RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 USP17L10C9JJH3 530 aa25.58■■□□□ 1.69
CPNE1-211ENST00000420363 FMNL1O95466 1100 aaPredicted RBP25.58■■□□□ 1.69
CPNE1-211ENST00000420363 PABPC4Q13310 644 aaKnown RBP eCLIP25.58■■□□□ 1.69
CPNE1-211ENST00000420363 MTMR2Q13614 643 aa25.58■■□□□ 1.69
CPNE1-211ENST00000420363 PNMA3Q9UL41 463 aa25.58■■□□□ 1.69
CPNE1-211ENST00000420363 SLC44A5Q8NCS7 719 aa25.57■■□□□ 1.68
CPNE1-211ENST00000420363 DYNLL2Q96FJ2 89 aa25.57■■□□□ 1.68
CPNE1-211ENST00000420363 CCDC17Q96LX7 622 aa25.57■■□□□ 1.68
CPNE1-211ENST00000420363 NACAP1Q9BZK3 213 aa25.57■■□□□ 1.68
CPNE1-211ENST00000420363 HELLSQ9NRZ9 838 aa25.57■■□□□ 1.68
CPNE1-211ENST00000420363 GREB1LQ9C091 1923 aaPredicted RBP25.57■■□□□ 1.68
CPNE1-211ENST00000420363 RBBP6Q7Z6E9 1792 aaKnown RBP25.56■■□□□ 1.68
CPNE1-211ENST00000420363 CYP2D7A0A087X1C5 515 aa25.56■■□□□ 1.68
CPNE1-211ENST00000420363 TRIM6-TRIM34B2RNG4 842 aa25.56■■□□□ 1.68
CPNE1-211ENST00000420363 PATL2C9JE40 543 aaKnown RBP25.56■■□□□ 1.68
CPNE1-211ENST00000420363 TREML2Q5T2D2 321 aa25.56■■□□□ 1.68
CPNE1-211ENST00000420363 TMEM179Q6ZVK1 233 aa25.56■■□□□ 1.68
CPNE1-211ENST00000420363 TRIM47Q96LD4 638 aa25.56■■□□□ 1.68
CPNE1-211ENST00000420363 TMOD4Q9NZQ9 345 aa25.56■■□□□ 1.68
CPNE1-211ENST00000420363 SRRDQ9UH36 339 aa25.56■■□□□ 1.68
CPNE1-211ENST00000420363 BRCA2P51587 3418 aa25.56■■□□□ 1.68
CPNE1-211ENST00000420363 TDO2P48775 406 aa25.55■■□□□ 1.68
CPNE1-211ENST00000420363 CDK8P49336 464 aa25.55■■□□□ 1.68
CPNE1-211ENST00000420363 RAB3GAP1Q15042 981 aa25.55■■□□□ 1.68
CPNE1-211ENST00000420363 RAET1EQ8TD07 263 aa25.55■■□□□ 1.68
CPNE1-211ENST00000420363 C12orf42Q96LP6 360 aa25.55■■□□□ 1.68
CPNE1-211ENST00000420363 CYP2C8P10632 490 aa25.54■■□□□ 1.68
CPNE1-211ENST00000420363 BCRP11274 1271 aa25.54■■□□□ 1.68
CPNE1-211ENST00000420363 CTGFP29279 349 aa25.54■■□□□ 1.68
CPNE1-211ENST00000420363 GUCY1A2P33402 732 aa25.54■■□□□ 1.68
CPNE1-211ENST00000420363 USP14P54578 494 aa25.54■■□□□ 1.68
CPNE1-211ENST00000420363 KIAA1683Q9H0B3 1180 aa25.54■■□□□ 1.68
CPNE1-211ENST00000420363 APPP05067 770 aa25.53■■□□□ 1.68
CPNE1-211ENST00000420363 OSBPP22059 807 aa25.53■■□□□ 1.68
CPNE1-211ENST00000420363 PDE4AP27815 886 aa25.53■■□□□ 1.68
CPNE1-211ENST00000420363 USP17L2Q6R6M4 530 aa25.53■■□□□ 1.68
CPNE1-211ENST00000420363 IFNL3Q8IZI9 196 aa25.53■■□□□ 1.68
CPNE1-211ENST00000420363 RILPL2Q969X0 211 aa25.53■■□□□ 1.68
CPNE1-211ENST00000420363 A0A0D9SFI3 127 aa25.52■■□□□ 1.68
CPNE1-211ENST00000420363 SMIM22K7EJ46 135 aa25.52■■□□□ 1.68
CPNE1-211ENST00000420363 HOXA7P31268 230 aaPredicted RBP25.52■■□□□ 1.68
CPNE1-211ENST00000420363 HABP4Q5JVS0 413 aaKnown RBP25.52■■□□□ 1.68
CPNE1-211ENST00000420363 SMCR8Q8TEV9 937 aaPredicted RBP25.52■■□□□ 1.68
CPNE1-211ENST00000420363 FEZ1Q99689 392 aa25.52■■□□□ 1.68
CPNE1-211ENST00000420363 ZSWIM8A7E2V4 1837 aa25.51■■□□□ 1.67
CPNE1-211ENST00000420363 MPHOSPH10O00566 681 aaKnown RBP25.51■■□□□ 1.67
CPNE1-211ENST00000420363 SEPT2Q15019 361 aa25.51■■□□□ 1.67
CPNE1-211ENST00000420363 MCMDC2Q4G0Z9 681 aa25.51■■□□□ 1.67
CPNE1-211ENST00000420363 NAPBQ9H115 298 aa25.51■■□□□ 1.67
CPNE1-211ENST00000420363 ZNF287Q9HBT7 754 aa25.51■■□□□ 1.67
CPNE1-211ENST00000420363 HIP1O00291 1037 aa25.5■■□□□ 1.67
CPNE1-211ENST00000420363 FOXP2O15409 715 aa25.5■■□□□ 1.67
CPNE1-211ENST00000420363 MGAMO43451 1857 aa25.5■■□□□ 1.67
CPNE1-211ENST00000420363 ZMYM6O95789 1325 aa25.5■■□□□ 1.67
CPNE1-211ENST00000420363 AKR1B1P15121 316 aa25.5■■□□□ 1.67
CPNE1-211ENST00000420363 GRK4P32298 578 aa25.5■■□□□ 1.67
CPNE1-211ENST00000420363 GCLCP48506 637 aaPredicted RBP25.5■■□□□ 1.67
CPNE1-211ENST00000420363 FCGRTP55899 365 aa25.5■■□□□ 1.67
CPNE1-211ENST00000420363 CCDC129Q6ZRS4 1044 aa25.5■■□□□ 1.67
CPNE1-211ENST00000420363 MYPNQ86TC9 1320 aa25.5■■□□□ 1.67
CPNE1-211ENST00000420363 FAM227BQ96M60 508 aa25.5■■□□□ 1.67
CPNE1-211ENST00000420363 EMILIN3Q9NT22 766 aa25.5■■□□□ 1.67
CPNE1-211ENST00000420363 BIN2Q9UBW5 565 aaPredicted RBP25.5■■□□□ 1.67
CPNE1-211ENST00000420363 MINDY4BA8MYZ0 360 aa25.49■■□□□ 1.67
CPNE1-211ENST00000420363 SDSP20132 328 aa25.49■■□□□ 1.67
CPNE1-211ENST00000420363 NMIQ13287 307 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-211ENST00000420363 MTFR1Q15390 333 aa25.49■■□□□ 1.67
CPNE1-211ENST00000420363 TTC22Q5TAA0 569 aa25.49■■□□□ 1.67
CPNE1-211ENST00000420363 ASCC2Q9H1I8 757 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-211ENST00000420363 SH2D4AQ9H788 454 aa25.49■■□□□ 1.67
CPNE1-211ENST00000420363 ICA1Q05084 483 aa25.48■■□□□ 1.67
CPNE1-211ENST00000420363 FAM110CQ1W6H9 321 aa25.48■■□□□ 1.67
CPNE1-211ENST00000420363 ACER1Q8TDN7 264 aa25.48■■□□□ 1.67
CPNE1-211ENST00000420363 PLIN4Q96Q06 1357 aa25.47■■□□□ 1.67
CPNE1-211ENST00000420363 CCDC171Q6TFL3 1326 aa25.47■■□□□ 1.67
CPNE1-211ENST00000420363 RASA1P20936 1047 aa25.47■■□□□ 1.67
CPNE1-211ENST00000420363 MFAP1P55081 439 aaKnown RBP25.47■■□□□ 1.67
CPNE1-211ENST00000420363 IRX3P78415 501 aaPredicted RBP25.47■■□□□ 1.67
CPNE1-211ENST00000420363 ALX1Q15699 326 aa25.47■■□□□ 1.67
CPNE1-211ENST00000420363 GTF3C2Q8WUA4 911 aaPredicted RBP25.47■■□□□ 1.67
CPNE1-211ENST00000420363 ARHGEF10LQ9HCE6 1279 aa25.47■■□□□ 1.67
CPNE1-211ENST00000420363 SLC3A2P08195 630 aaKnown RBP25.46■■□□□ 1.67
CPNE1-211ENST00000420363 VCAM1P19320 739 aa25.46■■□□□ 1.67
CPNE1-211ENST00000420363 PRKCZQ05513 592 aa25.46■■□□□ 1.67
CPNE1-211ENST00000420363 PPARAQ07869 468 aa25.46■■□□□ 1.67
CPNE1-211ENST00000420363 ZNF589Q86UQ0 364 aaPredicted RBP25.46■■□□□ 1.67
CPNE1-211ENST00000420363 NKX2-3Q8TAU0 364 aa25.46■■□□□ 1.67
CPNE1-211ENST00000420363 KANSL2Q9H9L4 492 aa25.46■■□□□ 1.67
CPNE1-211ENST00000420363 MKNK2Q9HBH9 465 aa25.46■■□□□ 1.67
CPNE1-211ENST00000420363 DIAPH3Q9NSV4 1193 aa25.46■■□□□ 1.67
CPNE1-211ENST00000420363 GSPT1P15170 499 aaKnown RBP25.45■■□□□ 1.66
CPNE1-211ENST00000420363 UBXN2AP68543 259 aa25.45■■□□□ 1.66
CPNE1-211ENST00000420363 PDE4BQ07343 736 aa25.45■■□□□ 1.66
CPNE1-211ENST00000420363 VPS53Q5VIR6 699 aa25.45■■□□□ 1.66
CPNE1-211ENST00000420363 CENPQQ7L2Z9 268 aaPredicted RBP25.45■■□□□ 1.66
CPNE1-211ENST00000420363 A0A1W2PRG0 241 aa25.44■■□□□ 1.66
CPNE1-211ENST00000420363 ZYXQ15942 572 aaKnown RBP25.44■■□□□ 1.66
CPNE1-211ENST00000420363 LPAR1Q92633 364 aa25.44■■□□□ 1.66
CPNE1-211ENST00000420363 RNF208Q9H0X6 261 aa25.44■■□□□ 1.66
CPNE1-211ENST00000420363 ANAPC4Q9UJX5 808 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms