RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 LBX1P52954 281 aa26.61■■□□□ 1.85
PTCD3-203ENST00000409783 HMGCS2P54868 508 aa26.61■■□□□ 1.85
PTCD3-203ENST00000409783 MTMR2Q13614 643 aa26.61■■□□□ 1.85
PTCD3-203ENST00000409783 ACER1Q8TDN7 264 aa26.61■■□□□ 1.85
PTCD3-203ENST00000409783 MKNK2Q9HBH9 465 aa26.61■■□□□ 1.85
PTCD3-203ENST00000409783 INCENPQ9NQS7 918 aa26.61■■□□□ 1.85
PTCD3-203ENST00000409783 PDE4BQ07343 736 aa26.6■■□□□ 1.85
PTCD3-203ENST00000409783 GADL1Q6ZQY3 521 aa26.6■■□□□ 1.85
PTCD3-203ENST00000409783 CLEC10AQ8IUN9 316 aa26.6■■□□□ 1.85
PTCD3-203ENST00000409783 PROCA1Q8NCQ7 364 aaPredicted RBP26.6■■□□□ 1.85
PTCD3-203ENST00000409783 A0A1W2PRG0 241 aa26.59■■□□□ 1.85
PTCD3-203ENST00000409783 C19orf81C9J6K1 198 aa26.59■■□□□ 1.85
PTCD3-203ENST00000409783 SLC3A2P08195 630 aaKnown RBP26.59■■□□□ 1.85
PTCD3-203ENST00000409783 PTH1RQ03431 593 aa26.59■■□□□ 1.85
PTCD3-203ENST00000409783 CRHR2Q13324 411 aa26.59■■□□□ 1.85
PTCD3-203ENST00000409783 TREML2Q5T2D2 321 aa26.59■■□□□ 1.85
PTCD3-203ENST00000409783 ZNF287Q9HBT7 754 aa26.59■■□□□ 1.85
PTCD3-203ENST00000409783 CASP8AP2Q9UKL3 1982 aa26.58■■□□□ 1.85
PTCD3-203ENST00000409783 IGKV6D-41A0A0C4DH26 115 aa26.58■■□□□ 1.85
PTCD3-203ENST00000409783 PDHXO00330 501 aa26.58■■□□□ 1.85
PTCD3-203ENST00000409783 HAND2P61296 217 aa26.58■■□□□ 1.85
PTCD3-203ENST00000409783 TAF1CQ15572 869 aaPredicted RBP26.58■■□□□ 1.85
PTCD3-203ENST00000409783 ESYT1Q9BSJ8 1104 aa26.58■■□□□ 1.85
PTCD3-203ENST00000409783 KIAA1683Q9H0B3 1180 aa26.58■■□□□ 1.85
PTCD3-203ENST00000409783 EMILIN3Q9NT22 766 aa26.58■■□□□ 1.85
PTCD3-203ENST00000409783 AGTPBP1Q9UPW5 1226 aa26.58■■□□□ 1.85
PTCD3-203ENST00000409783 PLIN4Q96Q06 1357 aa26.58■■□□□ 1.84
PTCD3-203ENST00000409783 NOM1Q5C9Z4 860 aaKnown RBP26.57■■□□□ 1.84
PTCD3-203ENST00000409783 ZNF444Q8N0Y2 327 aaPredicted RBP26.57■■□□□ 1.84
PTCD3-203ENST00000409783 C12orf42Q96LP6 360 aa26.57■■□□□ 1.84
PTCD3-203ENST00000409783 PRDM10Q9NQV6 1147 aa26.57■■□□□ 1.84
PTCD3-203ENST00000409783 SLC45A1Q9Y2W3 748 aa26.57■■□□□ 1.84
PTCD3-203ENST00000409783 ORC4O43929 436 aa26.56■■□□□ 1.84
PTCD3-203ENST00000409783 ICA1Q05084 483 aa26.56■■□□□ 1.84
PTCD3-203ENST00000409783 TBC1D10CQ8IV04 446 aa26.56■■□□□ 1.84
PTCD3-203ENST00000409783 NEDD1Q8NHV4 660 aa26.56■■□□□ 1.84
PTCD3-203ENST00000409783 KANSL2Q9H9L4 492 aa26.56■■□□□ 1.84
PTCD3-203ENST00000409783 ADGRA2Q96PE1 1338 aa26.56■■□□□ 1.84
PTCD3-203ENST00000409783 CDC45O75419 566 aa26.55■■□□□ 1.84
PTCD3-203ENST00000409783 USP17L2Q6R6M4 530 aa26.55■■□□□ 1.84
PTCD3-203ENST00000409783 GPR25O00155 361 aa26.54■■□□□ 1.84
PTCD3-203ENST00000409783 EEF2P13639 858 aaKnown RBP26.54■■□□□ 1.84
PTCD3-203ENST00000409783 FAM47AQ5JRC9 791 aa26.54■■□□□ 1.84
PTCD3-203ENST00000409783 AKNAD1Q5T1N1 836 aa26.54■■□□□ 1.84
PTCD3-203ENST00000409783 NKX2-3Q8TAU0 364 aa26.54■■□□□ 1.84
PTCD3-203ENST00000409783 STAG1Q8WVM7 1258 aa26.54■■□□□ 1.84
PTCD3-203ENST00000409783 ZFYVE28Q9HCC9 887 aa26.54■■□□□ 1.84
PTCD3-203ENST00000409783 CTNNA3Q9UI47 895 aa26.54■■□□□ 1.84
PTCD3-203ENST00000409783 TMX2Q9Y320 296 aa26.54■■□□□ 1.84
PTCD3-203ENST00000409783 MYH4Q9Y623 1939 aa26.53■■□□□ 1.84
PTCD3-203ENST00000409783 ZNF213O14771 459 aa26.53■■□□□ 1.84
PTCD3-203ENST00000409783 USP14P54578 494 aa26.53■■□□□ 1.84
PTCD3-203ENST00000409783 TFAP4Q01664 338 aa26.53■■□□□ 1.84
PTCD3-203ENST00000409783 ZYXQ15942 572 aaKnown RBP26.53■■□□□ 1.84
PTCD3-203ENST00000409783 MAP4K1Q92918 833 aa26.53■■□□□ 1.84
PTCD3-203ENST00000409783 FEZ1Q99689 392 aa26.53■■□□□ 1.84
PTCD3-203ENST00000409783 LSG1Q9H089 658 aaKnown RBP26.53■■□□□ 1.84
PTCD3-203ENST00000409783 TMOD4Q9NZQ9 345 aa26.53■■□□□ 1.84
PTCD3-203ENST00000409783 TLR2O60603 784 aa26.52■■□□□ 1.84
PTCD3-203ENST00000409783 CYP2C8P10632 490 aa26.52■■□□□ 1.84
PTCD3-203ENST00000409783 HOXA7P31268 230 aaPredicted RBP26.52■■□□□ 1.84
PTCD3-203ENST00000409783 KIAA1755Q5JYT7 1200 aa26.52■■□□□ 1.84
PTCD3-203ENST00000409783 NYAP2Q9P242 653 aa26.52■■□□□ 1.84
PTCD3-203ENST00000409783 TSPY3P0CV98 308 aa26.51■■□□□ 1.83
PTCD3-203ENST00000409783 TSPY8P0CW00 308 aa26.51■■□□□ 1.83
PTCD3-203ENST00000409783 PCP11498 1178 aaKnown RBP26.51■■□□□ 1.83
PTCD3-203ENST00000409783 IMMTQ16891 758 aaKnown RBP26.51■■□□□ 1.83
PTCD3-203ENST00000409783 ZNF296Q8WUU4 475 aaPredicted RBP26.51■■□□□ 1.83
PTCD3-203ENST00000409783 CEP95Q96GE4 821 aa26.51■■□□□ 1.83
PTCD3-203ENST00000409783 ARHGEF10LQ9HCE6 1279 aa26.51■■□□□ 1.83
PTCD3-203ENST00000409783 MTMR4Q9NYA4 1195 aa26.51■■□□□ 1.83
PTCD3-203ENST00000409783 NEDD4P46934 1319 aa26.5■■□□□ 1.83
PTCD3-203ENST00000409783 C17orf99Q6UX52 265 aa26.5■■□□□ 1.83
PTCD3-203ENST00000409783 MFSD6Q6ZSS7 791 aa26.5■■□□□ 1.83
PTCD3-203ENST00000409783 PARK7Q99497 189 aaKnown RBP26.5■■□□□ 1.83
PTCD3-203ENST00000409783 IL17RBQ9NRM6 502 aa26.5■■□□□ 1.83
PTCD3-203ENST00000409783 U3KPZ7 1027 aaPredicted RBP26.5■■□□□ 1.83
PTCD3-203ENST00000409783 RANBP6O60518 1105 aaKnown RBP26.49■■□□□ 1.83
PTCD3-203ENST00000409783 VCAM1P19320 739 aa26.49■■□□□ 1.83
PTCD3-203ENST00000409783 ASCC2Q9H1I8 757 aaPredicted RBP26.49■■□□□ 1.83
PTCD3-203ENST00000409783 RNF41Q9H4P4 317 aaPredicted RBP26.49■■□□□ 1.83
PTCD3-203ENST00000409783 VCPKMTQ9H867 229 aa26.49■■□□□ 1.83
PTCD3-203ENST00000409783 TSPY2A6NKD2 308 aa26.48■■□□□ 1.83
PTCD3-203ENST00000409783 CYP21A2P08686 494 aa26.48■■□□□ 1.83
PTCD3-203ENST00000409783 NOVP48745 357 aa26.48■■□□□ 1.83
PTCD3-203ENST00000409783 PABPC4Q13310 644 aaKnown RBP eCLIP26.48■■□□□ 1.83
PTCD3-203ENST00000409783 MKL1Q969V6 931 aa26.48■■□□□ 1.83
PTCD3-203ENST00000409783 SH2D4AQ9H788 454 aa26.48■■□□□ 1.83
PTCD3-203ENST00000409783 RBM8AQ9Y5S9 174 aaKnown RBP26.48■■□□□ 1.83
PTCD3-203ENST00000409783 RLFQ13129 1914 aa26.47■■□□□ 1.83
PTCD3-203ENST00000409783 NMT2O60551 498 aa26.47■■□□□ 1.83
PTCD3-203ENST00000409783 FKTNO75072 461 aa26.47■■□□□ 1.83
PTCD3-203ENST00000409783 BCRP11274 1271 aa26.47■■□□□ 1.83
PTCD3-203ENST00000409783 ATP2B2Q01814 1243 aa26.47■■□□□ 1.83
PTCD3-203ENST00000409783 RRP12Q5JTH9 1297 aaKnown RBP26.47■■□□□ 1.83
PTCD3-203ENST00000409783 TOMM22Q9NS69 142 aa26.47■■□□□ 1.83
PTCD3-203ENST00000409783 CLIP2Q9UDT6 1046 aa26.47■■□□□ 1.83
PTCD3-203ENST00000409783 CPA4Q9UI42 421 aa26.47■■□□□ 1.83
PTCD3-203ENST00000409783 TAF6LQ9Y6J9 622 aa26.47■■□□□ 1.83
PTCD3-203ENST00000409783 COL13A1Q5TAT6 717 aaPredicted RBP26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms