RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 UQCRFS1P1P0C7P4 283 aa20.77■□□□□ 0.92
TRA2B-202ENST00000342294 CYP2C19P33261 490 aa20.77■□□□□ 0.92
TRA2B-202ENST00000342294 SMAD3P84022 425 aaKnown RBP20.77■□□□□ 0.92
TRA2B-202ENST00000342294 ATP2B2Q01814 1243 aa20.77■□□□□ 0.92
TRA2B-202ENST00000342294 GRB14Q14449 540 aa20.77■□□□□ 0.92
TRA2B-202ENST00000342294 LBX2Q6XYB7 198 aa20.77■□□□□ 0.92
TRA2B-202ENST00000342294 CATSPERGQ6ZRH7 1159 aa20.77■□□□□ 0.92
TRA2B-202ENST00000342294 TTYH1Q9H313 450 aaPredicted RBP20.77■□□□□ 0.92
TRA2B-202ENST00000342294 CWC22Q9HCG8 908 aaKnown RBP20.77■□□□□ 0.92
TRA2B-202ENST00000342294 TTC28Q96AY4 2481 aa20.77■□□□□ 0.91
TRA2B-202ENST00000342294 LTBP2Q14767 1821 aa20.76■□□□□ 0.91
TRA2B-202ENST00000342294 CYBAP13498 195 aa20.76■□□□□ 0.91
TRA2B-202ENST00000342294 CNGA1P29973 690 aa20.76■□□□□ 0.91
TRA2B-202ENST00000342294 SLC39A5Q6ZMH5 540 aa20.76■□□□□ 0.91
TRA2B-202ENST00000342294 TRIM34Q9BYJ4 488 aa20.76■□□□□ 0.91
TRA2B-202ENST00000342294 BTBD7Q9P203 1132 aa20.76■□□□□ 0.91
TRA2B-202ENST00000342294 ATP11BQ9Y2G3 1177 aa20.76■□□□□ 0.91
TRA2B-202ENST00000342294 GH2P01242 217 aa20.75■□□□□ 0.91
TRA2B-202ENST00000342294 SNX17Q15036 470 aa20.75■□□□□ 0.91
TRA2B-202ENST00000342294 TATDN1Q6P1N9 297 aa20.75■□□□□ 0.91
TRA2B-202ENST00000342294 MYLIPQ8WY64 445 aa20.75■□□□□ 0.91
TRA2B-202ENST00000342294 GJC2Q5T442 439 aaPredicted RBP20.74■□□□□ 0.91
TRA2B-202ENST00000342294 WDR78Q5VTH9 848 aa20.74■□□□□ 0.91
TRA2B-202ENST00000342294 TRMT2AQ8IZ69 625 aaKnown RBP20.74■□□□□ 0.91
TRA2B-202ENST00000342294 ARRDC4Q8NCT1 418 aa20.74■□□□□ 0.91
TRA2B-202ENST00000342294 BADQ92934 168 aa20.74■□□□□ 0.91
TRA2B-202ENST00000342294 KIAA1683Q9H0B3 1180 aa20.74■□□□□ 0.91
TRA2B-202ENST00000342294 SNRKQ9NRH2 765 aa20.74■□□□□ 0.91
TRA2B-202ENST00000342294 SAP30BPQ9UHR5 308 aaKnown RBP20.74■□□□□ 0.91
TRA2B-202ENST00000342294 EYSQ5T1H1 3165 aa20.73■□□□□ 0.91
TRA2B-202ENST00000342294 SPTBN5Q9NRC6 3674 aaKnown RBP20.73■□□□□ 0.91
TRA2B-202ENST00000342294 GNAI3P08754 354 aa20.73■□□□□ 0.91
TRA2B-202ENST00000342294 ZYXQ15942 572 aaKnown RBP20.73■□□□□ 0.91
TRA2B-202ENST00000342294 ATF7IPQ6VMQ6 1270 aa20.73■□□□□ 0.91
TRA2B-202ENST00000342294 CDCA7LQ96GN5 454 aa20.73■□□□□ 0.91
TRA2B-202ENST00000342294 IVNS1ABPQ9Y6Y0 642 aa20.73■□□□□ 0.91
TRA2B-202ENST00000342294 IGSF3O75054 1194 aa20.72■□□□□ 0.91
TRA2B-202ENST00000342294 CYP2E1P05181 493 aaPredicted RBP20.72■□□□□ 0.91
TRA2B-202ENST00000342294 HLA-DOAP06340 250 aa20.72■□□□□ 0.91
TRA2B-202ENST00000342294 VCAM1P19320 739 aa20.72■□□□□ 0.91
TRA2B-202ENST00000342294 FEZ1Q99689 392 aa20.72■□□□□ 0.91
TRA2B-202ENST00000342294 PDLIM7Q9NR12 457 aa20.72■□□□□ 0.91
TRA2B-202ENST00000342294 PRUNE2Q8WUY3 3088 aa20.72■□□□□ 0.91
TRA2B-202ENST00000342294 RLFQ13129 1914 aa20.71■□□□□ 0.91
TRA2B-202ENST00000342294 TRIM43BA6NCK2 446 aa20.71■□□□□ 0.91
TRA2B-202ENST00000342294 SPDYE16A6NNV3 312 aaPredicted RBP20.71■□□□□ 0.91
TRA2B-202ENST00000342294 CT47B1P0C2W7 299 aaPredicted RBP20.71■□□□□ 0.91
TRA2B-202ENST00000342294 USP14P54578 494 aa20.71■□□□□ 0.91
TRA2B-202ENST00000342294 TRIM60Q495X7 471 aa20.71■□□□□ 0.91
TRA2B-202ENST00000342294 C1orf53Q5VUE5 145 aa20.71■□□□□ 0.91
TRA2B-202ENST00000342294 OLFML2BQ68BL8 750 aa20.71■□□□□ 0.91
TRA2B-202ENST00000342294 SH3RF1Q7Z6J0 888 aa20.71■□□□□ 0.91
TRA2B-202ENST00000342294 ACER1Q8TDN7 264 aa20.71■□□□□ 0.91
TRA2B-202ENST00000342294 SYMPKQ92797 1274 aaKnown RBP20.71■□□□□ 0.91
TRA2B-202ENST00000342294 TRIM43Q96BQ3 446 aaPredicted RBP20.71■□□□□ 0.91
TRA2B-202ENST00000342294 FOCADQ5VW36 1801 aa20.7■□□□□ 0.9
TRA2B-202ENST00000342294 KBTBD13C9JR72 458 aa20.7■□□□□ 0.9
TRA2B-202ENST00000342294 FOSL2P15408 326 aa20.7■□□□□ 0.9
TRA2B-202ENST00000342294 DYNLL1P63167 89 aaKnown RBP20.7■□□□□ 0.9
TRA2B-202ENST00000342294 PRDM5Q9NQX1 630 aaPredicted RBP20.7■□□□□ 0.9
TRA2B-202ENST00000342294 CDK5RAP2Q96SN8 1893 aa20.7■□□□□ 0.9
TRA2B-202ENST00000342294 TMEM265A0A087WTH1 108 aa20.69■□□□□ 0.9
TRA2B-202ENST00000342294 SEPT4O43236 478 aa20.69■□□□□ 0.9
TRA2B-202ENST00000342294 G3BP1Q13283 466 aaKnown RBP eCLIP20.69■□□□□ 0.9
TRA2B-202ENST00000342294 EHD4Q9H223 541 aa20.69■□□□□ 0.9
TRA2B-202ENST00000342294 GPR108Q9NPR9 543 aa20.69■□□□□ 0.9
TRA2B-202ENST00000342294 PNMA6EA0A0J9YXQ4 647 aa20.68■□□□□ 0.9
TRA2B-202ENST00000342294 STRNO43815 780 aa20.68■□□□□ 0.9
TRA2B-202ENST00000342294 ADORA2AP29274 412 aa20.68■□□□□ 0.9
TRA2B-202ENST00000342294 ADCYAP1R1P41586 468 aa20.68■□□□□ 0.9
TRA2B-202ENST00000342294 ANO1Q5XXA6 986 aa20.68■□□□□ 0.9
TRA2B-202ENST00000342294 DPP9Q86TI2 863 aa20.68■□□□□ 0.9
TRA2B-202ENST00000342294 ARHGAP45Q92619 1136 aa20.68■□□□□ 0.9
TRA2B-202ENST00000342294 ZNF512BQ96KM6 892 aaPredicted RBP20.68■□□□□ 0.9
TRA2B-202ENST00000342294 MOV10L1Q9BXT6 1211 aaKnown RBP20.68■□□□□ 0.9
TRA2B-202ENST00000342294 RPAP3Q9H6T3 665 aaPredicted RBP20.68■□□□□ 0.9
TRA2B-202ENST00000342294 PIH1D3Q9NQM4 214 aaKnown RBP20.68■□□□□ 0.9
TRA2B-202ENST00000342294 SERPINB13Q9UIV8 391 aa20.68■□□□□ 0.9
TRA2B-202ENST00000342294 RAB3GAP1Q15042 981 aa20.67■□□□□ 0.9
TRA2B-202ENST00000342294 LRRC41Q15345 812 aa20.67■□□□□ 0.9
TRA2B-202ENST00000342294 TTC39AQ5SRH9 613 aa20.67■□□□□ 0.9
TRA2B-202ENST00000342294 DBNDD2Q9BQY9 259 aa20.67■□□□□ 0.9
TRA2B-202ENST00000342294 COBLO75128 1261 aa20.66■□□□□ 0.9
TRA2B-202ENST00000342294 ITGB8P26012 769 aa20.66■□□□□ 0.9
TRA2B-202ENST00000342294 GUCY1A2P33402 732 aa20.66■□□□□ 0.9
TRA2B-202ENST00000342294 ZAP70P43403 619 aa20.66■□□□□ 0.9
TRA2B-202ENST00000342294 EPHB4P54760 987 aa20.66■□□□□ 0.9
TRA2B-202ENST00000342294 TLE2Q04725 743 aa20.66■□□□□ 0.9
TRA2B-202ENST00000342294 ABCB5Q2M3G0 1257 aa20.66■□□□□ 0.9
TRA2B-202ENST00000342294 CERKLQ49MI3 558 aaPredicted RBP20.66■□□□□ 0.9
TRA2B-202ENST00000342294 TNNI3KQ59H18 835 aa20.66■□□□□ 0.9
TRA2B-202ENST00000342294 CCDC158Q5M9N0 1113 aa20.66■□□□□ 0.9
TRA2B-202ENST00000342294 FPGT-TNNI3KV9GXZ4 949 aa20.66■□□□□ 0.9
TRA2B-202ENST00000342294 ZNF236Q9UL36 1845 aa20.65■□□□□ 0.9
TRA2B-202ENST00000342294 CYP7A1P22680 504 aa20.65■□□□□ 0.9
TRA2B-202ENST00000342294 PRAMEF19Q5SWL8 479 aa20.65■□□□□ 0.9
TRA2B-202ENST00000342294 SHCBP1Q8NEM2 672 aa20.65■□□□□ 0.9
TRA2B-202ENST00000342294 FERMT2Q96AC1 680 aa20.65■□□□□ 0.9
TRA2B-202ENST00000342294 GNAI2P04899 355 aa20.64■□□□□ 0.89
TRA2B-202ENST00000342294 SHMT1P34896 483 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms