RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SLF1Q9BQI6 1058 aa18.71■□□□□ 0.58
TRIM39-201ENST00000376656 STRN4Q9NRL3 753 aa18.71■□□□□ 0.58
TRIM39-201ENST00000376656 FAM205CA6NFA0 338 aa18.7■□□□□ 0.58
TRIM39-201ENST00000376656 PPP1R3GB7ZBB8 358 aa18.7■□□□□ 0.58
TRIM39-201ENST00000376656 CCDC51Q96ER9 411 aa18.7■□□□□ 0.58
TRIM39-201ENST00000376656 PAGE5Q96GU1 130 aa18.7■□□□□ 0.58
TRIM39-201ENST00000376656 ZKSCAN3Q9BRR0 538 aa18.7■□□□□ 0.58
TRIM39-201ENST00000376656 MKRN1Q9UHC7 482 aaKnown RBP18.7■□□□□ 0.58
TRIM39-201ENST00000376656 TMTC1Q8IUR5 882 aa18.7■□□□□ 0.58
TRIM39-201ENST00000376656 ABHD10Q9NUJ1 306 aa18.7■□□□□ 0.58
TRIM39-201ENST00000376656 ATRNO75882 1429 aa18.7■□□□□ 0.58
TRIM39-201ENST00000376656 MST1RQ04912 1400 aa18.7■□□□□ 0.58
TRIM39-201ENST00000376656 RNF40O75150 1001 aa18.69■□□□□ 0.58
TRIM39-201ENST00000376656 TRIM22Q8IYM9 498 aa18.69■□□□□ 0.58
TRIM39-201ENST00000376656 FAM89AQ96GI7 184 aa18.69■□□□□ 0.58
TRIM39-201ENST00000376656 MED4Q9NPJ6 270 aa18.69■□□□□ 0.58
TRIM39-201ENST00000376656 TRIM10Q9UDY6 481 aa18.69■□□□□ 0.58
TRIM39-201ENST00000376656 RIC1Q4ADV7 1423 aa18.69■□□□□ 0.58
TRIM39-201ENST00000376656 METTL24Q5JXM2 366 aa18.69■□□□□ 0.58
TRIM39-201ENST00000376656 WDR93Q6P2C0 686 aa18.69■□□□□ 0.58
TRIM39-201ENST00000376656 EPB41L4AQ9HCS5 686 aaPredicted RBP18.69■□□□□ 0.58
TRIM39-201ENST00000376656 CTNND2Q9UQB3 1225 aa18.69■□□□□ 0.58
TRIM39-201ENST00000376656 TRPM3Q9HCF6 1732 aaPredicted RBP18.69■□□□□ 0.58
TRIM39-201ENST00000376656 SYF2O95926 243 aaKnown RBP18.69■□□□□ 0.58
TRIM39-201ENST00000376656 PDE6AP16499 860 aa18.69■□□□□ 0.58
TRIM39-201ENST00000376656 AKAP17AQ02040 695 aaKnown RBP18.69■□□□□ 0.58
TRIM39-201ENST00000376656 UBE3CQ15386 1083 aa18.69■□□□□ 0.58
TRIM39-201ENST00000376656 RTN1Q16799 776 aa18.69■□□□□ 0.58
TRIM39-201ENST00000376656 SH3RF1Q7Z6J0 888 aa18.69■□□□□ 0.58
TRIM39-201ENST00000376656 STRBPQ96SI9 672 aaKnown RBP18.69■□□□□ 0.58
TRIM39-201ENST00000376656 FBXO3Q9UK99 471 aa18.69■□□□□ 0.58
TRIM39-201ENST00000376656 KRT31Q15323 416 aa18.68■□□□□ 0.58
TRIM39-201ENST00000376656 TTC31Q49AM3 519 aaPredicted RBP18.68■□□□□ 0.58
TRIM39-201ENST00000376656 STAMQ92783 540 aa18.68■□□□□ 0.58
TRIM39-201ENST00000376656 ACBD3Q9H3P7 528 aa18.68■□□□□ 0.58
TRIM39-201ENST00000376656 CEP131Q9UPN4 1083 aa18.68■□□□□ 0.58
TRIM39-201ENST00000376656 ITIH6Q6UXX5 1313 aa18.68■□□□□ 0.58
TRIM39-201ENST00000376656 IFIT5Q13325 482 aaKnown RBP18.68■□□□□ 0.58
TRIM39-201ENST00000376656 CT47A1Q5JQC4 288 aaPredicted RBP18.68■□□□□ 0.58
TRIM39-201ENST00000376656 VPS16Q9H269 839 aa18.68■□□□□ 0.58
TRIM39-201ENST00000376656 WDR17Q8IZU2 1322 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 SEMA3EO15041 775 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 CYP26C1Q6V0L0 522 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 NUP88Q99567 741 aaPredicted RBP18.67■□□□□ 0.58
TRIM39-201ENST00000376656 ISCA1Q9BUE6 129 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 AATFQ9NY61 560 aaKnown RBP eCLIP18.67■□□□□ 0.58
TRIM39-201ENST00000376656 MYO1AQ9UBC5 1043 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 HDAC6Q9UBN7 1215 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 TBC1D2BQ9UPU7 963 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 N4BP3O15049 544 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 CORO7P57737 925 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 RRP12Q5JTH9 1297 aaKnown RBP18.67■□□□□ 0.58
TRIM39-201ENST00000376656 CRACR2BQ8N4Y2 399 aaPredicted RBP18.67■□□□□ 0.58
TRIM39-201ENST00000376656 AIDAQ96BJ3 306 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 GUCA1BQ9UMX6 200 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 ENC1O14682 589 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 TUBBP07437 444 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 CTR9Q6PD62 1173 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 CCDC148Q8NFR7 591 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 SYMPKQ92797 1274 aaKnown RBP18.67■□□□□ 0.58
TRIM39-201ENST00000376656 CHP1Q99653 195 aa18.67■□□□□ 0.58
TRIM39-201ENST00000376656 REXO2Q9Y3B8 237 aaKnown RBP18.67■□□□□ 0.58
TRIM39-201ENST00000376656 TCRBV5S4A2TA0A5A2 114 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 PRPF6O94906 941 aaKnown RBP18.66■□□□□ 0.58
TRIM39-201ENST00000376656 DEXIO95424 95 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 ICE2Q659A1 982 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 IFNL3Q8IZI9 196 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 SYNE4Q8N205 404 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 AFAP1L1Q8TED9 768 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 RIN2Q8WYP3 895 aaPredicted RBP18.66■□□□□ 0.58
TRIM39-201ENST00000376656 SHISA4Q96DD7 197 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 ZNF330Q9Y3S2 320 aaPredicted RBP18.66■□□□□ 0.58
TRIM39-201ENST00000376656 LRP6O75581 1613 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 EARS2Q5JPH6 523 aaKnown RBP18.66■□□□□ 0.58
TRIM39-201ENST00000376656 TAB2Q9NYJ8 693 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 RIPOR2Q9Y4F9 1068 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 FER1L4A9Z1Z3 1794 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 AARSP49588 968 aaKnown RBP eCLIP18.66■□□□□ 0.58
TRIM39-201ENST00000376656 USP14P54578 494 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 TTF1Q15361 905 aaPredicted RBP18.66■□□□□ 0.58
TRIM39-201ENST00000376656 SKIDA1Q1XH10 827 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 GDAP1L1Q96MZ0 367 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 GSDMAQ96QA5 445 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 NAPBQ9H115 298 aa18.66■□□□□ 0.58
TRIM39-201ENST00000376656 PARP4Q9UKK3 1724 aaKnown RBP18.65■□□□□ 0.58
TRIM39-201ENST00000376656 KRT9P35527 623 aa18.65■□□□□ 0.58
TRIM39-201ENST00000376656 TRAPPC11Q7Z392 1133 aa18.65■□□□□ 0.58
TRIM39-201ENST00000376656 TOMM22Q9NS69 142 aa18.65■□□□□ 0.58
TRIM39-201ENST00000376656 HPCAL4Q9UM19 191 aa18.65■□□□□ 0.58
TRIM39-201ENST00000376656 TFR2Q9UP52 801 aa18.65■□□□□ 0.58
TRIM39-201ENST00000376656 WNT7AO00755 349 aa18.65■□□□□ 0.58
TRIM39-201ENST00000376656 CHRNA2Q15822 529 aa18.65■□□□□ 0.58
TRIM39-201ENST00000376656 LDHAL6AQ6ZMR3 332 aa18.65■□□□□ 0.58
TRIM39-201ENST00000376656 NUP133Q8WUM0 1156 aa18.65■□□□□ 0.58
TRIM39-201ENST00000376656 MMS19Q96T76 1030 aa18.65■□□□□ 0.58
TRIM39-201ENST00000376656 VIPAS39Q9H9C1 493 aa18.65■□□□□ 0.58
TRIM39-201ENST00000376656 LIMA1Q9UHB6 759 aaKnown RBP18.65■□□□□ 0.58
TRIM39-201ENST00000376656 TRIM75PA6NK02 468 aa18.64■□□□□ 0.58
TRIM39-201ENST00000376656 PPFIA4O75335 1185 aa18.64■□□□□ 0.58
TRIM39-201ENST00000376656 PHKA1P46020 1223 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms