRK3Q16288 839 aa16.35■□□□□ 0.21
MSH5-206ENST00000423982 LONRF2Q1L5Z9 754 aa16.35■□□□□ 0.21
MSH5-206ENST00000423982 WWC2Q6AWC2 1192 aa16.35■□□□□ 0.21
MSH5-206ENST00000423982 ANKRD18AQ8IVF6 992 aa16.35■□□□□ 0.21
MSH5-206ENST00000423982 TRIM34Q9BYJ4 488 aa16.35■□□□□ 0.21
MSH5-206ENST00000423982 FEZ2Q9UHY8 353 aaPredicted RBP16.35■□□□□ 0.21
MSH5-206ENST00000423982 RIC1Q4ADV7 1423 aa16.35■□□□□ 0.21
MSH5-206ENST00000423982 CUTAO60888 179 aa16.34■□□□□ 0.21
MSH5-206ENST00000423982 COBLO75128 1261 aa16.34■□□□□ 0.21
MSH5-206ENST00000423982 CIAO1O76071 339 aa16.34■□□□□ 0.21
MSH5-206ENST00000423982 ABL1P00519 1130 aa16.34■□□□□ 0.21
MSH5-206ENST00000423982 ZNF18P17022 549 aa16.34■□□□□ 0.21
MSH5-206ENST00000423982 MCAMP43121 646 aa16.34■□□□□ 0.21
MSH5-206ENST00000423982 TRDNQ13061 729 aa16.34■□□□□ 0.21
MSH5-206ENST00000423982 POSTNQ15063 836 aa16.34■□□□□ 0.21
MSH5-206ENST00000423982 NFXL1Q6ZNB6 911 aa16.34■□□□□ 0.21
MSH5-206ENST00000423982 NLGN1Q8N2Q7 840 aa16.34■□□□□ 0.21
MSH5-206ENST00000423982 FAM237AA0A1B0GTK4 181 aa16.34■□□□□ 0.21
MSH5-206ENST00000423982 IARSP41252 1262 aaKnown RBP16.34■□□□□ 0.21
MSH5-206ENST00000423982 RAD9BQ6WBX8 426 aa16.34■□□□□ 0.21
MSH5-206ENST00000423982 MYO5AQ9Y4I1 1855 aaKnown RBP16.34■□□□□ 0.21
MSH5-206ENST00000423982 TRIM66O15016 1216 aa16.33■□□□□ 0.21
MSH5-206ENST00000423982 TPM1P09493 284 aa16.33■□□□□ 0.21
MSH5-206ENST00000423982 LMAN1P49257 510 aa16.33■□□□□ 0.21
MSH5-206ENST00000423982 STX17P56962 302 aa16.33■□□□□ 0.21
MSH5-206ENST00000423982 MCM6Q14566 821 aa16.33■□□□□ 0.21
MSH5-206ENST00000423982 SLC9C2Q5TAH2 1124 aa16.33■□□□□ 0.21
MSH5-206ENST00000423982 CDC5LQ99459 802 aaKnown RBP16.33■□□□□ 0.21
MSH5-206ENST00000423982 ADAM21Q9UKJ8 722 aa16.33■□□□□ 0.21
MSH5-206ENST00000423982 ZBTB43O43298 467 aa16.33■□□□□ 0.2
MSH5-206ENST00000423982 N4BP1O75113 896 aaKnown RBP16.33■□□□□ 0.2
MSH5-206ENST00000423982 SF3B3Q15393 1217 aaKnown RBP16.33■□□□□ 0.2
MSH5-206ENST00000423982 ZSCAN26Q16670 478 aa16.33■□□□□ 0.2
MSH5-206ENST00000423982 KLHL10Q6JEL2 608 aa16.33■□□□□ 0.2
MSH5-206ENST00000423982 TXLNBQ8N3L3 684 aa16.33■□□□□ 0.2
MSH5-206ENST00000423982 KRI1Q8N9T8 703 aaKnown RBP16.33■□□□□ 0.2
MSH5-206ENST00000423982 RABGGTAQ92696 567 aa16.33■□□□□ 0.2
MSH5-206ENST00000423982 GOLGA1Q92805 767 aa16.33■□□□□ 0.2
MSH5-206ENST00000423982 PNKPQ96T60 521 aa16.33■□□□□ 0.2
MSH5-206ENST00000423982 WWC3Q9ULE0 1092 aa16.33■□□□□ 0.2
MSH5-206ENST00000423982 SPEF2Q9C093 1822 aa16.33■□□□□ 0.2
MSH5-206ENST00000423982 TNRC6CQ9HCJ0 1690 aaKnown RBP16.33■□□□□ 0.2
MSH5-206ENST00000423982 GOLGA8AA7E2F4 631 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 CHRNDQ07001 517 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 NR5A1Q13285 461 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 SLC10A5Q5PT55 438 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 RPGRQ92834 1020 aaKnown RBP16.32■□□□□ 0.2
MSH5-206ENST00000423982 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.32■□□□□ 0.2
MSH5-206ENST00000423982 RAI14Q9P0K7 980 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 IDH1O75874 414 aaKnown RBP16.32■□□□□ 0.2
MSH5-206ENST00000423982 ZFYP08048 801 aaPredicted RBP16.32■□□□□ 0.2
MSH5-206ENST00000423982 TXLNAP40222 546 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 TRIM29Q14134 588 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 FLAD1Q8NFF5 587 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 ZKSCAN3Q9BRR0 538 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 ANKZF1Q9H8Y5 726 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 PDE11AQ9HCR9 933 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 IQSEC3Q9UPP2 1182 aaPredicted RBP16.32■□□□□ 0.2
MSH5-206ENST00000423982 PCDHB6Q9Y5E3 794 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 TACC3Q9Y6A5 838 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 ATP8B1O43520 1251 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 PDE8BO95263 885 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 SMYD4Q8IYR2 804 aaPredicted RBP16.32■□□□□ 0.2
MSH5-206ENST00000423982 IGDCC4Q8TDY8 1250 aa16.32■□□□□ 0.2
MSH5-206ENST00000423982 ZBTB7AO95365 584 aa16.31■□□□□ 0.2
MSH5-206ENST00000423982 CHMP4BP1P59074 171 aa16.31■□□□□ 0.2
MSH5-206ENST00000423982 CTDSPL2Q05D32 466 aa16.31■□□□□ 0.2
MSH5-206ENST00000423982 RBL2Q08999 1139 aa16.31■□□□□ 0.2
MSH5-206ENST00000423982 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.31■□□□□ 0.2
MSH5-206ENST00000423982 LY9Q9HBG7 655 aa16.31■□□□□ 0.2
MSH5-206ENST00000423982 PIH1D3Q9NQM4 214 aaKnown RBP16.31■□□□□ 0.2
MSH5-206ENST00000423982 COL24A1Q17RW2 1714 aa16.31■□□□□ 0.2
MSH5-206ENST00000423982 RGL2O15211 777 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms