RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 TNNQ9UQP3 1299 aa4.67□□□□□ -1.66
MCF2-203ENST00000370576 NID2Q14112 1375 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 GRXCR2A6NFK2 248 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 RAC2P15153 192 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 DGKGP49619 791 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 PURAQ00577 322 aaKnown RBP4.66□□□□□ -1.66
MCF2-203ENST00000370576 ANKRD45Q5TZF3 282 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 CLEC17AQ6ZS10 378 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 RNF180Q86T96 592 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 SIX5Q8N196 739 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 OGFOD1Q8N543 542 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 COL26A1Q96A83 441 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 KIFC2Q96AC6 838 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 FMNL2Q96PY5 1086 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 C2orf49Q9BVC5 232 aaPredicted RBP4.66□□□□□ -1.66
MCF2-203ENST00000370576 GPR108Q9NPR9 543 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 SPG7Q9UQ90 795 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 A0A0G2JMZ2 1700 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 PDS5AQ29RF7 1337 aaKnown RBP4.66□□□□□ -1.66
MCF2-203ENST00000370576 H7C1W4 665 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 EPB42P16452 691 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 MAP2K1Q02750 393 aaPredicted RBP4.66□□□□□ -1.66
MCF2-203ENST00000370576 DIXDC1Q155Q3 683 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 ENOX2Q16206 610 aaKnown RBP4.66□□□□□ -1.66
MCF2-203ENST00000370576 CCDC92Q53HC0 331 aaPredicted RBP4.66□□□□□ -1.66
MCF2-203ENST00000370576 ZNF790Q6PG37 636 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 DGKHQ86XP1 1220 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 NUDT12Q9BQG2 462 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 TSPYL2Q9H2G4 693 aaPredicted RBP4.66□□□□□ -1.66
MCF2-203ENST00000370576 YY1AP1Q9H869 796 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 BIN2Q9UBW5 565 aaPredicted RBP4.66□□□□□ -1.66
MCF2-203ENST00000370576 PHIPQ8WWQ0 1821 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 A6NCN8 305 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 CSF1RP07333 972 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 VARSP26640 1264 aaKnown RBP4.66□□□□□ -1.66
MCF2-203ENST00000370576 UBA7P41226 1012 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 ATP8B2P98198 1209 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 CTDSPL2Q05D32 466 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 CNGB1Q14028 1251 aaPredicted RBP4.66□□□□□ -1.66
MCF2-203ENST00000370576 BMP2KLQ5H9B9 411 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 C11orf74Q86VG3 221 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 NDUFAF2Q8N183 169 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 SLC4A9Q96Q91 983 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 USP44Q9H0E7 712 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 C9orf78Q9NZ63 289 aaPredicted RBP4.66□□□□□ -1.66
MCF2-203ENST00000370576 MAFFQ9ULX9 164 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 ADAMTSL1Q8N6G6 1762 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 PALLDQ8WX93 1383 aa4.66□□□□□ -1.66
MCF2-203ENST00000370576 TMEM110-MUSTN1A8MSY1 372 aa4.65□□□□□ -1.66
MCF2-203ENST00000370576 ERVV-1B6SEH8 477 aa4.65□□□□□ -1.66
MCF2-203ENST00000370576 MAN2A2P49641 1150 aa4.65□□□□□ -1.66
MCF2-203ENST00000370576 IRX3P78415 501 aaPredicted RBP4.65□□□□□ -1.66
MCF2-203ENST00000370576 CCDC129Q6ZRS4 1044 aa4.65□□□□□ -1.66
MCF2-203ENST00000370576 DZIP3Q86Y13 1208 aaKnown RBP4.65□□□□□ -1.66
MCF2-203ENST00000370576 ANKMY2Q8IV38 441 aa4.65□□□□□ -1.66
MCF2-203ENST00000370576 DUSP9Q99956 384 aaKnown RBP4.65□□□□□ -1.66
MCF2-203ENST00000370576 HYPKQ9NX55 129 aa4.65□□□□□ -1.66
MCF2-203ENST00000370576 UBAP1LF5GYI3 381 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 BOLA2-SMG1P6H3BVE0 249 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 SLC26A4O43511 780 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 IL2RBP14784 551 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 KCNA2P16389 499 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 PFKPQ01813 784 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 PPP2R5AQ15172 486 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 CCDC30Q5VVM6 783 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 TRAF7Q6Q0C0 670 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 CAPN12Q6ZSI9 719 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 FBXL16Q8N461 479 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 AFAP1L2Q8N4X5 818 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 SMARCC1Q92922 1105 aaPredicted RBP4.65□□□□□ -1.67
MCF2-203ENST00000370576 KIF2CQ99661 725 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 RHOBTB2Q9BYZ6 727 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 HMOX1P09601 288 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 APBA1Q02410 837 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 SHROOM1Q2M3G4 852 aaPredicted RBP4.65□□□□□ -1.67
MCF2-203ENST00000370576 MSL1Q68DK7 614 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 RASSF3Q86WH2 238 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 APPBP2Q92624 585 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 PAWRQ96IZ0 340 aaKnown RBP4.65□□□□□ -1.67
MCF2-203ENST00000370576 FAM13BQ9NYF5 915 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 PPARGC1AQ9UBK2 798 aaKnown RBP4.65□□□□□ -1.67
MCF2-203ENST00000370576 XPO7Q9UIA9 1087 aaKnown RBP4.65□□□□□ -1.67
MCF2-203ENST00000370576 PNMA8BQ9ULN7 279 aaPredicted RBP4.65□□□□□ -1.67
MCF2-203ENST00000370576 ZNF652Q9Y2D9 606 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 INPP5FQ9Y2H2 1132 aa4.65□□□□□ -1.67
MCF2-203ENST00000370576 GTPBP10A4D1E9 387 aaKnown RBP4.64□□□□□ -1.67
MCF2-203ENST00000370576 NBPF26B4DH59 902 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 AP1G2O75843 785 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 IGKV5-2P06315 115 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 CAPN3P20807 821 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 FAM102BQ5T8I3 360 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 NBPF14Q5TI25 921 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 MCM10Q7L590 875 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 ZSCAN29Q8IWY8 852 aaPredicted RBP4.64□□□□□ -1.67
MCF2-203ENST00000370576 NBPF15Q8N660 670 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 TEX9Q8N6V9 391 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 RNF217Q8TC41 542 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 EMID1Q96A84 441 aaPredicted RBP4.64□□□□□ -1.67
MCF2-203ENST00000370576 SARGQ9BW04 601 aa4.64□□□□□ -1.67
MCF2-203ENST00000370576 DCAF16Q9NXF7 216 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms