RNA–Protein interactions for RNA: ENST00000394839.6

PRKACB-208, Transcript of protein kinase cAMP-activated catalytic subunit beta, human

TSL 2 BASIC

Gene PRKACB, Length 4,200 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKACB-208	ENST00000394839	IDH1	O75874	414 aa	Known RBP	5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	KCTD2	Q14681	263 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	GRIK5	Q16478	980 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	GPR142	Q7Z601	462 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	TGFBRAP1	Q8WUH2	860 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	NSUN4	Q96CB9	384 aa	Known RBP	5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	KAZALD1	Q96I82	304 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	PRDM5	Q9NQX1	630 aa	Predicted RBP	5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	HMG20B	Q9P0W2	317 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	AK9	Q5TCS8	1911 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	MROH7	Q68CQ1	1323 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	DDTL	A6NHG4	134 aa	Predicted RBP	5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	ZEB2	O60315	1214 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	RARB	P10826	455 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	MAPKAPK5	Q8IW41	473 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	ZNF512B	Q96KM6	892 aa	Predicted RBP	5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	GAS2L1	Q99501	681 aa	Predicted RBP	5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	TANGO6	Q9C0B7	1094 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	KIAA1683	Q9H0B3	1180 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	AATF	Q9NY61	560 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	LAMB1	P07942	1786 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	DCDC2C	A8MYV0	355 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	SURF6	O75683	361 aa	Known RBP	5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	SLC3A2	P08195	630 aa	Known RBP	5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	RAB3GAP1	Q15042	981 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	ABRA	Q8N0Z2	381 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	GOPC	Q9HD26	462 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	ATP11B	Q9Y2G3	1177 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	PITPNM1	O00562	1244 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	PTPRE	P23469	700 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	TIMM10	P62072	90 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	MOGS	Q13724	837 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	OLFML2B	Q68BL8	750 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	FRAT1	Q92837	279 aa	Predicted RBP	5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	SENP6	Q9GZR1	1112 aa	Predicted RBP	5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	PNMA2	Q9UL42	364 aa		5.17	□□□□□ -1.58
PRKACB-208	ENST00000394839	MAGEB6P1	A0A0J9YX57	407 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839		B4DLN1	442 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	IFIT2	P09913	472 aa	Known RBP	5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	FCER1A	P12319	257 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	ADORA1	P30542	326 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	MRPL12	P52815	198 aa	Known RBP	5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	RTP1	P59025	263 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	COG2	Q14746	738 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	TREML2	Q5T2D2	321 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	TMEM179	Q6ZVK1	233 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	CLASRP	Q8N2M8	674 aa	Known RBP	5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	NUP133	Q8WUM0	1156 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	P2RX7	Q99572	595 aa	Known RBP	5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	RFX7	Q2KHR2	1363 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	SMAD3	P84022	425 aa	Known RBP	5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	PDAP1	Q13442	181 aa	Known RBP	5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	PLS1	Q14651	629 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	MSL3	Q8N5Y2	521 aa	Known RBP	5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	FBXO40	Q9UH90	709 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	PA2G4	Q9UQ80	394 aa	Known RBP	5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	TACC3	Q9Y6A5	838 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	FLT1	P17948	1338 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	OTOF	Q9HC10	1997 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	CCER2	I3L3R5	266 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	GH2	P01242	217 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	HOXC6	P09630	235 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	FDX1	P10109	184 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	RAG1	P15918	1043 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	RHBDL3	P58872	404 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	PPIG	Q13427	754 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	RAB30	Q15771	203 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	AAK1	Q2M2I8	961 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	BRDT	Q58F21	947 aa	Predicted RBP	5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	TNNI3K	Q59H18	835 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	MAP3K21	Q5TCX8	1036 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	TRIB2	Q92519	343 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	MSRA	Q9UJ68	235 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	FPGT-TNNI3K	V9GXZ4	949 aa		5.16	□□□□□ -1.58
PRKACB-208	ENST00000394839	GTPBP6	O43824	516 aa	Predicted RBP	5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	ZBED4	O75132	1171 aa		5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	FOSL2	P15408	326 aa		5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	SYN1	P17600	705 aa		5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	LBX2	Q6XYB7	198 aa		5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	NCAPG2	Q86XI2	1143 aa		5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	PCSK9	Q8NBP7	692 aa	Known RBP	5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	DOCK2	Q92608	1830 aa		5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	WDR46	O15213	610 aa	Known RBP	5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	SEPT4	O43236	478 aa		5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	GDF11	O95390	407 aa		5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	VTI1A	Q96AJ9	217 aa		5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	RNPC3	Q96LT9	517 aa	Known RBP	5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	MEIS3	Q99687	375 aa		5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	PRO3102	Q9H379	93 aa		5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	RPAP3	Q9H6T3	665 aa	Predicted RBP	5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	DDX4	Q9NQI0	724 aa	Known RBP	5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	SAP30BP	Q9UHR5	308 aa	Known RBP	5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	GJD2	Q9UKL4	321 aa		5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	ISY1	Q9ULR0	285 aa	Known RBP	5.15	□□□□□ -1.58
PRKACB-208	ENST00000394839	APBB1	O00213	710 aa		5.15	□□□□□ -1.59
PRKACB-208	ENST00000394839	CACNB2	Q08289	660 aa	Predicted RBP	5.15	□□□□□ -1.59
PRKACB-208	ENST00000394839	PSRC1	Q6PGN9	363 aa	Predicted RBP	5.15	□□□□□ -1.59
PRKACB-208	ENST00000394839	CATSPERG	Q6ZRH7	1159 aa		5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms