RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 U2AF2P26368 475 aaKnown RBP eCLIP19.11■□□□□ 0.652e-7■■□□□ 11.9
MCF2L-203ENST00000375604 CNGA4Q8IV77 575 aa19.11■□□□□ 0.65
MCF2L-203ENST00000375604 TAB3Q8N5C8 712 aaPredicted RBP19.11■□□□□ 0.65
MCF2L-203ENST00000375604 FAM207AQ9NSI2 230 aaPredicted RBP19.11■□□□□ 0.65
MCF2L-203ENST00000375604 PCDHB13Q9Y5F0 798 aa19.11■□□□□ 0.65
MCF2L-203ENST00000375604 ATP10AO60312 1499 aa19.11■□□□□ 0.65
MCF2L-203ENST00000375604 CD19P15391 556 aa19.1■□□□□ 0.65
MCF2L-203ENST00000375604 TNNI1P19237 187 aa19.1■□□□□ 0.65
MCF2L-203ENST00000375604 GPR101Q96P66 508 aaPredicted RBP19.1■□□□□ 0.65
MCF2L-203ENST00000375604 FAM204AQ9H8W3 233 aa19.1■□□□□ 0.65
MCF2L-203ENST00000375604 NLRC4Q9NPP4 1024 aa19.1■□□□□ 0.65
MCF2L-203ENST00000375604 TYW1BQ6NUM6 668 aa19.1■□□□□ 0.65
MCF2L-203ENST00000375604 MICALL1Q8N3F8 863 aa19.1■□□□□ 0.65
MCF2L-203ENST00000375604 TRPC6Q9Y210 931 aa19.1■□□□□ 0.65
MCF2L-203ENST00000375604 CPLX4Q7Z7G2 160 aa19.1■□□□□ 0.65
MCF2L-203ENST00000375604 TLR7Q9NYK1 1049 aaKnown RBP19.1■□□□□ 0.65
MCF2L-203ENST00000375604 MTUS1Q9ULD2 1270 aa19.1■□□□□ 0.65
MCF2L-203ENST00000375604 H7C1D1 291 aa19.1■□□□□ 0.65
MCF2L-203ENST00000375604 CALCOCO2Q13137 446 aa19.1■□□□□ 0.65
MCF2L-203ENST00000375604 BSPRYQ5W0U4 402 aa19.1■□□□□ 0.65
MCF2L-203ENST00000375604 PTPN21Q16825 1174 aa19.09■□□□□ 0.65
MCF2L-203ENST00000375604 TEKT1Q969V4 418 aa19.09■□□□□ 0.65
MCF2L-203ENST00000375604 ZSCAN10Q96SZ4 725 aaPredicted RBP19.09■□□□□ 0.65
MCF2L-203ENST00000375604 HINFPQ9BQA5 517 aa19.09■□□□□ 0.65
MCF2L-203ENST00000375604 ADKP55263 362 aaKnown RBP19.09■□□□□ 0.65
MCF2L-203ENST00000375604 SNX16P57768 344 aa19.09■□□□□ 0.65
MCF2L-203ENST00000375604 CTTNBP2NLQ9P2B4 639 aa19.09■□□□□ 0.65
MCF2L-203ENST00000375604 ZMYM4Q5VZL5 1548 aa19.09■□□□□ 0.65
MCF2L-203ENST00000375604 MAP7D1Q3KQU3 841 aa19.09■□□□□ 0.65
MCF2L-203ENST00000375604 CYP26C1Q6V0L0 522 aa19.09■□□□□ 0.65
MCF2L-203ENST00000375604 DDX12PQ92771 950 aa19.09■□□□□ 0.65
MCF2L-203ENST00000375604 ATXN8OSP0DMR3 200 aa19.09■□□□□ 0.65
MCF2L-203ENST00000375604 EEF2KMTQ96G04 330 aa19.09■□□□□ 0.65
MCF2L-203ENST00000375604 PGBD1Q96JS3 809 aa19.09■□□□□ 0.65
MCF2L-203ENST00000375604 MNAT1P51948 309 aa19.09■□□□□ 0.65
MCF2L-203ENST00000375604 MLXIPQ9HAP2 919 aa19.09■□□□□ 0.65
MCF2L-203ENST00000375604 PBRM1Q86U86 1689 aa19.09■□□□□ 0.65
MCF2L-203ENST00000375604 CUTAO60888 179 aa19.08■□□□□ 0.65
MCF2L-203ENST00000375604 PDE6BP35913 854 aa19.08■□□□□ 0.65
MCF2L-203ENST00000375604 QTRT2Q9H974 415 aaKnown RBP19.08■□□□□ 0.65
MCF2L-203ENST00000375604 TSPOAP1O95153 1857 aa19.08■□□□□ 0.65
MCF2L-203ENST00000375604 TCOF1Q13428 1488 aaKnown RBP19.08■□□□□ 0.65
MCF2L-203ENST00000375604 SLC8A3P57103 927 aa19.08■□□□□ 0.65
MCF2L-203ENST00000375604 EVCP57679 992 aa19.08■□□□□ 0.65
MCF2L-203ENST00000375604 NLRP12P59046 1061 aa19.08■□□□□ 0.65
MCF2L-203ENST00000375604 INF2Q27J81 1249 aa19.08■□□□□ 0.65
MCF2L-203ENST00000375604 MIER3Q7Z3K6 550 aa19.08■□□□□ 0.65
MCF2L-203ENST00000375604 IFNL3Q8IZI9 196 aa19.08■□□□□ 0.65
MCF2L-203ENST00000375604 CLIC6Q96NY7 704 aa19.08■□□□□ 0.65
MCF2L-203ENST00000375604 MED10Q9BTT4 135 aa19.08■□□□□ 0.65
MCF2L-203ENST00000375604 TNNC1P63316 161 aa19.08■□□□□ 0.65
MCF2L-203ENST00000375604 SLF1Q9BQI6 1058 aa19.08■□□□□ 0.65
MCF2L-203ENST00000375604 EXOC7Q9UPT5 735 aa19.08■□□□□ 0.65
MCF2L-203ENST00000375604 CETN3O15182 167 aa19.08■□□□□ 0.64
MCF2L-203ENST00000375604 GSPT1P15170 499 aaKnown RBP19.08■□□□□ 0.64
MCF2L-203ENST00000375604 ATP2A2P16615 1042 aaKnown RBP19.08■□□□□ 0.64
MCF2L-203ENST00000375604 CRKLP46109 303 aaKnown RBP19.08■□□□□ 0.64
MCF2L-203ENST00000375604 SUPT20HQ8NEM7 779 aa19.08■□□□□ 0.64
MCF2L-203ENST00000375604 GDAP1L1Q96MZ0 367 aa19.08■□□□□ 0.64
MCF2L-203ENST00000375604 MTRF1LQ9UGC7 380 aaKnown RBP19.08■□□□□ 0.64
MCF2L-203ENST00000375604 GIGYF1O75420 1035 aaPredicted RBP19.08■□□□□ 0.64
MCF2L-203ENST00000375604 VIMP08670 466 aaKnown RBP19.07■□□□□ 0.64
MCF2L-203ENST00000375604 ZNF654Q8IZM8 581 aa19.07■□□□□ 0.64
MCF2L-203ENST00000375604 LSM14BQ9BX40 385 aaKnown RBP19.07■□□□□ 0.64
MCF2L-203ENST00000375604 GAS7O60861 476 aa19.07■□□□□ 0.64
MCF2L-203ENST00000375604 DBNDD1Q9H9R9 158 aa19.07■□□□□ 0.64
MCF2L-203ENST00000375604 GAS8O95995 478 aa19.07■□□□□ 0.64
MCF2L-203ENST00000375604 KRT25Q7Z3Z0 450 aa19.07■□□□□ 0.64
MCF2L-203ENST00000375604 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.07■□□□□ 0.64
MCF2L-203ENST00000375604 RTEL1Q9NZ71 1219 aa19.07■□□□□ 0.64
MCF2L-203ENST00000375604 DNMT1P26358 1616 aaKnown RBP19.07■□□□□ 0.64
MCF2L-203ENST00000375604 PPP1R16BQ96T49 567 aa19.07■□□□□ 0.64
MCF2L-203ENST00000375604 CASC4Q6P4E1 433 aa19.07■□□□□ 0.64
MCF2L-203ENST00000375604 GPBP1Q86WP2 473 aa19.07■□□□□ 0.64
MCF2L-203ENST00000375604 ST7Q9NRC1 585 aa19.07■□□□□ 0.64
MCF2L-203ENST00000375604 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.07■□□□□ 0.64
MCF2L-203ENST00000375604 LIN9Q5TKA1 542 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 SMC1BQ8NDV3 1235 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 BEGAINQ9BUH8 593 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 CSADQ9Y600 493 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 ZNF827Q17R98 1081 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 BRDTQ58F21 947 aaPredicted RBP19.06■□□□□ 0.64
MCF2L-203ENST00000375604 DCUN1D2Q6PH85 259 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 CCDC121Q6ZUS5 278 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 APOL6Q9BWW8 343 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 SEC31BQ9NQW1 1179 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 ARHGEF10O15013 1369 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 ABCC2Q92887 1545 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 SNAP25P60880 206 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 CERKLQ49MI3 558 aaPredicted RBP19.06■□□□□ 0.64
MCF2L-203ENST00000375604 RRAGAQ7L523 313 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 PALD1Q9ULE6 856 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 SYNJ2BP-COX16A0A087WUM0 186 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 M0QZ92 97 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 CEP104O60308 925 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 ABCB4P21439 1286 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 ADD1P35611 737 aaKnown RBP19.06■□□□□ 0.64
MCF2L-203ENST00000375604 DYNLL1P63167 89 aaKnown RBP19.06■□□□□ 0.64
MCF2L-203ENST00000375604 KCTD1Q719H9 257 aa19.06■□□□□ 0.64
MCF2L-203ENST00000375604 ANKS4BQ8N8V4 417 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms