RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 NEUROD1Q13562 356 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 CDCP2Q5VXM1 449 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 TLDC1Q6P9B6 456 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 LDHAL6AQ6ZMR3 332 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 KCNK18Q7Z418 384 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 CNPY4Q8N129 248 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 HOXB13Q92826 284 aaPredicted RBP2.54□□□□□ -2
SMARCAD1-202ENST00000359052 NBPF3Q9H094 633 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 COL15A1P39059 1388 aa2.54□□□□□ -2
SMARCAD1-202ENST00000359052 SPATA31C2B4DYI2 1134 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 EDNRBP24530 442 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 MMP14P50281 582 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 GALNT1Q10472 559 aaPredicted RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 SNX17Q15036 470 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 NBPF10Q6P3W6 841 aaKnown RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 TRIM50Q86XT4 487 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 LYSMD2Q8IV50 215 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 MIGA1Q8NAN2 632 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 STK35Q8TDR2 534 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 OSBP2Q969R2 916 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 AGXT2Q9BYV1 514 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 GPC6Q9Y625 555 aaPredicted RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 EP400Q96L91 3159 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 AFDNP55196 1824 aaKnown RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 GPATCH8Q9UKJ3 1502 aaKnown RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 AHDC1Q5TGY3 1603 aaPredicted RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 ZNF500O60304 480 aaPredicted RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 ATP1A2P50993 1020 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 CCR5P51681 352 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 ZNF445P59923 1031 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 PFKPQ01813 784 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 CLCQ05315 142 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 TMEM201Q5SNT2 666 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 DENND5AQ6IQ26 1287 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 CXorf57Q6NSI4 855 aaKnown RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 PPFIBP1Q86W92 1011 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 ZSCAN29Q8IWY8 852 aaPredicted RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 FOXJ1Q92949 421 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 E2F7Q96AV8 911 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 STRA6Q9BX79 667 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 ACAD8Q9UKU7 415 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 LZTS1Q9Y250 596 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 COL16A1Q07092 1604 aaPredicted RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 TNS1Q9HBL0 1735 aaKnown RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 VDRP11473 427 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 RTN1Q16799 776 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 RNF20Q5VTR2 975 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 SLFN12Q8IYM2 578 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 TNS4Q8IZW8 715 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 ZBTB38Q8NAP3 1195 aaPredicted RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 ZNF511Q8NB15 262 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 CHFRQ96EP1 664 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 SUV39H2Q9H5I1 410 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 LUC7L2Q9Y383 392 aaKnown RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 SNCAIPQ9Y6H5 919 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 ERBB3P21860 1342 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 GPR3P46089 330 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 NFX1Q12986 1120 aaKnown RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 Q3C1V9 767 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 ZC3H12BQ5HYM0 836 aaKnown RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 DGKKQ5KSL6 1271 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 RINLQ6ZS11 566 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 HS2ST1Q7LGA3 356 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 OR6P1Q8NGX9 317 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 ZNF296Q8WUU4 475 aaPredicted RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 ISCA1Q9BUE6 129 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 WDR12Q9GZL7 423 aaKnown RBP2.53□□□□□ -2
SMARCAD1-202ENST00000359052 CYLDQ9NQC7 956 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 SCAPERQ9BY12 1400 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 NEO1Q92859 1461 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 ADGRB3O60242 1522 aa2.53□□□□□ -2
SMARCAD1-202ENST00000359052 PARP4Q9UKK3 1724 aaKnown RBP2.53□□□□□ -2.01
SMARCAD1-202ENST00000359052 NBPF26B4DH59 902 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 NR3C2P08235 984 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 NUDT7P0C024 238 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 PTPN11Q06124 597 aaPredicted RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 TANGO2Q6ICL3 276 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 TATDN1Q6P1N9 297 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 PPARGC1BQ86YN6 1023 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 DMRTA2Q96SC8 542 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 ALDH8A1Q9H2A2 487 aaPredicted RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 CEP72Q9P209 647 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 WASF3Q9UPY6 502 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 CENPJQ9HC77 1338 aaPredicted RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 SOGA1O94964 1423 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 CLTCL1P53675 1640 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 IQSEC2Q5JU85 1478 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 CCDC144AA2RUR9 1427 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 ERVH48-1M5A8F1 160 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 AOC2O75106 756 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 RAG1P15918 1043 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 CASP5P51878 434 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 FAM98CQ17RN3 349 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 ALDH1L2Q3SY69 923 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 CCDC62Q6P9F0 684 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 GLYCTKQ8IVS8 523 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 SUGP1Q8IWZ8 645 aaKnown RBP2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 ZNF384Q8TF68 577 aa2.52□□□□□ -2.01
SMARCAD1-202ENST00000359052 ASB2Q96Q27 587 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms