RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 ZFYVE28Q9HCC9 887 aa21.22■□□□□ 0.99
CCS-201ENST00000310190 SYNPO2Q9UMS6 1093 aa21.22■□□□□ 0.99
CCS-201ENST00000310190 LAMA4Q16363 1823 aa21.22■□□□□ 0.99
CCS-201ENST00000310190 MINDY4BA8MYZ0 360 aa21.21■□□□□ 0.99
CCS-201ENST00000310190 PDHXO00330 501 aa21.21■□□□□ 0.99
CCS-201ENST00000310190 TBC1D8O95759 1140 aa21.21■□□□□ 0.99
CCS-201ENST00000310190 AKR1B1P15121 316 aa21.21■□□□□ 0.99
CCS-201ENST00000310190 USP14P54578 494 aa21.21■□□□□ 0.99
CCS-201ENST00000310190 PDE4BQ07343 736 aa21.21■□□□□ 0.99
CCS-201ENST00000310190 SIAH1Q8IUQ4 282 aa21.21■□□□□ 0.99
CCS-201ENST00000310190 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.21■□□□□ 0.99
CCS-201ENST00000310190 R3HDMLQ9H3Y0 253 aa21.21■□□□□ 0.99
CCS-201ENST00000310190 KANSL2Q9H9L4 492 aa21.21■□□□□ 0.99
CCS-201ENST00000310190 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.21■□□□□ 0.99
CCS-201ENST00000310190 IGKV6D-41A0A0C4DH26 115 aa21.2■□□□□ 0.98
CCS-201ENST00000310190 ORC4O43929 436 aa21.2■□□□□ 0.98
CCS-201ENST00000310190 PABPC4Q13310 644 aaKnown RBP eCLIP21.2■□□□□ 0.982e-7■■■□□ 18
CCS-201ENST00000310190 SEPT2Q15019 361 aa21.2■□□□□ 0.98
CCS-201ENST00000310190 TAF1CQ15572 869 aaPredicted RBP21.2■□□□□ 0.98
CCS-201ENST00000310190 USP17L2Q6R6M4 530 aa21.2■□□□□ 0.98
CCS-201ENST00000310190 SGSM2O43147 1006 aa21.19■□□□□ 0.98
CCS-201ENST00000310190 HMGCS2P54868 508 aa21.19■□□□□ 0.98
CCS-201ENST00000310190 MTMR2Q13614 643 aa21.19■□□□□ 0.98
CCS-201ENST00000310190 C17orf99Q6UX52 265 aa21.19■□□□□ 0.98
CCS-201ENST00000310190 PARK7Q99497 189 aaKnown RBP21.19■□□□□ 0.98
CCS-201ENST00000310190 MKNK2Q9HBH9 465 aa21.19■□□□□ 0.98
CCS-201ENST00000310190 EMILIN3Q9NT22 766 aa21.19■□□□□ 0.98
CCS-201ENST00000310190 TMX2Q9Y320 296 aa21.19■□□□□ 0.98
CCS-201ENST00000310190 NOVP48745 357 aa21.18■□□□□ 0.98
CCS-201ENST00000310190 RAB3GAP1Q15042 981 aa21.18■□□□□ 0.98
CCS-201ENST00000310190 NEDD1Q8NHV4 660 aa21.18■□□□□ 0.98
CCS-201ENST00000310190 MKL1Q969V6 931 aa21.18■□□□□ 0.98
CCS-201ENST00000310190 IL25Q9H293 177 aa21.18■□□□□ 0.98
CCS-201ENST00000310190 NYAP2Q9P242 653 aa21.18■□□□□ 0.98
CCS-201ENST00000310190 TSKSQ9UJT2 592 aa21.18■□□□□ 0.98
CCS-201ENST00000310190 PNMA3Q9UL41 463 aa21.18■□□□□ 0.98
CCS-201ENST00000310190 A0A1W2PRG0 241 aa21.17■□□□□ 0.98
CCS-201ENST00000310190 FKTNO75072 461 aa21.17■□□□□ 0.98
CCS-201ENST00000310190 GADL1Q6ZQY3 521 aa21.17■□□□□ 0.98
CCS-201ENST00000310190 ZNF444Q8N0Y2 327 aaPredicted RBP21.17■□□□□ 0.98
CCS-201ENST00000310190 ZNF296Q8WUU4 475 aaPredicted RBP21.17■□□□□ 0.98
CCS-201ENST00000310190 LPAR1Q92633 364 aa21.17■□□□□ 0.98
CCS-201ENST00000310190 SH2D4AQ9H788 454 aa21.17■□□□□ 0.98
CCS-201ENST00000310190 TMOD4Q9NZQ9 345 aa21.17■□□□□ 0.98
CCS-201ENST00000310190 CTNNA3Q9UI47 895 aa21.17■□□□□ 0.98
CCS-201ENST00000310190 BCRP11274 1271 aa21.16■□□□□ 0.98
CCS-201ENST00000310190 ICA1Q05084 483 aa21.16■□□□□ 0.98
CCS-201ENST00000310190 PPP4R3BQ5MIZ7 849 aa21.16■□□□□ 0.98
CCS-201ENST00000310190 TREML2Q5T2D2 321 aa21.16■□□□□ 0.98
CCS-201ENST00000310190 ACER1Q8TDN7 264 aa21.16■□□□□ 0.98
CCS-201ENST00000310190 STAG1Q8WVM7 1258 aa21.16■□□□□ 0.98
CCS-201ENST00000310190 ARHGEF10LQ9HCE6 1279 aa21.16■□□□□ 0.98
CCS-201ENST00000310190 MPHOSPH10O00566 681 aaKnown RBP21.15■□□□□ 0.98
CCS-201ENST00000310190 LBX2Q6XYB7 198 aa21.15■□□□□ 0.98
CCS-201ENST00000310190 GTF3C2Q8WUA4 911 aaPredicted RBP21.15■□□□□ 0.98
CCS-201ENST00000310190 NBPF3Q9H094 633 aa21.15■□□□□ 0.98
CCS-201ENST00000310190 GCLCP48506 637 aaPredicted RBP21.14■□□□□ 0.97
CCS-201ENST00000310190 SP3Q02447 781 aa21.14■□□□□ 0.97
CCS-201ENST00000310190 COL13A1Q5TAT6 717 aaPredicted RBP21.14■□□□□ 0.97
CCS-201ENST00000310190 TCP11L1Q9NUJ3 509 aa21.14■□□□□ 0.97
CCS-201ENST00000310190 MTMR4Q9NYA4 1195 aa21.14■□□□□ 0.97
CCS-201ENST00000310190 TACC3Q9Y6A5 838 aa21.14■□□□□ 0.97
CCS-201ENST00000310190 RLFQ13129 1914 aa21.14■□□□□ 0.97
CCS-201ENST00000310190 AKNAD1Q5T1N1 836 aa21.13■□□□□ 0.97
CCS-201ENST00000310190 MAP4K1Q92918 833 aa21.13■□□□□ 0.97
CCS-201ENST00000310190 ERO1AQ96HE7 468 aa21.13■□□□□ 0.97
CCS-201ENST00000310190 ASCC2Q9H1I8 757 aaPredicted RBP21.13■□□□□ 0.97
CCS-201ENST00000310190 RNF41Q9H4P4 317 aaPredicted RBP21.13■□□□□ 0.97
CCS-201ENST00000310190 VCPKMTQ9H867 229 aa21.13■□□□□ 0.97
CCS-201ENST00000310190 MYH4Q9Y623 1939 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 USP17L15C9J2P7 530 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 USP17L13C9JLJ4 530 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 USP17L11C9JVI0 530 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 USP17L18D6R9N7 530 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 USP17L22D6RA61 530 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 USP17L17D6RBQ6 530 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 USP17L19D6RCP7 530 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 USP17L20D6RJB6 530 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 ZNF213O14771 459 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 GNRH1P01148 92 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 EEF2P13639 858 aaKnown RBP21.12■□□□□ 0.97
CCS-201ENST00000310190 VCAM1P19320 739 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 OSBPP22059 807 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 CTDSPL2Q05D32 466 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 USP17L24Q0WX57 530 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 PKN2Q16513 984 aaKnown RBP21.12■□□□□ 0.97
CCS-201ENST00000310190 CATSPERGQ6ZRH7 1159 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 MORF4L1Q9UBU8 362 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 HTTP42858 3142 aa21.12■□□□□ 0.97
CCS-201ENST00000310190 MYPNQ86TC9 1320 aa21.11■□□□□ 0.97
CCS-201ENST00000310190 PRDM1O75626 825 aa21.11■□□□□ 0.97
CCS-201ENST00000310190 TFAP4Q01664 338 aa21.11■□□□□ 0.97
CCS-201ENST00000310190 FAM110CQ1W6H9 321 aa21.11■□□□□ 0.97
CCS-201ENST00000310190 CTU1Q7Z7A3 348 aaKnown RBP21.11■□□□□ 0.97
CCS-201ENST00000310190 SKAP1Q86WV1 359 aa21.11■□□□□ 0.97
CCS-201ENST00000310190 FEZ1Q99689 392 aa21.11■□□□□ 0.97
CCS-201ENST00000310190 ESYT1Q9BSJ8 1104 aa21.11■□□□□ 0.97
CCS-201ENST00000310190 PARP14Q460N5 1801 aa21.11■□□□□ 0.97
CCS-201ENST00000310190 TTLL1O95922 423 aa21.1■□□□□ 0.97
CCS-201ENST00000310190 TSPY3P0CV98 308 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms