RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 USP17L20D6RJB6 530 aa19.34■□□□□ 0.69
COPE-202ENST00000349893 CYBAP13498 195 aa19.34■□□□□ 0.69
COPE-202ENST00000349893 ATN1P54259 1190 aaPredicted RBP19.34■□□□□ 0.69
COPE-202ENST00000349893 USP17L24Q0WX57 530 aa19.34■□□□□ 0.69
COPE-202ENST00000349893 CRACR2BQ8N4Y2 399 aaPredicted RBP19.34■□□□□ 0.69
COPE-202ENST00000349893 TRPV1Q8NER1 839 aa19.34■□□□□ 0.69
COPE-202ENST00000349893 TGFBRAP1Q8WUH2 860 aa19.34■□□□□ 0.69
COPE-202ENST00000349893 API5Q9BZZ5 524 aaKnown RBP19.34■□□□□ 0.69
COPE-202ENST00000349893 TTYH1Q9H313 450 aaPredicted RBP19.34■□□□□ 0.69
COPE-202ENST00000349893 PALD1Q9ULE6 856 aa19.34■□□□□ 0.69
COPE-202ENST00000349893 UQCRFS1P1P0C7P4 283 aa19.33■□□□□ 0.68
COPE-202ENST00000349893 C9orf50Q5SZB4 431 aa19.33■□□□□ 0.68
COPE-202ENST00000349893 NAA16Q6N069 864 aaPredicted RBP19.33■□□□□ 0.68
COPE-202ENST00000349893 CATSPERGQ6ZRH7 1159 aa19.33■□□□□ 0.68
COPE-202ENST00000349893 ADGRA1Q86SQ6 560 aa19.33■□□□□ 0.68
COPE-202ENST00000349893 MAPKAPK5Q8IW41 473 aa19.33■□□□□ 0.68
COPE-202ENST00000349893 NOB1Q9ULX3 412 aaKnown RBP19.33■□□□□ 0.68
COPE-202ENST00000349893 TMEM265A0A087WTH1 108 aa19.32■□□□□ 0.68
COPE-202ENST00000349893 ATP2B2Q01814 1243 aa19.32■□□□□ 0.68
COPE-202ENST00000349893 GORABQ5T7V8 394 aa19.32■□□□□ 0.68
COPE-202ENST00000349893 C1orf53Q5VUE5 145 aa19.32■□□□□ 0.68
COPE-202ENST00000349893 TATDN1Q6P1N9 297 aa19.32■□□□□ 0.68
COPE-202ENST00000349893 SLC39A5Q6ZMH5 540 aa19.32■□□□□ 0.68
COPE-202ENST00000349893 NPLOC4Q8TAT6 608 aa19.32■□□□□ 0.68
COPE-202ENST00000349893 TRIM34Q9BYJ4 488 aa19.32■□□□□ 0.68
COPE-202ENST00000349893 KIAA1683Q9H0B3 1180 aa19.32■□□□□ 0.68
COPE-202ENST00000349893 CWC22Q9HCG8 908 aaKnown RBP19.32■□□□□ 0.68
COPE-202ENST00000349893 GH2P01242 217 aa19.31■□□□□ 0.68
COPE-202ENST00000349893 CT47B1P0C2W7 299 aaPredicted RBP19.31■□□□□ 0.68
COPE-202ENST00000349893 CYP2C19P33261 490 aa19.31■□□□□ 0.68
COPE-202ENST00000349893 OLFML2BQ68BL8 750 aa19.31■□□□□ 0.68
COPE-202ENST00000349893 ATF7IPQ6VMQ6 1270 aa19.31■□□□□ 0.68
COPE-202ENST00000349893 TRMT2AQ8IZ69 625 aaKnown RBP19.31■□□□□ 0.68
COPE-202ENST00000349893 ARRDC4Q8NCT1 418 aa19.31■□□□□ 0.68
COPE-202ENST00000349893 SYMPKQ92797 1274 aaKnown RBP19.31■□□□□ 0.68
COPE-202ENST00000349893 BTBD7Q9P203 1132 aa19.31■□□□□ 0.68
COPE-202ENST00000349893 HLA-DOAP06340 250 aa19.3■□□□□ 0.68
COPE-202ENST00000349893 GNAI3P08754 354 aa19.3■□□□□ 0.68
COPE-202ENST00000349893 VCAM1P19320 739 aa19.3■□□□□ 0.68
COPE-202ENST00000349893 CNGA1P29973 690 aa19.3■□□□□ 0.68
COPE-202ENST00000349893 USP14P54578 494 aa19.3■□□□□ 0.68
COPE-202ENST00000349893 MYLIPQ8WY64 445 aa19.3■□□□□ 0.68
COPE-202ENST00000349893 PDLIM7Q9NR12 457 aa19.3■□□□□ 0.68
COPE-202ENST00000349893 ATP11BQ9Y2G3 1177 aa19.3■□□□□ 0.68
COPE-202ENST00000349893 NDUFB9Q9Y6M9 179 aa19.3■□□□□ 0.68
COPE-202ENST00000349893 IVNS1ABPQ9Y6Y0 642 aa19.3■□□□□ 0.68
COPE-202ENST00000349893 GJC2Q5T442 439 aaPredicted RBP19.29■□□□□ 0.68
COPE-202ENST00000349893 BADQ92934 168 aa19.29■□□□□ 0.68
COPE-202ENST00000349893 EHD4Q9H223 541 aa19.29■□□□□ 0.68
COPE-202ENST00000349893 MYO5AQ9Y4I1 1855 aaKnown RBP19.28■□□□□ 0.68
COPE-202ENST00000349893 MYH1P12882 1939 aa19.28■□□□□ 0.68
COPE-202ENST00000349893 SPDYE16A6NNV3 312 aaPredicted RBP19.28■□□□□ 0.68
COPE-202ENST00000349893 FEZ1Q99689 392 aa19.28■□□□□ 0.68
COPE-202ENST00000349893 A0A0G2JMZ2 1700 aa19.28■□□□□ 0.68
COPE-202ENST00000349893 TRIM43BA6NCK2 446 aa19.27■□□□□ 0.68
COPE-202ENST00000349893 KBTBD13C9JR72 458 aa19.27■□□□□ 0.68
COPE-202ENST00000349893 SEPT4O43236 478 aa19.27■□□□□ 0.68
COPE-202ENST00000349893 STRNO43815 780 aa19.27■□□□□ 0.68
COPE-202ENST00000349893 CYP2E1P05181 493 aaPredicted RBP19.27■□□□□ 0.68
COPE-202ENST00000349893 FOSL2P15408 326 aa19.27■□□□□ 0.68
COPE-202ENST00000349893 TRIM60Q495X7 471 aa19.27■□□□□ 0.68
COPE-202ENST00000349893 WDR78Q5VTH9 848 aa19.27■□□□□ 0.68
COPE-202ENST00000349893 ARHGAP45Q92619 1136 aa19.27■□□□□ 0.68
COPE-202ENST00000349893 TRIM43Q96BQ3 446 aaPredicted RBP19.27■□□□□ 0.68
COPE-202ENST00000349893 ZNF512BQ96KM6 892 aaPredicted RBP19.27■□□□□ 0.68
COPE-202ENST00000349893 GPR108Q9NPR9 543 aa19.27■□□□□ 0.68
COPE-202ENST00000349893 SAP30BPQ9UHR5 308 aaKnown RBP19.27■□□□□ 0.68
COPE-202ENST00000349893 ZYXQ15942 572 aaKnown RBP19.26■□□□□ 0.67
COPE-202ENST00000349893 SH3RF1Q7Z6J0 888 aa19.26■□□□□ 0.67
COPE-202ENST00000349893 SERPINB13Q9UIV8 391 aa19.26■□□□□ 0.67
COPE-202ENST00000349893 CHD9Q3L8U1 2897 aa19.26■□□□□ 0.67
COPE-202ENST00000349893 ADORA2AP29274 412 aa19.25■□□□□ 0.67
COPE-202ENST00000349893 CERS3Q8IU89 383 aa19.25■□□□□ 0.67
COPE-202ENST00000349893 SHCBP1Q8NEM2 672 aa19.25■□□□□ 0.67
COPE-202ENST00000349893 ACER1Q8TDN7 264 aa19.25■□□□□ 0.67
COPE-202ENST00000349893 CDCA7LQ96GN5 454 aa19.25■□□□□ 0.67
COPE-202ENST00000349893 PRDM5Q9NQX1 630 aaPredicted RBP19.25■□□□□ 0.67
COPE-202ENST00000349893 SNRKQ9NRH2 765 aa19.25■□□□□ 0.67
COPE-202ENST00000349893 G3BP1Q13283 466 aaKnown RBP eCLIP19.24■□□□□ 0.676e-7■□□□□ 10.5
COPE-202ENST00000349893 MOV10L1Q9BXT6 1211 aaKnown RBP19.24■□□□□ 0.67
COPE-202ENST00000349893 RPAP3Q9H6T3 665 aaPredicted RBP19.24■□□□□ 0.67
COPE-202ENST00000349893 PNMA6EA0A0J9YXQ4 647 aa19.23■□□□□ 0.67
COPE-202ENST00000349893 ITGB8P26012 769 aa19.23■□□□□ 0.67
COPE-202ENST00000349893 DYNLL1P63167 89 aaKnown RBP19.23■□□□□ 0.67
COPE-202ENST00000349893 LRRC41Q15345 812 aa19.23■□□□□ 0.67
COPE-202ENST00000349893 ABCB5Q2M3G0 1257 aa19.23■□□□□ 0.67
COPE-202ENST00000349893 TJAP1Q5JTD0 557 aa19.23■□□□□ 0.67
COPE-202ENST00000349893 TTC39AQ5SRH9 613 aa19.23■□□□□ 0.67
COPE-202ENST00000349893 DPP9Q86TI2 863 aa19.23■□□□□ 0.67
COPE-202ENST00000349893 ABRAQ8N0Z2 381 aa19.23■□□□□ 0.67
COPE-202ENST00000349893 COBLO75128 1261 aa19.22■□□□□ 0.67
COPE-202ENST00000349893 GUCY1A2P33402 732 aa19.22■□□□□ 0.67
COPE-202ENST00000349893 ADCYAP1R1P41586 468 aa19.22■□□□□ 0.67
COPE-202ENST00000349893 RAB3GAP1Q15042 981 aa19.22■□□□□ 0.67
COPE-202ENST00000349893 CERKLQ49MI3 558 aaPredicted RBP19.22■□□□□ 0.67
COPE-202ENST00000349893 TNNI3KQ59H18 835 aa19.22■□□□□ 0.67
COPE-202ENST00000349893 CCDC158Q5M9N0 1113 aa19.22■□□□□ 0.67
COPE-202ENST00000349893 DBNDD2Q9BQY9 259 aa19.22■□□□□ 0.67
COPE-202ENST00000349893 SPATC1LQ9H0A9 340 aa19.22■□□□□ 0.67
COPE-202ENST00000349893 PIH1D3Q9NQM4 214 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms