RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 TMEM87BQ96K49 555 aa13.44□□□□□ -0.26
ITSN1-211ENST00000399355 GDAQ9Y2T3 454 aa13.44□□□□□ -0.26
ITSN1-211ENST00000399355 TSPY2A6NKD2 308 aa13.44□□□□□ -0.26
ITSN1-211ENST00000399355 ERVV-1B6SEH8 477 aa13.44□□□□□ -0.26
ITSN1-211ENST00000399355 SARM1Q6SZW1 724 aa13.44□□□□□ -0.26
ITSN1-211ENST00000399355 POLD4Q9HCU8 107 aa13.44□□□□□ -0.26
ITSN1-211ENST00000399355 CHD4Q14839 1912 aa13.44□□□□□ -0.26
ITSN1-211ENST00000399355 FAM196BA6NMK8 535 aa13.44□□□□□ -0.26
ITSN1-211ENST00000399355 URI1O94763 535 aaPredicted RBP13.44□□□□□ -0.26
ITSN1-211ENST00000399355 MYL5Q02045 173 aa13.44□□□□□ -0.26
ITSN1-211ENST00000399355 TROAPQ12815 778 aa13.44□□□□□ -0.26
ITSN1-211ENST00000399355 NSUN4Q96CB9 384 aaKnown RBP13.44□□□□□ -0.26
ITSN1-211ENST00000399355 NAT10Q9H0A0 1025 aaKnown RBP13.44□□□□□ -0.26
ITSN1-211ENST00000399355 DCP1AQ9NPI6 582 aaPredicted RBP13.44□□□□□ -0.26
ITSN1-211ENST00000399355 DISP2A7MBM2 1401 aa13.44□□□□□ -0.26
ITSN1-211ENST00000399355 MDM2Q00987 491 aaPredicted RBP13.43□□□□□ -0.26
ITSN1-211ENST00000399355 STAG1Q8WVM7 1258 aa13.43□□□□□ -0.26
ITSN1-211ENST00000399355 CCDC94Q9BW85 323 aaPredicted RBP13.43□□□□□ -0.26
ITSN1-211ENST00000399355 CUL4BQ13620 913 aa13.43□□□□□ -0.26
ITSN1-211ENST00000399355 VPS16Q9H269 839 aa13.43□□□□□ -0.26
ITSN1-211ENST00000399355 ZNF446Q9NWS9 450 aa13.43□□□□□ -0.26
ITSN1-211ENST00000399355 PCDHAC2Q9Y5I4 1007 aa13.43□□□□□ -0.26
ITSN1-211ENST00000399355 IL17RBQ9NRM6 502 aa13.43□□□□□ -0.26
ITSN1-211ENST00000399355 MYH6P13533 1939 aa13.43□□□□□ -0.26
ITSN1-211ENST00000399355 RIMBP2O15034 1052 aa13.42□□□□□ -0.26
ITSN1-211ENST00000399355 GYS2P54840 703 aa13.42□□□□□ -0.26
ITSN1-211ENST00000399355 UBA5Q9GZZ9 404 aa13.42□□□□□ -0.26
ITSN1-211ENST00000399355 TRIM10Q9UDY6 481 aa13.42□□□□□ -0.26
ITSN1-211ENST00000399355 LIFRP42702 1097 aa13.42□□□□□ -0.26
ITSN1-211ENST00000399355 RPS8P62241 208 aaKnown RBP13.42□□□□□ -0.26
ITSN1-211ENST00000399355 TFAP4Q01664 338 aa13.42□□□□□ -0.26
ITSN1-211ENST00000399355 AKAP17AQ02040 695 aaKnown RBP13.42□□□□□ -0.26
ITSN1-211ENST00000399355 FUT2Q10981 343 aa13.42□□□□□ -0.26
ITSN1-211ENST00000399355 SAFBQ15424 915 aaKnown RBP eCLIP13.42□□□□□ -0.26
ITSN1-211ENST00000399355 ARHGEF1Q92888 912 aaKnown RBP13.42□□□□□ -0.26
ITSN1-211ENST00000399355 DNAJC5Q9H3Z4 198 aa13.42□□□□□ -0.26
ITSN1-211ENST00000399355 ACTN4O43707 911 aaKnown RBP13.42□□□□□ -0.26
ITSN1-211ENST00000399355 TOP1P11387 765 aaKnown RBP13.42□□□□□ -0.26
ITSN1-211ENST00000399355 CAVIN4Q5BKX8 364 aa13.42□□□□□ -0.26
ITSN1-211ENST00000399355 MRPL44Q9H9J2 332 aaKnown RBP13.42□□□□□ -0.26
ITSN1-211ENST00000399355 CDKL5O76039 1030 aa13.42□□□□□ -0.26
ITSN1-211ENST00000399355 ZSCAN20P17040 1043 aaPredicted RBP13.42□□□□□ -0.26
ITSN1-211ENST00000399355 GTF2F1P35269 517 aaKnown RBP eCLIP13.42□□□□□ -0.266e-6■■□□□ 12.3
ITSN1-211ENST00000399355 MRPS25P82663 173 aaKnown RBP13.42□□□□□ -0.26
ITSN1-211ENST00000399355 SART3Q15020 963 aaKnown RBP13.42□□□□□ -0.26
ITSN1-211ENST00000399355 ESR2Q92731 530 aa13.42□□□□□ -0.26
ITSN1-211ENST00000399355 CARD6Q9BX69 1037 aa13.42□□□□□ -0.26
ITSN1-211ENST00000399355 TMEM60Q9H2L4 133 aa13.42□□□□□ -0.26
ITSN1-211ENST00000399355 TUBE1Q9UJT0 475 aa13.42□□□□□ -0.26
ITSN1-211ENST00000399355 CTNND2Q9UQB3 1225 aa13.42□□□□□ -0.26
ITSN1-211ENST00000399355 SMTNL1A8MU46 457 aa13.41□□□□□ -0.26
ITSN1-211ENST00000399355 CTIFO43310 598 aaKnown RBP13.41□□□□□ -0.26
ITSN1-211ENST00000399355 CACNB3P54284 484 aa13.41□□□□□ -0.26
ITSN1-211ENST00000399355 PICALMQ13492 652 aa13.41□□□□□ -0.26
ITSN1-211ENST00000399355 ZCCHC17Q9NP64 241 aaKnown RBP13.41□□□□□ -0.26
ITSN1-211ENST00000399355 PTPREP23469 700 aa13.41□□□□□ -0.26
ITSN1-211ENST00000399355 TERF1P54274 439 aa13.41□□□□□ -0.26
ITSN1-211ENST00000399355 PMS1P54277 932 aaKnown RBP13.41□□□□□ -0.26
ITSN1-211ENST00000399355 USP17L2Q6R6M4 530 aa13.41□□□□□ -0.26
ITSN1-211ENST00000399355 KRT23Q9C075 422 aa13.41□□□□□ -0.26
ITSN1-211ENST00000399355 NLRP5P59047 1200 aa13.41□□□□□ -0.26
ITSN1-211ENST00000399355 RCSD1Q6JBY9 416 aa13.41□□□□□ -0.26
ITSN1-211ENST00000399355 ANKRD7Q92527 254 aa13.41□□□□□ -0.26
ITSN1-211ENST00000399355 ZFP91Q96JP5 570 aaPredicted RBP13.41□□□□□ -0.26
ITSN1-211ENST00000399355 SETDB2Q96T68 719 aa13.41□□□□□ -0.26
ITSN1-211ENST00000399355 SCAF8Q9UPN6 1271 aaKnown RBP13.41□□□□□ -0.26
ITSN1-211ENST00000399355 CYTH3O43739 400 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 PPARDQ03181 441 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 INF2Q27J81 1249 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 SLC30A10Q6XR72 485 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.4□□□□□ -0.26
ITSN1-211ENST00000399355 KANSL2Q9H9L4 492 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 LRRC4BQ9NT99 713 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 MYH8P13535 1937 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 ERICH4A6NGS2 130 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 DEXIO95424 95 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 KLK7P49862 253 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 RBM6P78332 1123 aaKnown RBP13.4□□□□□ -0.26
ITSN1-211ENST00000399355 WWC2Q6AWC2 1192 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 HEATR3Q7Z4Q2 680 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 DZIP1Q86YF9 867 aaKnown RBP13.4□□□□□ -0.26
ITSN1-211ENST00000399355 FBXL16Q8N461 479 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 ACRBPQ8NEB7 543 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 SMARCE1Q969G3 411 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 CDC5LQ99459 802 aaKnown RBP13.4□□□□□ -0.26
ITSN1-211ENST00000399355 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 ROBO1Q9Y6N7 1651 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 FRMPD2Q68DX3 1309 aaPredicted RBP13.4□□□□□ -0.26
ITSN1-211ENST00000399355 HIBADHP31937 336 aaKnown RBP13.4□□□□□ -0.26
ITSN1-211ENST00000399355 TAB2Q9NYJ8 693 aa13.4□□□□□ -0.26
ITSN1-211ENST00000399355 FAM196AQ6ZSG2 479 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 TMEM139Q8IV31 216 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 RASSF8Q8NHQ8 419 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 DDX60Q8IY21 1712 aaKnown RBP13.39□□□□□ -0.27
ITSN1-211ENST00000399355 XDHP47989 1333 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 ATP2B2Q01814 1243 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 FKBP15Q5T1M5 1219 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 TRERF1Q96PN7 1200 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 SUGCTQ9HAC7 445 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 PUF60Q9UHX1 559 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms