RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 IGKV6D-41A0A0C4DH26 115 aa36.15■■■■□ 3.38
CSNK1E-206ENST00000413574 COL9A3Q14050 684 aaPredicted RBP36.15■■■■□ 3.38
CSNK1E-206ENST00000413574 DNAJC5GQ8N7S2 189 aa36.15■■■■□ 3.38
CSNK1E-206ENST00000413574 CEP95Q96GE4 821 aa36.15■■■■□ 3.38
CSNK1E-206ENST00000413574 CNNM2Q9H8M5 875 aa36.15■■■■□ 3.38
CSNK1E-206ENST00000413574 IL17RBQ9NRM6 502 aa36.15■■■■□ 3.38
CSNK1E-206ENST00000413574 EPB41L2O43491 1005 aaKnown RBP36.14■■■■□ 3.38
CSNK1E-206ENST00000413574 ICA1Q05084 483 aa36.14■■■■□ 3.38
CSNK1E-206ENST00000413574 WDR18Q9BV38 432 aa36.14■■■■□ 3.38
CSNK1E-206ENST00000413574 KRT23Q9C075 422 aa36.14■■■■□ 3.38
CSNK1E-206ENST00000413574 AS3MTQ9HBK9 375 aa36.14■■■■□ 3.38
CSNK1E-206ENST00000413574 ZSWIM5Q9P217 1185 aa36.14■■■■□ 3.38
CSNK1E-206ENST00000413574 PLIN4Q96Q06 1357 aa36.14■■■■□ 3.38
CSNK1E-206ENST00000413574 MYH4Q9Y623 1939 aa36.13■■■■□ 3.37
CSNK1E-206ENST00000413574 DGKZQ13574 1117 aa36.13■■■■□ 3.37
CSNK1E-206ENST00000413574 KANSL2Q9H9L4 492 aa36.13■■■■□ 3.37
CSNK1E-206ENST00000413574 KCNH4Q9UQ05 1017 aa36.13■■■■□ 3.37
CSNK1E-206ENST00000413574 A0A1W2PRG0 241 aa36.12■■■■□ 3.37
CSNK1E-206ENST00000413574 ATP2B2Q01814 1243 aa36.12■■■■□ 3.37
CSNK1E-206ENST00000413574 KIF23Q02241 960 aaPredicted RBP36.12■■■■□ 3.37
CSNK1E-206ENST00000413574 TRDNQ13061 729 aa36.12■■■■□ 3.37
CSNK1E-206ENST00000413574 NOGQ13253 232 aa36.12■■■■□ 3.37
CSNK1E-206ENST00000413574 KCNB2Q92953 911 aa36.12■■■■□ 3.37
CSNK1E-206ENST00000413574 MS4A4AQ96JQ5 239 aa36.12■■■■□ 3.37
CSNK1E-206ENST00000413574 ZKSCAN3Q9BRR0 538 aa36.12■■■■□ 3.37
CSNK1E-206ENST00000413574 EEF2P13639 858 aaKnown RBP36.12■■■■□ 3.37
CSNK1E-206ENST00000413574 CYB5R4Q7L1T6 521 aa36.12■■■■□ 3.37
CSNK1E-206ENST00000413574 SNX14Q9Y5W7 946 aa36.12■■■■□ 3.37
CSNK1E-206ENST00000413574 ZKSCAN1P17029 563 aaPredicted RBP36.11■■■■□ 3.37
CSNK1E-206ENST00000413574 MTMR2Q13614 643 aa36.11■■■■□ 3.37
CSNK1E-206ENST00000413574 ADCK5Q3MIX3 580 aa36.11■■■■□ 3.37
CSNK1E-206ENST00000413574 NCOA7Q8NI08 942 aa36.11■■■■□ 3.37
CSNK1E-206ENST00000413574 MTMR4Q9NYA4 1195 aa36.11■■■■□ 3.37
CSNK1E-206ENST00000413574 SNAPC2Q13487 334 aa36.1■■■■□ 3.37
CSNK1E-206ENST00000413574 ZYXQ15942 572 aaKnown RBP36.1■■■■□ 3.37
CSNK1E-206ENST00000413574 RALYLQ86SE5 291 aaKnown RBP36.1■■■■□ 3.37
CSNK1E-206ENST00000413574 TBC1D2Q9BYX2 928 aa36.1■■■■□ 3.37
CSNK1E-206ENST00000413574 CXCL11O14625 94 aa36.09■■■■□ 3.37
CSNK1E-206ENST00000413574 TSGA10IPQ3SY00 556 aa36.09■■■■□ 3.37
CSNK1E-206ENST00000413574 CHST3Q7LGC8 479 aa36.09■■■■□ 3.37
CSNK1E-206ENST00000413574 USP17L10C9JJH3 530 aa36.08■■■■□ 3.37
CSNK1E-206ENST00000413574 GTF2A2P52657 109 aa36.08■■■■□ 3.37
CSNK1E-206ENST00000413574 FEZ1Q99689 392 aa36.08■■■■□ 3.37
CSNK1E-206ENST00000413574 CLIP2Q9UDT6 1046 aa36.08■■■■□ 3.37
CSNK1E-206ENST00000413574 EIF5BO60841 1220 aaKnown RBP36.08■■■■□ 3.37
CSNK1E-206ENST00000413574 HMGCS2P54868 508 aa36.08■■■■□ 3.37
CSNK1E-206ENST00000413574 BACE1P56817 501 aa36.08■■■■□ 3.37
CSNK1E-206ENST00000413574 MB21D2Q8IYB1 491 aaPredicted RBP36.08■■■■□ 3.37
CSNK1E-206ENST00000413574 THSD7BQ9C0I4 1608 aa36.08■■■■□ 3.37
CSNK1E-206ENST00000413574 A0A0G2JLL6 359 aaPredicted RBP36.07■■■■□ 3.36
CSNK1E-206ENST00000413574 MCCP23508 829 aa36.07■■■■□ 3.36
CSNK1E-206ENST00000413574 PRRT2Q7Z6L0 340 aaPredicted RBP36.07■■■■□ 3.36
CSNK1E-206ENST00000413574 ARHGEF10LQ9HCE6 1279 aa36.07■■■■□ 3.36
CSNK1E-206ENST00000413574 CCL15-CCL14A0A0B4J2E2 113 aa36.06■■■■□ 3.36
CSNK1E-206ENST00000413574 MOGSQ13724 837 aa36.06■■■■□ 3.36
CSNK1E-206ENST00000413574 CCL15Q16663 113 aa36.06■■■■□ 3.36
CSNK1E-206ENST00000413574 BRI3BPQ8WY22 251 aa36.06■■■■□ 3.36
CSNK1E-206ENST00000413574 TCP11L1Q9NUJ3 509 aa36.06■■■■□ 3.36
CSNK1E-206ENST00000413574 STX8Q9UNK0 236 aa36.06■■■■□ 3.36
CSNK1E-206ENST00000413574 MANSC4A6NHS7 340 aaPredicted RBP36.05■■■■□ 3.36
CSNK1E-206ENST00000413574 NYAP2Q9P242 653 aa36.05■■■■□ 3.36
CSNK1E-206ENST00000413574 TTLL1O95922 423 aa36.05■■■■□ 3.36
CSNK1E-206ENST00000413574 ANTXR2P58335 489 aa36.05■■■■□ 3.36
CSNK1E-206ENST00000413574 NEK1Q96PY6 1258 aa36.05■■■■□ 3.36
CSNK1E-206ENST00000413574 PTPN18Q99952 460 aa36.05■■■■□ 3.36
CSNK1E-206ENST00000413574 TMX2Q9Y320 296 aa36.05■■■■□ 3.36
CSNK1E-206ENST00000413574 CETPP11597 493 aa36.04■■■■□ 3.36
CSNK1E-206ENST00000413574 MAP2K2P36507 400 aa36.04■■■■□ 3.36
CSNK1E-206ENST00000413574 GADL1Q6ZQY3 521 aa36.04■■■■□ 3.36
CSNK1E-206ENST00000413574 IQCA1Q86XH1 822 aa36.04■■■■□ 3.36
CSNK1E-206ENST00000413574 ZSCAN10Q96SZ4 725 aaPredicted RBP36.04■■■■□ 3.36
CSNK1E-206ENST00000413574 KIAA1683Q9H0B3 1180 aa36.04■■■■□ 3.36
CSNK1E-206ENST00000413574 EMILIN3Q9NT22 766 aa36.04■■■■□ 3.36
CSNK1E-206ENST00000413574 LOC285556D6RIA3 1793 aa36.04■■■■□ 3.36
CSNK1E-206ENST00000413574 NT5C2P49902 561 aa36.03■■■■□ 3.36
CSNK1E-206ENST00000413574 KIAA1755Q5JYT7 1200 aa36.03■■■■□ 3.36
CSNK1E-206ENST00000413574 RCSD1Q6JBY9 416 aa36.03■■■■□ 3.36
CSNK1E-206ENST00000413574 LRRC47Q8N1G4 583 aaKnown RBP36.03■■■■□ 3.36
CSNK1E-206ENST00000413574 KRT32Q14532 448 aa36.02■■■■□ 3.36
CSNK1E-206ENST00000413574 SH3D19Q5HYK7 790 aa36.02■■■■□ 3.36
CSNK1E-206ENST00000413574 JAKMIP1Q96N16 626 aaKnown RBP36.02■■■■□ 3.36
CSNK1E-206ENST00000413574 BACH2Q9BYV9 841 aa36.02■■■■□ 3.36
CSNK1E-206ENST00000413574 TESPA1A2RU30 521 aaPredicted RBP36.01■■■■□ 3.36
CSNK1E-206ENST00000413574 C19orf81C9J6K1 198 aa36.01■■■■□ 3.36
CSNK1E-206ENST00000413574 TNKSO95271 1327 aa36.01■■■■□ 3.36
CSNK1E-206ENST00000413574 CPA1P15085 419 aa36.01■■■■□ 3.36
CSNK1E-206ENST00000413574 NOVP48745 357 aa36.01■■■■□ 3.36
CSNK1E-206ENST00000413574 UBAC1Q9BSL1 405 aa36.01■■■■□ 3.36
CSNK1E-206ENST00000413574 ENAHQ8N8S7 591 aaPredicted RBP36.01■■■■□ 3.35
CSNK1E-206ENST00000413574 MKL1Q969V6 931 aa36.01■■■■□ 3.35
CSNK1E-206ENST00000413574 IGF2BP3O00425 579 aaKnown RBP eCLIP36■■■■□ 3.35
CSNK1E-206ENST00000413574 TM4SF4P48230 202 aa36■■■■□ 3.35
CSNK1E-206ENST00000413574 SREBF2Q12772 1141 aa36■■■■□ 3.35
CSNK1E-206ENST00000413574 TREML2Q5T2D2 321 aa36■■■■□ 3.35
CSNK1E-206ENST00000413574 USP17L2Q6R6M4 530 aa36■■■■□ 3.35
CSNK1E-206ENST00000413574 PRC1O43663 620 aa35.99■■■■□ 3.35
CSNK1E-206ENST00000413574 RAD21O60216 631 aa35.99■■■■□ 3.35
CSNK1E-206ENST00000413574 MCM5P33992 734 aa35.99■■■■□ 3.35
CSNK1E-206ENST00000413574 GPAT2Q6NUI2 795 aa35.99■■■■□ 3.35
CSNK1E-206ENST00000413574 SPICE1Q8N0Z3 855 aa35.99■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms