RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 COL6A1P12109 1028 aa20.55■□□□□ 0.88
UPF3AP3-201ENST00000420996 SYN1P17600 705 aa20.55■□□□□ 0.88
UPF3AP3-201ENST00000420996 USP14P54578 494 aa20.55■□□□□ 0.88
UPF3AP3-201ENST00000420996 CCNA1P78396 465 aa20.55■□□□□ 0.88
UPF3AP3-201ENST00000420996 CCL14Q16627 93 aa20.55■□□□□ 0.88
UPF3AP3-201ENST00000420996 LHX8Q68G74 356 aa20.55■□□□□ 0.88
UPF3AP3-201ENST00000420996 GPR153Q6NV75 609 aa20.55■□□□□ 0.88
UPF3AP3-201ENST00000420996 TTC6Q86TZ1 520 aa20.55■□□□□ 0.88
UPF3AP3-201ENST00000420996 FTSJ3Q8IY81 847 aaKnown RBP20.55■□□□□ 0.88
UPF3AP3-201ENST00000420996 FEZ1Q99689 392 aa20.55■□□□□ 0.88
UPF3AP3-201ENST00000420996 GLRX3O76003 335 aaKnown RBP20.54■□□□□ 0.88
UPF3AP3-201ENST00000420996 CCND3P30281 292 aaPredicted RBP20.54■□□□□ 0.88
UPF3AP3-201ENST00000420996 MAGEA10P43363 369 aaPredicted RBP20.54■□□□□ 0.88
UPF3AP3-201ENST00000420996 MAP3K12Q12852 859 aa20.54■□□□□ 0.88
UPF3AP3-201ENST00000420996 ZYXQ15942 572 aaKnown RBP20.54■□□□□ 0.88
UPF3AP3-201ENST00000420996 CERKLQ49MI3 558 aaPredicted RBP20.54■□□□□ 0.88
UPF3AP3-201ENST00000420996 ITPRIPQ8IWB1 547 aa20.54■□□□□ 0.88
UPF3AP3-201ENST00000420996 SLC17A8Q8NDX2 589 aa20.54■□□□□ 0.88
UPF3AP3-201ENST00000420996 KIAA1683Q9H0B3 1180 aa20.54■□□□□ 0.88
UPF3AP3-201ENST00000420996 CWC22Q9HCG8 908 aaKnown RBP20.54■□□□□ 0.88
UPF3AP3-201ENST00000420996 CNMDO75829 334 aa20.53■□□□□ 0.88
UPF3AP3-201ENST00000420996 MAP2K5Q13163 448 aa20.53■□□□□ 0.88
UPF3AP3-201ENST00000420996 RAB3GAP1Q15042 981 aa20.53■□□□□ 0.88
UPF3AP3-201ENST00000420996 ABCB5Q2M3G0 1257 aa20.53■□□□□ 0.88
UPF3AP3-201ENST00000420996 CATSPERGQ6ZRH7 1159 aa20.53■□□□□ 0.88
UPF3AP3-201ENST00000420996 EDC3Q96F86 508 aaKnown RBP20.53■□□□□ 0.88
UPF3AP3-201ENST00000420996 ANTXR1Q9H6X2 564 aa20.53■□□□□ 0.88
UPF3AP3-201ENST00000420996 NDUFB9Q9Y6M9 179 aa20.53■□□□□ 0.88
UPF3AP3-201ENST00000420996 RLBP1P12271 317 aa20.52■□□□□ 0.88
UPF3AP3-201ENST00000420996 LRIT3Q3SXY7 679 aa20.52■□□□□ 0.88
UPF3AP3-201ENST00000420996 LBX2Q6XYB7 198 aa20.52■□□□□ 0.88
UPF3AP3-201ENST00000420996 TDHQ8IZJ6 230 aa20.52■□□□□ 0.88
UPF3AP3-201ENST00000420996 CABP5Q9NP86 173 aa20.52■□□□□ 0.88
UPF3AP3-201ENST00000420996 FRMPD3Q5JV73 1810 aa20.52■□□□□ 0.88
UPF3AP3-201ENST00000420996 SLC15A5A6NIM6 579 aa20.51■□□□□ 0.87
UPF3AP3-201ENST00000420996 VCAM1P19320 739 aa20.51■□□□□ 0.87
UPF3AP3-201ENST00000420996 PTPREP23469 700 aa20.51■□□□□ 0.87
UPF3AP3-201ENST00000420996 ACER1Q8TDN7 264 aa20.51■□□□□ 0.87
UPF3AP3-201ENST00000420996 SHMT1P34896 483 aa20.5■□□□□ 0.87
UPF3AP3-201ENST00000420996 PLCD1P51178 756 aa20.5■□□□□ 0.87
UPF3AP3-201ENST00000420996 LRRC26Q2I0M4 334 aa20.5■□□□□ 0.87
UPF3AP3-201ENST00000420996 MFSD14CQ5VZR4 134 aa20.5■□□□□ 0.87
UPF3AP3-201ENST00000420996 CEP85Q6P2H3 762 aa20.5■□□□□ 0.87
UPF3AP3-201ENST00000420996 ERC1Q8IUD2 1116 aa20.5■□□□□ 0.87
UPF3AP3-201ENST00000420996 RIOK1Q9BRS2 568 aaKnown RBP20.5■□□□□ 0.87
UPF3AP3-201ENST00000420996 UBE2OQ9C0C9 1292 aaKnown RBP20.5■□□□□ 0.87
UPF3AP3-201ENST00000420996 LAMA3Q16787 3333 aa20.5■□□□□ 0.87
UPF3AP3-201ENST00000420996 WDR78Q5VTH9 848 aa20.49■□□□□ 0.87
UPF3AP3-201ENST00000420996 AACSQ86V21 672 aa20.49■□□□□ 0.87
UPF3AP3-201ENST00000420996 DEFB123Q8N688 67 aa20.49■□□□□ 0.87
UPF3AP3-201ENST00000420996 BTBD7Q9P203 1132 aa20.49■□□□□ 0.87
UPF3AP3-201ENST00000420996 IVNS1ABPQ9Y6Y0 642 aa20.49■□□□□ 0.87
UPF3AP3-201ENST00000420996 MAGEB6P1A0A0J9YX57 407 aa20.48■□□□□ 0.87
UPF3AP3-201ENST00000420996 SPDYE16A6NNV3 312 aaPredicted RBP20.48■□□□□ 0.87
UPF3AP3-201ENST00000420996 HOXC6P09630 235 aa20.48■□□□□ 0.87
UPF3AP3-201ENST00000420996 GUCY1A2P33402 732 aa20.48■□□□□ 0.87
UPF3AP3-201ENST00000420996 GABPAQ06546 454 aa20.48■□□□□ 0.87
UPF3AP3-201ENST00000420996 TTF1Q15361 905 aaPredicted RBP20.48■□□□□ 0.87
UPF3AP3-201ENST00000420996 RPAP3Q9H6T3 665 aaPredicted RBP20.48■□□□□ 0.87
UPF3AP3-201ENST00000420996 FLRT1Q9NZU1 646 aa20.48■□□□□ 0.87
UPF3AP3-201ENST00000420996 EXOC6BQ9Y2D4 811 aa20.48■□□□□ 0.87
UPF3AP3-201ENST00000420996 NAV1Q8NEY1 1877 aa20.47■□□□□ 0.87
UPF3AP3-201ENST00000420996 DLL1O00548 723 aa20.47■□□□□ 0.87
UPF3AP3-201ENST00000420996 POLR3DP05423 398 aaPredicted RBP20.47■□□□□ 0.87
UPF3AP3-201ENST00000420996 ATP2B2Q01814 1243 aa20.47■□□□□ 0.87
UPF3AP3-201ENST00000420996 GRB14Q14449 540 aa20.47■□□□□ 0.87
UPF3AP3-201ENST00000420996 MSCO60682 206 aa20.46■□□□□ 0.87
UPF3AP3-201ENST00000420996 SEPT2Q15019 361 aa20.46■□□□□ 0.87
UPF3AP3-201ENST00000420996 HSP90AB4PQ58FF6 505 aa20.46■□□□□ 0.87
UPF3AP3-201ENST00000420996 NPLOC4Q8TAT6 608 aa20.46■□□□□ 0.87
UPF3AP3-201ENST00000420996 CRNKL1Q9BZJ0 848 aaKnown RBP20.46■□□□□ 0.87
UPF3AP3-201ENST00000420996 DDX20Q9UHI6 824 aaKnown RBP20.46■□□□□ 0.87
UPF3AP3-201ENST00000420996 PDE6AP16499 860 aa20.45■□□□□ 0.86
UPF3AP3-201ENST00000420996 COG2Q14746 738 aa20.45■□□□□ 0.86
UPF3AP3-201ENST00000420996 SLC9C2Q5TAH2 1124 aa20.45■□□□□ 0.86
UPF3AP3-201ENST00000420996 LPAR1Q92633 364 aa20.45■□□□□ 0.86
UPF3AP3-201ENST00000420996 SENP6Q9GZR1 1112 aaPredicted RBP20.45■□□□□ 0.86
UPF3AP3-201ENST00000420996 HOXC10Q9NYD6 342 aa20.45■□□□□ 0.86
UPF3AP3-201ENST00000420996 COL6A3P12111 3177 aa20.45■□□□□ 0.86
UPF3AP3-201ENST00000420996 STRNO43815 780 aa20.44■□□□□ 0.86
UPF3AP3-201ENST00000420996 IGHA2P01877 340 aa20.44■□□□□ 0.86
UPF3AP3-201ENST00000420996 CNGA1P29973 690 aa20.44■□□□□ 0.86
UPF3AP3-201ENST00000420996 Q7L0L9 218 aa20.44■□□□□ 0.86
UPF3AP3-201ENST00000420996 RHPN1Q8TCX5 695 aa20.44■□□□□ 0.86
UPF3AP3-201ENST00000420996 IL1RAPL2Q9NP60 686 aa20.44■□□□□ 0.86
UPF3AP3-201ENST00000420996 MTMR10Q9NXD2 777 aa20.44■□□□□ 0.86
UPF3AP3-201ENST00000420996 MCM9Q9NXL9 1143 aa20.44■□□□□ 0.86
UPF3AP3-201ENST00000420996 RLFQ13129 1914 aa20.43■□□□□ 0.86
UPF3AP3-201ENST00000420996 A0A1W2PRG0 241 aa20.43■□□□□ 0.86
UPF3AP3-201ENST00000420996 CYP2C19P33261 490 aa20.43■□□□□ 0.86
UPF3AP3-201ENST00000420996 HNRNPUQ00839 825 aaKnown RBP eCLIP20.43■□□□□ 0.86
UPF3AP3-201ENST00000420996 MDM2Q00987 491 aaPredicted RBP20.43■□□□□ 0.86
UPF3AP3-201ENST00000420996 STXBP5LQ9Y2K9 1186 aa20.43■□□□□ 0.86
UPF3AP3-201ENST00000420996 ZNF236Q9UL36 1845 aa20.43■□□□□ 0.86
UPF3AP3-201ENST00000420996 MPHOSPH10O00566 681 aaKnown RBP20.42■□□□□ 0.86
UPF3AP3-201ENST00000420996 DPP9Q86TI2 863 aa20.42■□□□□ 0.86
UPF3AP3-201ENST00000420996 SHCBP1Q8NEM2 672 aa20.42■□□□□ 0.86
UPF3AP3-201ENST00000420996 TRPV1Q8NER1 839 aa20.42■□□□□ 0.86
UPF3AP3-201ENST00000420996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.42■□□□□ 0.86
UPF3AP3-201ENST00000420996 MOV10L1Q9BXT6 1211 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms