RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 A0A1W2PRG0 241 aa13.87□□□□□ -0.19
DEPDC4-202ENST00000378244 MANSC4A6NHS7 340 aaPredicted RBP13.87□□□□□ -0.19
DEPDC4-202ENST00000378244 KDM4AO75164 1064 aa13.87□□□□□ -0.19
DEPDC4-202ENST00000378244 RNF41Q9H4P4 317 aaPredicted RBP13.87□□□□□ -0.19
DEPDC4-202ENST00000378244 TSKSQ9UJT2 592 aa13.87□□□□□ -0.19
DEPDC4-202ENST00000378244 USP17L10C9JJH3 530 aa13.87□□□□□ -0.19
DEPDC4-202ENST00000378244 IGF2BP3O00425 579 aaKnown RBP eCLIP13.87□□□□□ -0.19
DEPDC4-202ENST00000378244 TRPA1O75762 1119 aa13.87□□□□□ -0.19
DEPDC4-202ENST00000378244 EEF2P13639 858 aaKnown RBP13.87□□□□□ -0.19
DEPDC4-202ENST00000378244 STAG1Q8WVM7 1258 aa13.87□□□□□ -0.19
DEPDC4-202ENST00000378244 CEP95Q96GE4 821 aa13.87□□□□□ -0.19
DEPDC4-202ENST00000378244 STX8Q9UNK0 236 aa13.87□□□□□ -0.19
DEPDC4-202ENST00000378244 KCNH4Q9UQ05 1017 aa13.87□□□□□ -0.19
DEPDC4-202ENST00000378244 REC8O95072 547 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 CETPP11597 493 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 BACE1P56817 501 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 SREBF2Q12772 1141 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 CREB3L3Q68CJ9 461 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 SIAH1Q8IUQ4 282 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 SPICE1Q8N0Z3 855 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 FAM43AQ8N2R8 423 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 BEGAINQ9BUH8 593 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 KANSL2Q9H9L4 492 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 CXCL11O14625 94 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 SLC27A2O14975 620 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 ORC4O43929 436 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 NECTIN1Q15223 517 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 STOX1Q6ZVD7 989 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 CHST3Q7LGC8 479 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 CLIP2Q9UDT6 1046 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 MTMR7Q9Y216 660 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 DOCK1Q14185 1865 aa13.86□□□□□ -0.19
DEPDC4-202ENST00000378244 E7EWF7 191 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 SEC24BO95487 1268 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 FGRP09769 529 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 MAP2K1Q02750 393 aaPredicted RBP13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 TRDNQ13061 729 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 IFNL1Q8IU54 200 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 NEDD1Q8NHV4 660 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 ESR2Q92731 530 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 WDR18Q9BV38 432 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 IL17RBQ9NRM6 502 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 ZSWIM5Q9P217 1185 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 LAMB1P07942 1786 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 A0A0G2JLL6 359 aaPredicted RBP13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 BTBD19C9JJ37 291 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 TM4SF4P48230 202 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 COL9A3Q14050 684 aaPredicted RBP13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 TREML2Q5T2D2 321 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 PRRT2Q7Z6L0 340 aaPredicted RBP13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 RASEFQ8IZ41 740 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 GINM1Q9NU53 330 aa13.85□□□□□ -0.19
DEPDC4-202ENST00000378244 INHBEP58166 350 aa13.84□□□□□ -0.19
DEPDC4-202ENST00000378244 RALYLQ86SE5 291 aaKnown RBP13.84□□□□□ -0.19
DEPDC4-202ENST00000378244 LRRC47Q8N1G4 583 aaKnown RBP13.84□□□□□ -0.19
DEPDC4-202ENST00000378244 ARHGEF10LQ9HCE6 1279 aa13.84□□□□□ -0.19
DEPDC4-202ENST00000378244 EMILIN3Q9NT22 766 aa13.84□□□□□ -0.19
DEPDC4-202ENST00000378244 MTMR4Q9NYA4 1195 aa13.84□□□□□ -0.19
DEPDC4-202ENST00000378244 TMOD4Q9NZQ9 345 aa13.84□□□□□ -0.19
DEPDC4-202ENST00000378244 ATAD5Q96QE3 1844 aa13.84□□□□□ -0.19
DEPDC4-202ENST00000378244 MOGSQ13724 837 aa13.84□□□□□ -0.19
DEPDC4-202ENST00000378244 RNF20Q5VTR2 975 aa13.84□□□□□ -0.19
DEPDC4-202ENST00000378244 SAMD1Q6SPF0 538 aaPredicted RBP13.84□□□□□ -0.19
DEPDC4-202ENST00000378244 JMYQ8N9B5 988 aa13.84□□□□□ -0.19
DEPDC4-202ENST00000378244 RNF186Q9NXI6 227 aa13.84□□□□□ -0.19
DEPDC4-202ENST00000378244 MYH8P13535 1937 aa13.83□□□□□ -0.2
DEPDC4-202ENST00000378244 PDHXO00330 501 aa13.83□□□□□ -0.2
DEPDC4-202ENST00000378244 TBC1D8O95759 1140 aa13.83□□□□□ -0.2
DEPDC4-202ENST00000378244 CYP2C8P10632 490 aa13.83□□□□□ -0.2
DEPDC4-202ENST00000378244 KIAA1755Q5JYT7 1200 aa13.83□□□□□ -0.2
DEPDC4-202ENST00000378244 FASTKD5Q7L8L6 764 aaKnown RBP13.83□□□□□ -0.2
DEPDC4-202ENST00000378244 KRT23Q9C075 422 aa13.83□□□□□ -0.2
DEPDC4-202ENST00000378244 CNNM2Q9H8M5 875 aa13.83□□□□□ -0.2
DEPDC4-202ENST00000378244 WBP1LQ9NX94 342 aa13.83□□□□□ -0.2
DEPDC4-202ENST00000378244 ECM2O94769 699 aaPredicted RBP13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 TTLL1O95922 423 aa13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 PCP11498 1178 aaKnown RBP13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 C8orf34Q49A92 452 aa13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 CYB5R4Q7L1T6 521 aa13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 NCOA7Q8NI08 942 aa13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 KIAA1683Q9H0B3 1180 aa13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 ISY1Q9ULR0 285 aaKnown RBP13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 TMX2Q9Y320 296 aa13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 IGKV6D-41A0A0C4DH26 115 aa13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 TESPA1A2RU30 521 aaPredicted RBP13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 C19orf81C9J6K1 198 aa13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 ZKSCAN1P17029 563 aaPredicted RBP13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 TAF1CQ15572 869 aaPredicted RBP13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 ADCK5Q3MIX3 580 aa13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 OTUD7BQ6GQQ9 843 aa13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 GPAT2Q6NUI2 795 aa13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 IQCA1Q86XH1 822 aa13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 USP26Q9BXU7 913 aa13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 TBC1D2Q9BYX2 928 aa13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 R3HDMLQ9H3Y0 253 aa13.82□□□□□ -0.2
DEPDC4-202ENST00000378244 HSPA1AP0DMV8 641 aaKnown RBP13.81□□□□□ -0.2
DEPDC4-202ENST00000378244 HSPA1BP0DMV9 641 aaKnown RBP13.81□□□□□ -0.2
DEPDC4-202ENST00000378244 VCAM1P19320 739 aa13.81□□□□□ -0.2
DEPDC4-202ENST00000378244 RASGRP2Q7LDG7 609 aa13.81□□□□□ -0.2
DEPDC4-202ENST00000378244 NUP88Q99567 741 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms