RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 PAPD7Q5XG87 772 aaKnown RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 SPECC1LQ69YQ0 1117 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 ZNF771Q7L3S4 317 aaPredicted RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 GRAMD1CQ8IYS0 662 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 OXER1Q8TDS5 423 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 CALCOCO1Q9P1Z2 691 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 CEP126Q9P2H0 1117 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 SRPRBQ9Y5M8 271 aaKnown RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 A0A0U1RQG5 324 aaPredicted RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 VGLL3A8MV65 326 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 PDE2AO00408 941 aaPredicted RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 BIN1O00499 593 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 SEMA3EO15041 775 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 KLRC4O43908 158 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 LCA5LO95447 670 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 SFPQP23246 707 aaKnown RBP eCLIP6.23□□□□□ -1.41
VPS50-202ENST00000305866 ME1P48163 572 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 PLCB2Q00722 1185 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 RBL2Q08999 1139 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 PUM3Q15397 648 aaKnown RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 PIK3R5Q8WYR1 880 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 RBM33Q96EV2 1170 aaKnown RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 VIPAS39Q9H9C1 493 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 ABCB6Q9NP58 842 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 WDR81Q562E7 1941 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 ATP5J2-PTCD1G3V325 749 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 PSMD14O00487 310 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 GPAA1O43292 621 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 PTCD1O75127 700 aaKnown RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 CDKL5O76039 1030 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 ERCC5P28715 1186 aaPredicted RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 ZAP70P43403 619 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 PLCD1P51178 756 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 UBASH3AP57075 661 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 CORO7P57737 925 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 NAALADL2Q58DX5 795 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 C15orf52Q6ZUT6 534 aaKnown RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 AENQ8WTP8 325 aaKnown RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 ZNF592Q92610 1267 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 DNAJC7Q99615 494 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 BAG1Q99933 345 aaPredicted RBP6.23□□□□□ -1.41
VPS50-202ENST00000305866 DESI2Q9BSY9 194 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 PHF20Q9BVI0 1012 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.23□□□□□ -1.41
VPS50-202ENST00000305866 YY1AP1Q9H869 796 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 CNNM2Q9H8M5 875 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 PCDHB6Q9Y5E3 794 aa6.23□□□□□ -1.41
VPS50-202ENST00000305866 CAMTA2O94983 1202 aa6.22□□□□□ -1.41
VPS50-202ENST00000305866 NTSR2O95665 410 aa6.22□□□□□ -1.41
VPS50-202ENST00000305866 STARD3NLO95772 234 aa6.22□□□□□ -1.41
VPS50-202ENST00000305866 TRHP20396 242 aaPredicted RBP6.22□□□□□ -1.41
VPS50-202ENST00000305866 ACTN2P35609 894 aa6.22□□□□□ -1.41
VPS50-202ENST00000305866 SF3B3Q15393 1217 aaKnown RBP6.22□□□□□ -1.41
VPS50-202ENST00000305866 PARP10Q53GL7 1025 aa6.22□□□□□ -1.41
VPS50-202ENST00000305866 CLEC4GQ6UXB4 293 aa6.22□□□□□ -1.41
VPS50-202ENST00000305866 ADGRA1Q86SQ6 560 aa6.22□□□□□ -1.41
VPS50-202ENST00000305866 CDC23Q9UJX2 597 aa6.22□□□□□ -1.41
VPS50-202ENST00000305866 ATXN2Q99700 1313 aaKnown RBP6.22□□□□□ -1.41
VPS50-202ENST00000305866 KLF18A0A0U1RQI7 1052 aa6.22□□□□□ -1.41
VPS50-202ENST00000305866 MARCKSP29966 332 aaPredicted RBP6.22□□□□□ -1.41
VPS50-202ENST00000305866 C14orf37Q86TY3 774 aa6.22□□□□□ -1.41
VPS50-202ENST00000305866 NAT10Q9H0A0 1025 aaKnown RBP6.22□□□□□ -1.41
VPS50-202ENST00000305866 AATFQ9NY61 560 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS50-202ENST00000305866 KCNH3Q9ULD8 1083 aa6.22□□□□□ -1.41
VPS50-202ENST00000305866 HPCAL4Q9UM19 191 aa6.22□□□□□ -1.41
VPS50-202ENST00000305866 UBR3Q6ZT12 1888 aa6.22□□□□□ -1.41
VPS50-202ENST00000305866 GSG1L2A8MUP6 293 aa6.21□□□□□ -1.41
VPS50-202ENST00000305866 GOLGA6L19H0YKK7 550 aa6.21□□□□□ -1.41
VPS50-202ENST00000305866 PDE6AP16499 860 aa6.21□□□□□ -1.41
VPS50-202ENST00000305866 SYKP43405 635 aa6.21□□□□□ -1.41
VPS50-202ENST00000305866 IFIT5Q13325 482 aaKnown RBP6.21□□□□□ -1.41
VPS50-202ENST00000305866 ZSCAN26Q16670 478 aa6.21□□□□□ -1.41
VPS50-202ENST00000305866 CCDC57Q2TAC2 916 aa6.21□□□□□ -1.41
VPS50-202ENST00000305866 COBLL1Q53SF7 1204 aa6.21□□□□□ -1.41
VPS50-202ENST00000305866 CCDC73Q6ZRK6 1079 aa6.21□□□□□ -1.41
VPS50-202ENST00000305866 SYNE4Q8N205 404 aa6.21□□□□□ -1.41
VPS50-202ENST00000305866 PHKBQ93100 1093 aa6.21□□□□□ -1.41
VPS50-202ENST00000305866 DNAJC2Q99543 621 aaKnown RBP6.21□□□□□ -1.41
VPS50-202ENST00000305866 BRIP1Q9BX63 1249 aa6.21□□□□□ -1.41
VPS50-202ENST00000305866 ZSWIM5Q9P217 1185 aa6.21□□□□□ -1.41
VPS50-202ENST00000305866 ARID2Q68CP9 1835 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 MYBP10242 640 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 MMP14P50281 582 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 POSTNQ15063 836 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 ASTE1Q2TB18 679 aaPredicted RBP6.21□□□□□ -1.42
VPS50-202ENST00000305866 CCDC102BQ68D86 513 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 WWC2Q6AWC2 1192 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 FOXR2Q6PJQ5 311 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 NOSTRINQ8IVI9 506 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 SUGP1Q8IWZ8 645 aaKnown RBP6.21□□□□□ -1.42
VPS50-202ENST00000305866 TMTC2Q8N394 836 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 C8orf76Q96K31 380 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 EFCC1Q9HA90 598 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 PDE11AQ9HCR9 933 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 RAI14Q9P0K7 980 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 SERTAD1Q9UHV2 236 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 NAP1L2Q9ULW6 460 aaPredicted RBP6.21□□□□□ -1.42
VPS50-202ENST00000305866 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.21□□□□□ -1.42
VPS50-202ENST00000305866 FLT1P17948 1338 aa6.21□□□□□ -1.42
VPS50-202ENST00000305866 SPATA31A1Q5TZJ5 1347 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms