RNA–Protein interactions for RNA: ENST00000413879.1

AC004987.3-201, humanhuman

BASIC

Gene AC004987.3, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004987.3-201ENST00000413879 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.78□□□□□ -1.48
AC004987.3-201ENST00000413879 ZNF654Q8IZM8 581 aa5.78□□□□□ -1.48
AC004987.3-201ENST00000413879 DIRC2Q96SL1 478 aa5.78□□□□□ -1.48
AC004987.3-201ENST00000413879 SRCIN1Q9C0H9 1055 aa5.78□□□□□ -1.48
AC004987.3-201ENST00000413879 EHD4Q9H223 541 aa5.78□□□□□ -1.48
AC004987.3-201ENST00000413879 TNKS2Q9H2K2 1166 aa5.78□□□□□ -1.48
AC004987.3-201ENST00000413879 ZNF576Q9H609 170 aa5.78□□□□□ -1.48
AC004987.3-201ENST00000413879 BCCIPQ9P287 314 aaKnown RBP eCLIP5.78□□□□□ -1.48
AC004987.3-201ENST00000413879 GTF2IRD1Q9UHL9 959 aa5.78□□□□□ -1.48
AC004987.3-201ENST00000413879 LOC102724159A0A0B4J2E5 919 aa5.77□□□□□ -1.49
AC004987.3-201ENST00000413879 CTSHP09668 335 aa5.77□□□□□ -1.49
AC004987.3-201ENST00000413879 GRM2Q14416 872 aa5.77□□□□□ -1.49
AC004987.3-201ENST00000413879 PWP2Q15269 919 aaKnown RBP5.77□□□□□ -1.49
AC004987.3-201ENST00000413879 ZNF746Q6NUN9 644 aaPredicted RBP5.77□□□□□ -1.49
AC004987.3-201ENST00000413879 PMFBP1Q8TBY8 1022 aa5.77□□□□□ -1.49
AC004987.3-201ENST00000413879 MRFAP1L1Q96HT8 127 aa5.77□□□□□ -1.49
AC004987.3-201ENST00000413879 KRTAP9-3Q9BYQ3 159 aa5.77□□□□□ -1.49
AC004987.3-201ENST00000413879 NSUN3Q9H649 340 aaKnown RBP5.77□□□□□ -1.49
AC004987.3-201ENST00000413879 TRAK1Q9UPV9 953 aa5.77□□□□□ -1.49
AC004987.3-201ENST00000413879 INPP5FQ9Y2H2 1132 aa5.77□□□□□ -1.49
AC004987.3-201ENST00000413879 TPD52L2O43399 206 aaKnown RBP5.76□□□□□ -1.49
AC004987.3-201ENST00000413879 ZNF862O60290 1169 aa5.76□□□□□ -1.49
AC004987.3-201ENST00000413879 GSTT1P30711 240 aa5.76□□□□□ -1.49
AC004987.3-201ENST00000413879 TAF1CQ15572 869 aaPredicted RBP5.76□□□□□ -1.49
AC004987.3-201ENST00000413879 KIAA0319Q5VV43 1072 aa5.76□□□□□ -1.49
AC004987.3-201ENST00000413879 CCAR1Q8IX12 1150 aaKnown RBP5.76□□□□□ -1.49
AC004987.3-201ENST00000413879 UBE2Q2Q8WVN8 375 aa5.76□□□□□ -1.49
AC004987.3-201ENST00000413879 HEXIM2Q96MH2 286 aaKnown RBP5.76□□□□□ -1.49
AC004987.3-201ENST00000413879 PRKAB1Q9Y478 270 aa5.76□□□□□ -1.49
AC004987.3-201ENST00000413879 KRT1P04264 644 aa5.75□□□□□ -1.49
AC004987.3-201ENST00000413879 KCNA10Q16322 511 aa5.75□□□□□ -1.49
AC004987.3-201ENST00000413879 TAF7LQ5H9L4 462 aa5.75□□□□□ -1.49
AC004987.3-201ENST00000413879 ATG14Q6ZNE5 492 aa5.75□□□□□ -1.49
AC004987.3-201ENST00000413879 CKAP2LQ8IYA6 745 aa5.75□□□□□ -1.49
AC004987.3-201ENST00000413879 MORC4Q8TE76 937 aa5.75□□□□□ -1.49
AC004987.3-201ENST00000413879 CCDC136Q96JN2 1154 aa5.75□□□□□ -1.49
AC004987.3-201ENST00000413879 ACBD3Q9H3P7 528 aa5.75□□□□□ -1.49
AC004987.3-201ENST00000413879 TTF2Q9UNY4 1162 aaKnown RBP5.75□□□□□ -1.49
AC004987.3-201ENST00000413879 TCAF2A6NFQ2 919 aa5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 GNAT3A8MTJ3 354 aa5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 PPP1R12AO14974 1030 aaPredicted RBP5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 EIF3JO75822 258 aaKnown RBP5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 XRCC5P13010 732 aaKnown RBP5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 ITPKAP23677 461 aa5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 FCGRTP55899 365 aa5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 KIF4BQ2VIQ3 1234 aa5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 MEI1Q5TIA1 1274 aa5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 DTHD1Q6ZMT9 781 aa5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 HS2ST1Q7LGA3 356 aa5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 TICAM2Q86XR7 235 aa5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 KCNN1Q92952 543 aa5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 MKL1Q969V6 931 aa5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 RELTQ969Z4 430 aa5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 DCP1AQ9NPI6 582 aaPredicted RBP5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 AKAP2Q9Y2D5 859 aa5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 SUGT1Q9Y2Z0 365 aa5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 USP31Q70CQ4 1352 aa5.74□□□□□ -1.49
AC004987.3-201ENST00000413879 ENPP3O14638 875 aa5.73□□□□□ -1.49
AC004987.3-201ENST00000413879 GSTP1P09211 210 aaKnown RBP5.73□□□□□ -1.49
AC004987.3-201ENST00000413879 ST13P50502 369 aaKnown RBP5.73□□□□□ -1.49
AC004987.3-201ENST00000413879 NLGN1Q8N2Q7 840 aa5.73□□□□□ -1.49
AC004987.3-201ENST00000413879 ISL2Q96A47 359 aa5.73□□□□□ -1.49
AC004987.3-201ENST00000413879 GPATCH3Q96I76 525 aa5.73□□□□□ -1.49
AC004987.3-201ENST00000413879 KRTAP17-1Q9BYP8 105 aa5.73□□□□□ -1.49
AC004987.3-201ENST00000413879 SLKQ9H2G2 1235 aaPredicted RBP5.73□□□□□ -1.49
AC004987.3-201ENST00000413879 CARS2Q9HA77 564 aaKnown RBP5.73□□□□□ -1.49
AC004987.3-201ENST00000413879 KCNK12Q9HB15 430 aa5.73□□□□□ -1.49
AC004987.3-201ENST00000413879 KRT82Q9NSB4 513 aa5.73□□□□□ -1.49
AC004987.3-201ENST00000413879 GGT7Q9UJ14 662 aa5.73□□□□□ -1.49
AC004987.3-201ENST00000413879 TMEM238LA0A1B0GVL6 79 aa5.72□□□□□ -1.49
AC004987.3-201ENST00000413879 IGF2BP3O00425 579 aaKnown RBP eCLIP5.72□□□□□ -1.49
AC004987.3-201ENST00000413879 NUAK1O60285 661 aa5.72□□□□□ -1.49
AC004987.3-201ENST00000413879 HOXA5P20719 270 aa5.72□□□□□ -1.49
AC004987.3-201ENST00000413879 PTPN12Q05209 780 aaKnown RBP5.72□□□□□ -1.49
AC004987.3-201ENST00000413879 TCEAL1Q15170 157 aa5.72□□□□□ -1.49
AC004987.3-201ENST00000413879 PRPF40BQ6NWY9 871 aaKnown RBP5.72□□□□□ -1.49
AC004987.3-201ENST00000413879 SPACA3Q8IXA5 215 aa5.72□□□□□ -1.49
AC004987.3-201ENST00000413879 EXOC8Q8IYI6 725 aa5.72□□□□□ -1.49
AC004987.3-201ENST00000413879 PIF1Q9H611 641 aa5.72□□□□□ -1.49
AC004987.3-201ENST00000413879 DDX41Q9UJV9 622 aaKnown RBP5.72□□□□□ -1.49
AC004987.3-201ENST00000413879 JAG2Q9Y219 1238 aa5.72□□□□□ -1.49
AC004987.3-201ENST00000413879 DNAJC6O75061 913 aa5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 NEFMP07197 916 aa5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 GDNFP39905 211 aa5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 NKPD1Q17RQ9 610 aa5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 ZNF394Q53GI3 561 aa5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 FAM214BQ7L5A3 538 aa5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 USP48Q86UV5 1035 aa5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 RNF214Q8ND24 703 aa5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 C20orf173Q96LM9 149 aa5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 SPC25Q9HBM1 224 aa5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 ABCB6Q9NP58 842 aa5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 PRDM10Q9NQV6 1147 aa5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 SMG5Q9UPR3 1016 aaKnown RBP5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 PCDHGC5Q9Y5F6 944 aa5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 COL4A3BPQ9Y5P4 624 aa5.71□□□□□ -1.5
AC004987.3-201ENST00000413879 ETV2O00321 342 aaPredicted RBP5.7□□□□□ -1.5
AC004987.3-201ENST00000413879 CLCN7P51798 805 aa5.7□□□□□ -1.5
AC004987.3-201ENST00000413879 BMS1Q14692 1282 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms