RNA–Protein interactions for RNA: ENST00000411265.1

RNU6-1001P-201, Transcript of RNA, U6 small nuclear 1001, pseudogene, humanhuman

BASIC

Gene RNU6-1001P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1001P-201ENST00000411265 HTR3BO95264 441 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 EIF4A3P38919 411 aaKnown RBP3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 TNK2Q07912 1038 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 TMPRSS7Q7RTY8 843 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 HOMEZQ8IX15 550 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 PHACTR4Q8IZ21 702 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 DNAJB8Q8NHS0 232 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 RIN3Q8TB24 985 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 RNF141Q8WVD5 230 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 FAM168AQ92567 244 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 ASPNQ9BXN1 380 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 LRRC3Q9BY71 257 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 KRTAP9-2Q9BYQ4 174 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 KCNQ5Q9NR82 932 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 SEMA3GQ9NS98 782 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 GGT7Q9UJ14 662 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 CEP131Q9UPN4 1083 aa3.9□□□□□ -1.79
RNU6-1001P-201ENST00000411265 GRIN3BO60391 1043 aa3.89□□□□□ -1.79
RNU6-1001P-201ENST00000411265 RAC2P15153 192 aa3.89□□□□□ -1.79
RNU6-1001P-201ENST00000411265 YBX3P16989 372 aaKnown RBP eCLIP3.89□□□□□ -1.79
RNU6-1001P-201ENST00000411265 KCNMB1Q16558 191 aa3.89□□□□□ -1.79
RNU6-1001P-201ENST00000411265 OGFOD2Q6N063 350 aa3.89□□□□□ -1.79
RNU6-1001P-201ENST00000411265 ZSWIM9Q86XI8 627 aa3.89□□□□□ -1.79
RNU6-1001P-201ENST00000411265 UBE2FQ969M7 185 aa3.89□□□□□ -1.79
RNU6-1001P-201ENST00000411265 CCDC74BQ96LY2 380 aa3.89□□□□□ -1.79
RNU6-1001P-201ENST00000411265 PRDM7Q9NQW5 492 aa3.89□□□□□ -1.79
RNU6-1001P-201ENST00000411265 GPATCH2Q9NW75 528 aa3.89□□□□□ -1.79
RNU6-1001P-201ENST00000411265 ZSWIM5Q9P217 1185 aa3.89□□□□□ -1.79
RNU6-1001P-201ENST00000411265 POLR3KQ9Y2Y1 108 aaPredicted RBP3.89□□□□□ -1.79
RNU6-1001P-201ENST00000411265 TLR3O15455 904 aaKnown RBP3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 RAG1P15918 1043 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 ZNF16P17020 682 aaPredicted RBP3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 GARTP22102 1010 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 AFMP43652 599 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 MFAP1P55081 439 aaKnown RBP3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 RNF4P78317 190 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 POU5F2Q8N7G0 328 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 DTWD2Q8NBA8 298 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 FBXO27Q8NI29 283 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 PPP1R13LQ8WUF5 828 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 TMEM40Q8WWA1 233 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 SYTL4Q96C24 671 aaPredicted RBP3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 ALPK1Q96QP1 1244 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 GPR62Q9BZJ7 368 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 COPRSQ9NQ92 184 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 GMIPQ9P107 970 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 CTNND2Q9UQB3 1225 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 CNTNAP4Q9C0A0 1308 aa3.88□□□□□ -1.79
RNU6-1001P-201ENST00000411265 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 UPK3BL1B0FP48 263 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 UPK3BL2E5RIL1 263 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 TPP2P29144 1249 aaPredicted RBP3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 LTKP29376 864 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 GBP1P32455 592 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 ZNF76P36508 570 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 GDNFP39905 211 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 APOBRQ0VD83 1088 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 FBXL19Q6PCT2 694 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 KIAA0825Q8IV33 1275 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 TMEM87AQ8NBN3 555 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 ZNF296Q8WUU4 475 aaPredicted RBP3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 Q96M66 194 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 KREMEN1Q96MU8 473 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 ASCC2Q9H1I8 757 aaPredicted RBP3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 METTL5Q9NRN9 209 aaKnown RBP3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 FAM53CQ9NYF3 392 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 SLAMF8Q9P0V8 285 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 DUSP13Q9UII6 198 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 PCDHB14Q9Y5E9 798 aa3.87□□□□□ -1.79
RNU6-1001P-201ENST00000411265 KRTAP9-6A0A140TA67 174 aa3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 RGS13O14921 159 aa3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 GREM1O60565 184 aa3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 FARP2O94887 1054 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 ATE1O95260 518 aa3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 ZNF165P49910 485 aa3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 RAD51AP2Q09MP3 1159 aa3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 PKN1Q16512 942 aa3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 CLEC16AQ2KHT3 1053 aa3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 LRRFIP1Q32MZ4 808 aaKnown RBP3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 OVOS1Q6IE37 1185 aa3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 CREG2Q8IUH2 290 aa3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 REXO1Q8N1G1 1221 aaKnown RBP3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 BAHD1Q8TBE0 780 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 KIRREL1Q96J84 757 aa3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 BRMS1Q9HCU9 246 aa3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 TMEM59LQ9UK28 342 aa3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 CARMIL2Q6F5E8 1435 aa3.86□□□□□ -1.79
RNU6-1001P-201ENST00000411265 LRRC10BA6NIK2 292 aa3.85□□□□□ -1.79
RNU6-1001P-201ENST00000411265 CHURC1-FNTBB4DL54 471 aa3.85□□□□□ -1.79
RNU6-1001P-201ENST00000411265 DNAJA2O60884 412 aa3.85□□□□□ -1.79
RNU6-1001P-201ENST00000411265 GLI1P08151 1106 aa3.85□□□□□ -1.79
RNU6-1001P-201ENST00000411265 SRFP11831 508 aa3.85□□□□□ -1.79
RNU6-1001P-201ENST00000411265 MCM4P33991 863 aa3.85□□□□□ -1.79
RNU6-1001P-201ENST00000411265 CCNFP41002 786 aa3.85□□□□□ -1.79
RNU6-1001P-201ENST00000411265 CRKP46108 304 aa3.85□□□□□ -1.79
RNU6-1001P-201ENST00000411265 EGR3Q06889 387 aa3.85□□□□□ -1.79
RNU6-1001P-201ENST00000411265 GAB4Q2WGN9 574 aa3.85□□□□□ -1.79
RNU6-1001P-201ENST00000411265 SEZ6Q53EL9 994 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms