RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ICE2Q659A1 982 aa17.86■□□□□ 0.45
SHANK1-204ENST00000391814 SPDYE3A6NKU9 549 aa17.86■□□□□ 0.45
SHANK1-204ENST00000391814 STMN1P16949 149 aa17.86■□□□□ 0.45
SHANK1-204ENST00000391814 SLC35F6Q8N357 371 aa17.86■□□□□ 0.45
SHANK1-204ENST00000391814 AMFRQ9UKV5 643 aa17.86■□□□□ 0.45
SHANK1-204ENST00000391814 GUCY2DQ02846 1103 aa17.86■□□□□ 0.45
SHANK1-204ENST00000391814 FBXO38Q6PIJ6 1188 aa17.86■□□□□ 0.45
SHANK1-204ENST00000391814 NUCKS1Q9H1E3 243 aaKnown RBP17.86■□□□□ 0.45
SHANK1-204ENST00000391814 SGSM2O43147 1006 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 PPP2R5DQ14738 602 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 FCHSD1Q86WN1 690 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 MYL10Q9BUA6 226 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 HOMER3Q9NSC5 361 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 MX2P20592 715 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 MAGEA9P43362 315 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 CAPN12Q6ZSI9 719 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 AFAP1L2Q8N4X5 818 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 NLRC4Q9NPP4 1024 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 KCNJ14Q9UNX9 436 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 GNA11P29992 359 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 WDR44Q5JSH3 913 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 KRT12Q99456 494 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 PARD6BQ9BYG5 372 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 ZBTB17Q13105 803 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.85■□□□□ 0.45
SHANK1-204ENST00000391814 CCDC152Q4G0S7 254 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 EXOC4Q96A65 974 aa17.85■□□□□ 0.45
SHANK1-204ENST00000391814 MAP3K21Q5TCX8 1036 aa17.84■□□□□ 0.45
SHANK1-204ENST00000391814 LOC102724159A0A0B4J2E5 919 aa17.84■□□□□ 0.45
SHANK1-204ENST00000391814 MYO1CO00159 1063 aa17.84■□□□□ 0.45
SHANK1-204ENST00000391814 PPP2R5CQ13362 524 aa17.84■□□□□ 0.45
SHANK1-204ENST00000391814 PWP2Q15269 919 aaKnown RBP17.84■□□□□ 0.45
SHANK1-204ENST00000391814 U2AF1L4Q8WU68 220 aaKnown RBP17.84■□□□□ 0.45
SHANK1-204ENST00000391814 FANCLQ9NW38 375 aa17.84■□□□□ 0.45
SHANK1-204ENST00000391814 DIS3L2Q8IYB7 885 aaKnown RBP17.84■□□□□ 0.45
SHANK1-204ENST00000391814 TSC22D3Q99576 134 aa17.84■□□□□ 0.45
SHANK1-204ENST00000391814 SCOCQ9UIL1 159 aa17.84■□□□□ 0.45
SHANK1-204ENST00000391814 C6orf229H3BNL8 230 aa17.84■□□□□ 0.45
SHANK1-204ENST00000391814 GUCY2CP25092 1073 aa17.84■□□□□ 0.45
SHANK1-204ENST00000391814 IFNAR2P48551 515 aa17.84■□□□□ 0.45
SHANK1-204ENST00000391814 NELFCDQ8IXH7 590 aa17.84■□□□□ 0.45
SHANK1-204ENST00000391814 MRPL46Q9H2W6 279 aaKnown RBP17.84■□□□□ 0.45
SHANK1-204ENST00000391814 VCX3AQ9NNX9 186 aa17.84■□□□□ 0.45
SHANK1-204ENST00000391814 BCAP29Q9UHQ4 241 aa17.84■□□□□ 0.45
SHANK1-204ENST00000391814 PIK3C2GO75747 1445 aa17.84■□□□□ 0.45
SHANK1-204ENST00000391814 TXKP42681 527 aa17.83■□□□□ 0.45
SHANK1-204ENST00000391814 NXNQ6DKJ4 435 aa17.83■□□□□ 0.45
SHANK1-204ENST00000391814 EIF2AK4Q9P2K8 1649 aaKnown RBP17.83■□□□□ 0.45
SHANK1-204ENST00000391814 CDC23Q9UJX2 597 aa17.83■□□□□ 0.45
SHANK1-204ENST00000391814 COBLO75128 1261 aa17.83■□□□□ 0.44
SHANK1-204ENST00000391814 FLOT1O75955 427 aa17.83■□□□□ 0.44
SHANK1-204ENST00000391814 SUN1O94901 812 aa17.83■□□□□ 0.44
SHANK1-204ENST00000391814 GSPT1P15170 499 aaKnown RBP17.83■□□□□ 0.44
SHANK1-204ENST00000391814 ADALQ6DHV7 355 aa17.83■□□□□ 0.44
SHANK1-204ENST00000391814 AOX1Q06278 1338 aa17.83■□□□□ 0.44
SHANK1-204ENST00000391814 PROCA1Q8NCQ7 364 aaPredicted RBP17.83■□□□□ 0.44
SHANK1-204ENST00000391814 NESP48681 1621 aa17.83■□□□□ 0.44
SHANK1-204ENST00000391814 ANLNQ9NQW6 1124 aa17.83■□□□□ 0.44
SHANK1-204ENST00000391814 TRIM35Q9UPQ4 493 aa17.83■□□□□ 0.44
SHANK1-204ENST00000391814 SLC39A6Q13433 755 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 KRT40Q6A162 431 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 PALM2Q8IXS6 379 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 CCDC89Q8N998 374 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 P3H4Q92791 437 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 VTI1AQ96AJ9 217 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 CASC4Q6P4E1 433 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 FBXO18Q8NFZ0 1043 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 UIMC1Q96RL1 719 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 MBD4O95243 580 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 PARP1P09874 1014 aaKnown RBP17.82■□□□□ 0.44
SHANK1-204ENST00000391814 NDUFA8P51970 172 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 LGSNQ5TDP6 509 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 G2E3Q7L622 706 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 HVCN1Q96D96 273 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 THEGQ9P2T0 379 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 F8W031 263 aaPredicted RBP17.82■□□□□ 0.44
SHANK1-204ENST00000391814 BIRC3Q13489 604 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 OR8K1Q8NGG5 319 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 MCM9Q9NXL9 1143 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 V9GY48 417 aaPredicted RBP17.82■□□□□ 0.44
SHANK1-204ENST00000391814 THAP12O43422 761 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 CHMP2AO43633 222 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 MAN1A1P33908 653 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 APBA1Q02410 837 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 MMS22LQ6ZRQ5 1243 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 PPP4R1Q8TF05 950 aa17.82■□□□□ 0.44
SHANK1-204ENST00000391814 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.82■□□□□ 0.44
SHANK1-204ENST00000391814 ERBB4Q15303 1308 aa17.81■□□□□ 0.44
SHANK1-204ENST00000391814 VPS41P49754 854 aa17.81■□□□□ 0.44
SHANK1-204ENST00000391814 ZKSCAN8Q15776 578 aaPredicted RBP17.81■□□□□ 0.44
SHANK1-204ENST00000391814 MTHFSDQ2M296 383 aaKnown RBP17.81■□□□□ 0.44
SHANK1-204ENST00000391814 PKD2L1Q9P0L9 805 aa17.81■□□□□ 0.44
SHANK1-204ENST00000391814 ADCY8P40145 1251 aa17.81■□□□□ 0.44
SHANK1-204ENST00000391814 CTDSPL2Q05D32 466 aa17.81■□□□□ 0.44
SHANK1-204ENST00000391814 NBPF6Q5VWK0 638 aa17.81■□□□□ 0.44
SHANK1-204ENST00000391814 LRRC8CQ8TDW0 803 aa17.81■□□□□ 0.44
SHANK1-204ENST00000391814 NBPF4Q96M43 638 aa17.81■□□□□ 0.44
SHANK1-204ENST00000391814 INTS9Q9NV88 658 aaKnown RBP17.81■□□□□ 0.44
SHANK1-204ENST00000391814 RNF123Q5XPI4 1314 aa17.81■□□□□ 0.44
SHANK1-204ENST00000391814 NCBP1Q09161 790 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms