RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 SERPINB13Q9UIV8 391 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 E7EWF7 191 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 CYLC1P35663 651 aaPredicted RBP12.05□□□□□ -0.48
PTPRK-205ENST00000368213 HAUS7Q99871 368 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 ADPGKQ9BRR6 497 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 NAA15Q9BXJ9 866 aaKnown RBP12.05□□□□□ -0.48
PTPRK-205ENST00000368213 ANO3Q9BYT9 981 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 ADGRB3O60242 1522 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 PRPF6O94906 941 aaKnown RBP12.05□□□□□ -0.48
PTPRK-205ENST00000368213 HOXD10P28358 340 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 HLFQ16534 295 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 FAM102BQ5T8I3 360 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 KANSL2Q9H9L4 492 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 NRBP2Q9NSY0 501 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 C1orf167Q5SNV9 1468 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 A0A0G2JLW4 131 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 SGSM2O43147 1006 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 KMT5BQ4FZB7 885 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 APOBEC3FQ8IUX4 373 aaKnown RBP12.05□□□□□ -0.48
PTPRK-205ENST00000368213 COPRSQ9NQ92 184 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 CLASP1Q7Z460 1538 aa12.05□□□□□ -0.48
PTPRK-205ENST00000368213 SASH1O94885 1247 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 TTLL1O95922 423 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 PRPHP41219 470 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 CNNM4Q6P4Q7 775 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 SEPT14Q6ZU15 432 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 TSPYL1Q9H0U9 437 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 VPS54Q9P1Q0 977 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 SNX16P57768 344 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 PTPN14Q15678 1187 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 GIMAP6Q6P9H5 292 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 CCDC50Q8IVM0 306 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 DYDC1Q8WWB3 177 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 KIFAP3Q92845 792 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 KIF2AO00139 706 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-205ENST00000368213 CHRNA5P30532 468 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 UBE3CQ15386 1083 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 Q3C1V9 767 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 DACT1Q9NYF0 836 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 TNKSO95271 1327 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 DYNLL1P63167 89 aaKnown RBP12.04□□□□□ -0.48
PTPRK-205ENST00000368213 XKR9Q5GH70 373 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 TEKT3Q9BXF9 490 aa12.04□□□□□ -0.48
PTPRK-205ENST00000368213 RAD51AP2Q09MP3 1159 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 BIRC2Q13490 618 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 HLTFQ14527 1009 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTPRK-205ENST00000368213 KIAA0753Q2KHM9 967 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 PLA2G4DQ86XP0 818 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 COA7Q96BR5 231 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 NOX5Q96PH1 765 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 GOLGA6L10A0A0M3HER8 536 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 URI1O94763 535 aaPredicted RBP12.03□□□□□ -0.48
PTPRK-205ENST00000368213 PPP1R2P41236 205 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 YARSP54577 528 aaKnown RBP12.03□□□□□ -0.48
PTPRK-205ENST00000368213 HERC4Q5GLZ8 1057 aaPredicted RBP12.03□□□□□ -0.48
PTPRK-205ENST00000368213 USP26Q9BXU7 913 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 JADE2Q9NQC1 790 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 USP25Q9UHP3 1055 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 KCNJ14Q9UNX9 436 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 PCDHA1Q9Y5I3 950 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 SPATA31A1Q5TZJ5 1347 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 H0YHG0 523 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 PLCB3Q01970 1234 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 LLPHQ9BRT6 129 aaKnown RBP12.03□□□□□ -0.48
PTPRK-205ENST00000368213 SNX14Q9Y5W7 946 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 GCNT3O95395 438 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 ARL1P40616 181 aaPredicted RBP12.03□□□□□ -0.48
PTPRK-205ENST00000368213 DIXDC1Q155Q3 683 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 AMNQ9BXJ7 453 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 ZNF341Q9BYN7 854 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 IKBKGQ9Y6K9 419 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 UBXN1Q04323 297 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 PODNQ7Z5L7 613 aa12.03□□□□□ -0.48
PTPRK-205ENST00000368213 MRPL44Q9H9J2 332 aaKnown RBP12.03□□□□□ -0.48
PTPRK-205ENST00000368213 NEMFO60524 1076 aa12.02□□□□□ -0.48
PTPRK-205ENST00000368213 CRKP46108 304 aa12.02□□□□□ -0.48
PTPRK-205ENST00000368213 GPATCH4Q5T3I0 446 aaKnown RBP12.02□□□□□ -0.48
PTPRK-205ENST00000368213 EHBP1Q8NDI1 1231 aa12.02□□□□□ -0.48
PTPRK-205ENST00000368213 UBXN4Q92575 508 aa12.02□□□□□ -0.48
PTPRK-205ENST00000368213 WRNIP1Q96S55 665 aa12.02□□□□□ -0.48
PTPRK-205ENST00000368213 GPR108Q9NPR9 543 aa12.02□□□□□ -0.48
PTPRK-205ENST00000368213 PLA2R1Q13018 1463 aa12.02□□□□□ -0.48
PTPRK-205ENST00000368213 CSPG5O95196 566 aa12.02□□□□□ -0.49
PTPRK-205ENST00000368213 PCP11498 1178 aaKnown RBP12.02□□□□□ -0.49
PTPRK-205ENST00000368213 KCTD1Q719H9 257 aa12.02□□□□□ -0.49
PTPRK-205ENST00000368213 FMNL3Q8IVF7 1028 aa12.02□□□□□ -0.49
PTPRK-205ENST00000368213 BRIP1Q9BX63 1249 aa12.02□□□□□ -0.49
PTPRK-205ENST00000368213 CYP19A1P11511 503 aaPredicted RBP12.02□□□□□ -0.49
PTPRK-205ENST00000368213 PTGS1P23219 599 aa12.02□□□□□ -0.49
PTPRK-205ENST00000368213 CPSF1Q10570 1443 aaKnown RBP12.02□□□□□ -0.49
PTPRK-205ENST00000368213 CAMSAP1Q5T5Y3 1602 aa12.02□□□□□ -0.49
PTPRK-205ENST00000368213 MYZAPP0CAP1 466 aa12.02□□□□□ -0.49
PTPRK-205ENST00000368213 BMP3P12645 472 aa12.02□□□□□ -0.49
PTPRK-205ENST00000368213 KRT9P35527 623 aa12.02□□□□□ -0.49
PTPRK-205ENST00000368213 NFIXQ14938 502 aa12.02□□□□□ -0.49
PTPRK-205ENST00000368213 DYMQ7RTS9 669 aa12.02□□□□□ -0.49
PTPRK-205ENST00000368213 CRACR2AQ9BSW2 395 aa12.02□□□□□ -0.49
PTPRK-205ENST00000368213 MAK16Q9BXY0 300 aaKnown RBP12.02□□□□□ -0.49
PTPRK-205ENST00000368213 TBC1D7Q9P0N9 293 aa12.02□□□□□ -0.49
PTPRK-205ENST00000368213 GOLGA6L9A6NEM1 432 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms