RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 RESTQ13127 1097 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 LINC00301Q8NCQ3 95 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 SREK1Q8WXA9 508 aaKnown RBP19.63■□□□□ 0.73
SMPD4-202ENST00000409031 TMOD3Q9NYL9 352 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 TMEM110-MUSTN1A8MSY1 372 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 PPP6R2O75170 966 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 PPARDQ03181 441 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 SF3B2Q13435 895 aaKnown RBP19.63■□□□□ 0.73
SMPD4-202ENST00000409031 MUM1Q2TAK8 710 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 ZNF710Q8N1W2 664 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 SYNMO15061 1565 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 LDHCP07864 332 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 ZNF853P0CG23 659 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 GOLGA8FQ08AF8 430 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 GOLGA8DPQ0D2H9 430 aa19.63■□□□□ 0.73
SMPD4-202ENST00000409031 ENOX1Q8TC92 643 aaKnown RBP19.62■□□□□ 0.73
SMPD4-202ENST00000409031 PARP2Q9UGN5 583 aa19.62■□□□□ 0.73
SMPD4-202ENST00000409031 EYA2O00167 538 aa19.62■□□□□ 0.73
SMPD4-202ENST00000409031 HGSO14964 777 aaPredicted RBP19.62■□□□□ 0.73
SMPD4-202ENST00000409031 GPAA1O43292 621 aa19.62■□□□□ 0.73
SMPD4-202ENST00000409031 STAG1Q8WVM7 1258 aa19.62■□□□□ 0.73
SMPD4-202ENST00000409031 AMOTL2Q9Y2J4 779 aa19.62■□□□□ 0.73
SMPD4-202ENST00000409031 KLHL30Q0D2K2 578 aa19.62■□□□□ 0.73
SMPD4-202ENST00000409031 PEX26Q7Z412 305 aa19.62■□□□□ 0.73
SMPD4-202ENST00000409031 USP27XA6NNY8 438 aa19.62■□□□□ 0.73
SMPD4-202ENST00000409031 FLOT1O75955 427 aa19.62■□□□□ 0.73
SMPD4-202ENST00000409031 ZNF131P52739 623 aa19.62■□□□□ 0.73
SMPD4-202ENST00000409031 TRIM68Q6AZZ1 485 aa19.62■□□□□ 0.73
SMPD4-202ENST00000409031 NSUN7Q8NE18 718 aaKnown RBP19.62■□□□□ 0.73
SMPD4-202ENST00000409031 A0A087WWV3 80 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 CETN3O15182 167 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 LARGE1O95461 756 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 BAG3O95817 575 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 PDIA3P30101 505 aaKnown RBP19.61■□□□□ 0.73
SMPD4-202ENST00000409031 SLMAPQ14BN4 828 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 MUM1L1Q5H9M0 696 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 SFMBT2Q5VUG0 894 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 BICDL1Q6ZP65 573 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 ZNF365Q70YC5 407 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 RRAGAQ7L523 313 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 RNF168Q8IYW5 571 aaPredicted RBP19.61■□□□□ 0.73
SMPD4-202ENST00000409031 VPS52Q8N1B4 723 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 FAM184BQ9ULE4 1060 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 FANCAO15360 1455 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 HS2ST1Q7LGA3 356 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 USP37Q86T82 979 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 CCDC65Q8IXS2 484 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 UBL4BQ8N7F7 174 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 EAF2Q96CJ1 260 aaPredicted RBP19.61■□□□□ 0.73
SMPD4-202ENST00000409031 CDC5LQ99459 802 aaKnown RBP19.61■□□□□ 0.73
SMPD4-202ENST00000409031 TRIM6Q9C030 488 aaPredicted RBP19.61■□□□□ 0.73
SMPD4-202ENST00000409031 ZNF652Q9Y2D9 606 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 KDM5AP29375 1690 aaKnown RBP19.61■□□□□ 0.73
SMPD4-202ENST00000409031 ATP2A2P16615 1042 aaKnown RBP19.61■□□□□ 0.73
SMPD4-202ENST00000409031 MAP7Q14244 749 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 PHLDB3Q6NSJ2 640 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 SUCLG2Q96I99 432 aa19.61■□□□□ 0.73
SMPD4-202ENST00000409031 ENC1O14682 589 aa19.6■□□□□ 0.73
SMPD4-202ENST00000409031 TAF5LO75529 589 aa19.6■□□□□ 0.73
SMPD4-202ENST00000409031 GUCY2CP25092 1073 aa19.6■□□□□ 0.73
SMPD4-202ENST00000409031 GUCY2DQ02846 1103 aa19.6■□□□□ 0.73
SMPD4-202ENST00000409031 CCDC62Q6P9F0 684 aa19.6■□□□□ 0.73
SMPD4-202ENST00000409031 KLHDC4Q8TBB5 520 aa19.6■□□□□ 0.73
SMPD4-202ENST00000409031 CCDC169A6NNP5 214 aa19.6■□□□□ 0.73
SMPD4-202ENST00000409031 SMIM24O75264 130 aa19.6■□□□□ 0.73
SMPD4-202ENST00000409031 STAMQ92783 540 aa19.6■□□□□ 0.73
SMPD4-202ENST00000409031 RBL2Q08999 1139 aa19.6■□□□□ 0.73
SMPD4-202ENST00000409031 FNBP4Q8N3X1 1017 aaPredicted RBP19.6■□□□□ 0.73
SMPD4-202ENST00000409031 GSDMAQ96QA5 445 aa19.6■□□□□ 0.73
SMPD4-202ENST00000409031 KCNJ6P48051 423 aa19.6■□□□□ 0.73
SMPD4-202ENST00000409031 COPB1P53618 953 aaKnown RBP19.6■□□□□ 0.73
SMPD4-202ENST00000409031 TCP11Q8WWU5 503 aa19.6■□□□□ 0.73
SMPD4-202ENST00000409031 FAM207AQ9NSI2 230 aaPredicted RBP19.6■□□□□ 0.73
SMPD4-202ENST00000409031 EDC4Q6P2E9 1401 aaKnown RBP19.6■□□□□ 0.73
SMPD4-202ENST00000409031 SF3A3Q12874 501 aaKnown RBP eCLIP19.59■□□□□ 0.731e-6■■■■□ 22.7
SMPD4-202ENST00000409031 NNTQ13423 1086 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 PIK3AP1Q6ZUJ8 805 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 TRIM4Q9C037 500 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 V9GY48 417 aaPredicted RBP19.59■□□□□ 0.73
SMPD4-202ENST00000409031 ADCY9O60503 1353 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 TADA3O75528 432 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 STX2P32856 288 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 SLC39A6Q13433 755 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 ZSCAN29Q8IWY8 852 aaPredicted RBP19.59■□□□□ 0.73
SMPD4-202ENST00000409031 ZKSCAN3Q9BRR0 538 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 KCNJ14Q9UNX9 436 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 SBNO1A3KN83 1393 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 ZMYND10O75800 440 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 TSPY3P0CV98 308 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 TSPY8P0CW00 308 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 RNF14Q9UBS8 474 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 MAP3K19Q56UN5 1328 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 EMBQ6PCB8 327 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 ABCA5Q8WWZ7 1642 aa19.59■□□□□ 0.73
SMPD4-202ENST00000409031 LOC102724159A0A0B4J2E5 919 aa19.58■□□□□ 0.73
SMPD4-202ENST00000409031 PLCB3Q01970 1234 aa19.58■□□□□ 0.73
SMPD4-202ENST00000409031 PWP2Q15269 919 aaKnown RBP19.58■□□□□ 0.73
SMPD4-202ENST00000409031 CLIC6Q96NY7 704 aa19.58■□□□□ 0.73
SMPD4-202ENST00000409031 BLZF1Q9H2G9 400 aa19.58■□□□□ 0.73
SMPD4-202ENST00000409031 NOL3O60936 208 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms