RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 CCDC51Q96ER9 411 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 CALML4Q96GE6 196 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 GSDMAQ96QA5 445 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 EPB41L4AQ9HCS5 686 aaPredicted RBP11.38□□□□□ -0.59
HMGCR-201ENST00000287936 BSDC1Q9NW68 430 aaPredicted RBP11.38□□□□□ -0.59
HMGCR-201ENST00000287936 STX8Q9UNK0 236 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 FGFR1OPO95684 399 aaKnown RBP11.38□□□□□ -0.59
HMGCR-201ENST00000287936 ATP1A3P13637 1013 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 PLCG2P16885 1265 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 GABPB1Q06547 395 aaPredicted RBP11.38□□□□□ -0.59
HMGCR-201ENST00000287936 TUBB2AQ13885 445 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 HEATR3Q7Z4Q2 680 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 KIAA1328Q86T90 577 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 CEP112Q8N8E3 955 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 GOLGA1Q92805 767 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 TRIM47Q96LD4 638 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 TUBB2BQ9BVA1 445 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 CTNND2Q9UQB3 1225 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 PCDHB6Q9Y5E3 794 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 RIC1Q4ADV7 1423 aa11.38□□□□□ -0.59
HMGCR-201ENST00000287936 ALS2Q96Q42 1657 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 TUBGCP6Q96RT7 1819 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 SCG2P13521 617 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 RFC4P35249 363 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 NGLY1Q96IV0 654 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 INCENPQ9NQS7 918 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 PPP2R2CQ9Y2T4 447 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 SLFN14P0C7P3 912 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 RGPD5Q99666 1765 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 TMX1Q9H3N1 280 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 MROH7-TTC4A0A0A0MT08 1334 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 PAK1Q13153 545 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 TAF3Q5VWG9 929 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 IQCEQ6IPM2 695 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 LZTS2Q9BRK4 669 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 C6orf50Q9HD87 102 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 ATRNO75882 1429 aa11.37□□□□□ -0.59
HMGCR-201ENST00000287936 PPP1R2P41236 205 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 ZNF827Q17R98 1081 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 SYMPKQ92797 1274 aaKnown RBP11.36□□□□□ -0.59
HMGCR-201ENST00000287936 EXOC1Q9NV70 894 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 HMGB2P26583 209 aaKnown RBP11.36□□□□□ -0.59
HMGCR-201ENST00000287936 KARSQ15046 597 aaKnown RBP11.36□□□□□ -0.59
HMGCR-201ENST00000287936 EHBP1Q8NDI1 1231 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 ANKRD7Q92527 254 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 BMP2KQ9NSY1 1161 aaPredicted RBP11.36□□□□□ -0.59
HMGCR-201ENST00000287936 TTF2Q9UNY4 1162 aaKnown RBP11.36□□□□□ -0.59
HMGCR-201ENST00000287936 hCG_1642624A0A1W2PR95 340 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 GNA11P29992 359 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 NAPAP54920 295 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 PTPAQ15257 358 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 ERFEQ4G0M1 354 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 MEX3CQ5U5Q3 659 aaKnown RBP11.36□□□□□ -0.59
HMGCR-201ENST00000287936 VGLL2Q8N8G2 317 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 TFCP2L1Q9NZI6 479 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 HPSEQ9Y251 543 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 BCL9O00512 1426 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 USP27XA6NNY8 438 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 SNAP23O00161 211 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 GTPBP6O43824 516 aaPredicted RBP11.36□□□□□ -0.59
HMGCR-201ENST00000287936 DYNLL1P63167 89 aaKnown RBP11.36□□□□□ -0.59
HMGCR-201ENST00000287936 METTL16Q86W50 562 aaKnown RBP11.36□□□□□ -0.59
HMGCR-201ENST00000287936 LRRC27Q9C0I9 530 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 ARFGAP3Q9NP61 516 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 LAMB4A4D0S4 1761 aa11.36□□□□□ -0.59
HMGCR-201ENST00000287936 TCRBV5S4A2TA0A5A2 114 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 CTAGE9A4FU28 777 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 MCM3P25205 808 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 MTIF2P46199 727 aaKnown RBP11.35□□□□□ -0.59
HMGCR-201ENST00000287936 PIP4K2BP78356 416 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 PPP2R3AQ06190 1150 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 SLC4A8Q2Y0W8 1093 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 ARMCX5Q6P1M9 558 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 TMTC1Q8IUR5 882 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 CARD6Q9BX69 1037 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 LUC7LQ9NQ29 371 aaKnown RBP11.35□□□□□ -0.59
HMGCR-201ENST00000287936 FBXO2Q9UK22 296 aaPredicted RBP11.35□□□□□ -0.59
HMGCR-201ENST00000287936 BICDL2A1A5D9 508 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 GNPATO15228 680 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 RAD21O60216 631 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 FAM47AQ5JRC9 791 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 GALNT17Q6IS24 598 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 BLIDQ8IZY5 108 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 DEF6Q9H4E7 631 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 SENP2Q9HC62 589 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 CAMTA2O94983 1202 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 NOC3LQ8WTT2 800 aaKnown RBP11.35□□□□□ -0.59
HMGCR-201ENST00000287936 RRP36Q96EU6 259 aaKnown RBP11.35□□□□□ -0.59
HMGCR-201ENST00000287936 KCPQ6ZWJ8 1503 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 LONP1P36776 959 aaKnown RBP11.35□□□□□ -0.59
HMGCR-201ENST00000287936 ADKP55263 362 aaKnown RBP11.35□□□□□ -0.59
HMGCR-201ENST00000287936 TFAP4Q01664 338 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 PTGDRQ13258 359 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 SPA17Q15506 151 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 NYAP1Q6ZVC0 841 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 TMTC3Q6ZXV5 915 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 TSG101Q99816 390 aa11.35□□□□□ -0.59
HMGCR-201ENST00000287936 CYLC1P35663 651 aaPredicted RBP11.34□□□□□ -0.59
HMGCR-201ENST00000287936 UBXN1Q04323 297 aa11.34□□□□□ -0.59
HMGCR-201ENST00000287936 NTRK3Q16288 839 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms