RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 NEDD4P46934 1319 aa14.11□□□□□ -0.15
ATG4B-207ENST00000415107 PRDM1O75626 825 aa14.1□□□□□ -0.15
ATG4B-207ENST00000415107 CETPP11597 493 aa14.1□□□□□ -0.15
ATG4B-207ENST00000415107 HSPA4P34932 840 aa14.1□□□□□ -0.15
ATG4B-207ENST00000415107 BACE1P56817 501 aa14.1□□□□□ -0.15
ATG4B-207ENST00000415107 ICA1Q05084 483 aa14.1□□□□□ -0.15
ATG4B-207ENST00000415107 MOGSQ13724 837 aa14.1□□□□□ -0.15
ATG4B-207ENST00000415107 SEPT2Q15019 361 aa14.1□□□□□ -0.15
ATG4B-207ENST00000415107 SHROOM1Q2M3G4 852 aaPredicted RBP14.1□□□□□ -0.15
ATG4B-207ENST00000415107 C8orf34Q49A92 452 aa14.1□□□□□ -0.15
ATG4B-207ENST00000415107 CREB3L3Q68CJ9 461 aa14.1□□□□□ -0.15
ATG4B-207ENST00000415107 ESR2Q92731 530 aa14.1□□□□□ -0.15
ATG4B-207ENST00000415107 MKL1Q969V6 931 aa14.1□□□□□ -0.15
ATG4B-207ENST00000415107 SH2D4AQ9H788 454 aa14.1□□□□□ -0.15
ATG4B-207ENST00000415107 SLC45A1Q9Y2W3 748 aa14.1□□□□□ -0.15
ATG4B-207ENST00000415107 USP17L10C9JJH3 530 aa14.09□□□□□ -0.15
ATG4B-207ENST00000415107 SLC27A2O14975 620 aa14.09□□□□□ -0.15
ATG4B-207ENST00000415107 TSPY3P0CV98 308 aa14.09□□□□□ -0.15
ATG4B-207ENST00000415107 TSPY8P0CW00 308 aa14.09□□□□□ -0.15
ATG4B-207ENST00000415107 USP14P54578 494 aa14.09□□□□□ -0.15
ATG4B-207ENST00000415107 KIF23Q02241 960 aaPredicted RBP14.09□□□□□ -0.15
ATG4B-207ENST00000415107 CCDC178Q5BJE1 867 aa14.09□□□□□ -0.15
ATG4B-207ENST00000415107 PAXIP1Q6ZW49 1069 aaPredicted RBP14.09□□□□□ -0.15
ATG4B-207ENST00000415107 FASTKD5Q7L8L6 764 aaKnown RBP14.09□□□□□ -0.15
ATG4B-207ENST00000415107 SIAH1Q8IUQ4 282 aa14.09□□□□□ -0.15
ATG4B-207ENST00000415107 IL17RAQ96F46 866 aa14.09□□□□□ -0.15
ATG4B-207ENST00000415107 MTMR4Q9NYA4 1195 aa14.09□□□□□ -0.15
ATG4B-207ENST00000415107 TMX2Q9Y320 296 aa14.09□□□□□ -0.15
ATG4B-207ENST00000415107 TSPY2A6NKD2 308 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 E7EWF7 191 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 MPHOSPH10O00566 681 aaKnown RBP14.08□□□□□ -0.16
ATG4B-207ENST00000415107 TTLL1O95922 423 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 ALDH1A1P00352 501 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 TFAP4Q01664 338 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 MAP2K1Q02750 393 aaPredicted RBP14.08□□□□□ -0.16
ATG4B-207ENST00000415107 SPP2Q13103 211 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 KRT32Q14532 448 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 RAB3GAP1Q15042 981 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 NCOA7Q8NI08 942 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 BRI3BPQ8WY22 251 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 ANKS1AQ92625 1134 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 LPAR1Q92633 364 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 TTC14Q96N46 770 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 USP26Q9BXU7 913 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 ARHGEF10LQ9HCE6 1279 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 SAGE1Q9NXZ1 904 aa14.08□□□□□ -0.16
ATG4B-207ENST00000415107 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.08□□□□□ -0.16
ATG4B-207ENST00000415107 CCL15-CCL14A0A0B4J2E2 113 aa14.07□□□□□ -0.16
ATG4B-207ENST00000415107 CA12O43570 354 aa14.07□□□□□ -0.16
ATG4B-207ENST00000415107 RANBP6O60518 1105 aaKnown RBP14.07□□□□□ -0.16
ATG4B-207ENST00000415107 AOC2O75106 756 aa14.07□□□□□ -0.16
ATG4B-207ENST00000415107 ZKSCAN1P17029 563 aaPredicted RBP14.07□□□□□ -0.16
ATG4B-207ENST00000415107 TRDNQ13061 729 aa14.07□□□□□ -0.16
ATG4B-207ENST00000415107 CCL15Q16663 113 aa14.07□□□□□ -0.16
ATG4B-207ENST00000415107 STOX1Q6ZVD7 989 aa14.07□□□□□ -0.16
ATG4B-207ENST00000415107 ANKRD23Q86SG2 305 aa14.07□□□□□ -0.16
ATG4B-207ENST00000415107 MB21D2Q8IYB1 491 aaPredicted RBP14.07□□□□□ -0.16
ATG4B-207ENST00000415107 CEP95Q96GE4 821 aa14.07□□□□□ -0.16
ATG4B-207ENST00000415107 ZIC5Q96T25 663 aa14.07□□□□□ -0.16
ATG4B-207ENST00000415107 IL17RBQ9NRM6 502 aa14.07□□□□□ -0.16
ATG4B-207ENST00000415107 WDR19Q8NEZ3 1342 aa14.07□□□□□ -0.16
ATG4B-207ENST00000415107 MYH4Q9Y623 1939 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 A0A1W2PRG0 241 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 TRIM75PA6NK02 468 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 EEF2P13639 858 aaKnown RBP14.06□□□□□ -0.16
ATG4B-207ENST00000415107 HOXA7P31268 230 aaPredicted RBP14.06□□□□□ -0.16
ATG4B-207ENST00000415107 MTMR2Q13614 643 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 NOM1Q5C9Z4 860 aaKnown RBP14.06□□□□□ -0.16
ATG4B-207ENST00000415107 FAM47AQ5JRC9 791 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 OTUD7BQ6GQQ9 843 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 USP17L2Q6R6M4 530 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 CCDC84Q86UT8 332 aaPredicted RBP14.06□□□□□ -0.16
ATG4B-207ENST00000415107 IQCA1Q86XH1 822 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 DGKHQ86XP1 1220 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 IFNL1Q8IU54 200 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 GMCL1P1Q8NEA9 526 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 PTPN18Q99952 460 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 VCPKMTQ9H867 229 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 INCENPQ9NQS7 918 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 AGTPBP1Q9UPW5 1226 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 TAF6LQ9Y6J9 622 aa14.06□□□□□ -0.16
ATG4B-207ENST00000415107 B4E1Z4 1266 aa14.05□□□□□ -0.16
ATG4B-207ENST00000415107 IGF2BP3O00425 579 aaKnown RBP eCLIP14.05□□□□□ -0.16
ATG4B-207ENST00000415107 KDM4AO75164 1064 aa14.05□□□□□ -0.16
ATG4B-207ENST00000415107 ANAPC15P60006 121 aa14.05□□□□□ -0.16
ATG4B-207ENST00000415107 RRP12Q5JTH9 1297 aaKnown RBP14.05□□□□□ -0.16
ATG4B-207ENST00000415107 GPAT2Q6NUI2 795 aa14.05□□□□□ -0.16
ATG4B-207ENST00000415107 RALYLQ86SE5 291 aaKnown RBP14.05□□□□□ -0.16
ATG4B-207ENST00000415107 RASEFQ8IZ41 740 aa14.05□□□□□ -0.16
ATG4B-207ENST00000415107 STK11IPQ8N1F8 1099 aa14.05□□□□□ -0.16
ATG4B-207ENST00000415107 ACER1Q8TDN7 264 aa14.05□□□□□ -0.16
ATG4B-207ENST00000415107 EMILIN3Q9NT22 766 aa14.05□□□□□ -0.16
ATG4B-207ENST00000415107 WBP1LQ9NX94 342 aa14.05□□□□□ -0.16
ATG4B-207ENST00000415107 ZSWIM5Q9P217 1185 aa14.05□□□□□ -0.16
ATG4B-207ENST00000415107 WDR46O15213 610 aaKnown RBP14.04□□□□□ -0.16
ATG4B-207ENST00000415107 HMGB1P09429 215 aaKnown RBP14.04□□□□□ -0.16
ATG4B-207ENST00000415107 MCCP23508 829 aa14.04□□□□□ -0.16
ATG4B-207ENST00000415107 HMGCS2P54868 508 aa14.04□□□□□ -0.16
ATG4B-207ENST00000415107 PABPC4Q13310 644 aaKnown RBP eCLIP14.04□□□□□ -0.16
ATG4B-207ENST00000415107 RCSD1Q6JBY9 416 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms