RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 MAP3K12Q12852 859 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 DPYDQ12882 1025 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 FANCBQ8NB91 859 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 ACRBPQ8NEB7 543 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 CNNM2Q9H8M5 875 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 SUGCTQ9HAC7 445 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 BAZ2BQ9UIF8 2168 aaKnown RBP19.4■□□□□ 0.7
SPG7-201ENST00000268704 COL5A2P05997 1499 aaPredicted RBP19.4■□□□□ 0.7
SPG7-201ENST00000268704 UQCRFS1P1P0C7P4 283 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 CDC25AP30304 524 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 ZNF569Q5MCW4 686 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 PPFIBP1Q86W92 1011 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 CREBRFQ8IUR6 639 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 LPIN2Q92539 896 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 SYMPKQ92797 1274 aaKnown RBP19.4■□□□□ 0.7
SPG7-201ENST00000268704 CDC5LQ99459 802 aaKnown RBP19.4■□□□□ 0.7
SPG7-201ENST00000268704 FXR1P51114 621 aaKnown RBP eCLIP19.4■□□□□ 0.7
SPG7-201ENST00000268704 FAM193AP78312 1265 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 TRIML1Q8N9V2 468 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 SDR42E1Q8WUS8 393 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 PNKPQ96T60 521 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 TRIM34Q9BYJ4 488 aa19.4■□□□□ 0.7
SPG7-201ENST00000268704 ERICH2A1L162 156 aa19.39■□□□□ 0.69
SPG7-201ENST00000268704 CAPN2P17655 700 aa19.39■□□□□ 0.69
SPG7-201ENST00000268704 SART3Q15020 963 aaKnown RBP19.39■□□□□ 0.69
SPG7-201ENST00000268704 WWC2Q6AWC2 1192 aa19.39■□□□□ 0.69
SPG7-201ENST00000268704 ZNF579Q8NAF0 562 aaKnown RBP19.39■□□□□ 0.69
SPG7-201ENST00000268704 PAGE5Q96GU1 130 aa19.39■□□□□ 0.69
SPG7-201ENST00000268704 ANKZF1Q9H8Y5 726 aa19.39■□□□□ 0.69
SPG7-201ENST00000268704 ADD3Q9UEY8 706 aaKnown RBP19.39■□□□□ 0.69
SPG7-201ENST00000268704 ZBTB1Q9Y2K1 713 aa19.39■□□□□ 0.69
SPG7-201ENST00000268704 MINDY4BA8MYZ0 360 aa19.39■□□□□ 0.69
SPG7-201ENST00000268704 FGFR2P21802 821 aa19.39■□□□□ 0.69
SPG7-201ENST00000268704 BCAMP50895 628 aa19.39■□□□□ 0.69
SPG7-201ENST00000268704 CUL4BQ13620 913 aa19.39■□□□□ 0.69
SPG7-201ENST00000268704 PANX2Q96RD6 677 aa19.39■□□□□ 0.69
SPG7-201ENST00000268704 ERCC5P28715 1186 aaPredicted RBP19.38■□□□□ 0.69
SPG7-201ENST00000268704 MCM6Q14566 821 aa19.38■□□□□ 0.69
SPG7-201ENST00000268704 SPATA1Q5VX52 437 aa19.38■□□□□ 0.69
SPG7-201ENST00000268704 IPO4Q8TEX9 1081 aaKnown RBP19.38■□□□□ 0.69
SPG7-201ENST00000268704 STAG1Q8WVM7 1258 aa19.38■□□□□ 0.69
SPG7-201ENST00000268704 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.38■□□□□ 0.69
SPG7-201ENST00000268704 ATP8B1O43520 1251 aa19.38■□□□□ 0.69
SPG7-201ENST00000268704 STARD3NLO95772 234 aa19.38■□□□□ 0.69
SPG7-201ENST00000268704 GYPCP04921 128 aa19.38■□□□□ 0.69
SPG7-201ENST00000268704 SLC4A9Q96Q91 983 aa19.38■□□□□ 0.69
SPG7-201ENST00000268704 BLZF1Q9H2G9 400 aa19.38■□□□□ 0.69
SPG7-201ENST00000268704 CTNND2Q9UQB3 1225 aa19.38■□□□□ 0.69
SPG7-201ENST00000268704 RNF225M0QZC1 329 aaPredicted RBP19.38■□□□□ 0.69
SPG7-201ENST00000268704 MFAP3LO75121 409 aa19.38■□□□□ 0.69
SPG7-201ENST00000268704 SRGAP1Q7Z6B7 1085 aa19.38■□□□□ 0.69
SPG7-201ENST00000268704 ADGRA1Q86SQ6 560 aa19.38■□□□□ 0.69
SPG7-201ENST00000268704 TRIM75PA6NK02 468 aa19.37■□□□□ 0.69
SPG7-201ENST00000268704 PDE8AO60658 829 aa19.37■□□□□ 0.69
SPG7-201ENST00000268704 PBX1P40424 430 aa19.37■□□□□ 0.69
SPG7-201ENST00000268704 ZNF174Q15697 407 aa19.37■□□□□ 0.69
SPG7-201ENST00000268704 UBAC1Q9BSL1 405 aa19.37■□□□□ 0.69
SPG7-201ENST00000268704 TIAM2Q8IVF5 1701 aa19.37■□□□□ 0.69
SPG7-201ENST00000268704 KIF5CO60282 957 aa19.37■□□□□ 0.69
SPG7-201ENST00000268704 RHOXF2BP0C7M4 288 aa19.37■□□□□ 0.69
SPG7-201ENST00000268704 KANK3Q6NY19 840 aa19.37■□□□□ 0.69
SPG7-201ENST00000268704 SLC35F6Q8N357 371 aa19.37■□□□□ 0.69
SPG7-201ENST00000268704 RHOXF2Q9BQY4 288 aa19.37■□□□□ 0.69
SPG7-201ENST00000268704 CEP131Q9UPN4 1083 aa19.37■□□□□ 0.69
SPG7-201ENST00000268704 TNKSO95271 1327 aa19.37■□□□□ 0.69
SPG7-201ENST00000268704 LTBP4Q8N2S1 1624 aa19.37■□□□□ 0.69
SPG7-201ENST00000268704 NID2Q14112 1375 aa19.37■□□□□ 0.69
SPG7-201ENST00000268704 PLEKHA8P1O95397 391 aa19.36■□□□□ 0.69
SPG7-201ENST00000268704 KIF4BQ2VIQ3 1234 aa19.36■□□□□ 0.69
SPG7-201ENST00000268704 CDKAL1Q5VV42 579 aa19.36■□□□□ 0.69
SPG7-201ENST00000268704 PAXIP1Q6ZW49 1069 aaPredicted RBP19.36■□□□□ 0.69
SPG7-201ENST00000268704 CYP2D7A0A087X1C5 515 aa19.36■□□□□ 0.69
SPG7-201ENST00000268704 PPP1R3GB7ZBB8 358 aa19.36■□□□□ 0.69
SPG7-201ENST00000268704 RAD51AP2Q09MP3 1159 aa19.36■□□□□ 0.69
SPG7-201ENST00000268704 PKN1Q16512 942 aa19.36■□□□□ 0.69
SPG7-201ENST00000268704 PDE11AQ9HCR9 933 aa19.36■□□□□ 0.69
SPG7-201ENST00000268704 CCDC151A5D8V7 595 aa19.36■□□□□ 0.69
SPG7-201ENST00000268704 N4BP1O75113 896 aaKnown RBP19.36■□□□□ 0.69
SPG7-201ENST00000268704 SLC5A1P13866 664 aa19.36■□□□□ 0.69
SPG7-201ENST00000268704 NACAP1Q9BZK3 213 aa19.36■□□□□ 0.69
SPG7-201ENST00000268704 AATFQ9NY61 560 aaKnown RBP eCLIP19.36■□□□□ 0.69
SPG7-201ENST00000268704 CDC23Q9UJX2 597 aa19.36■□□□□ 0.69
SPG7-201ENST00000268704 DOCK2Q92608 1830 aa19.35■□□□□ 0.69
SPG7-201ENST00000268704 ERVK-24P63145 666 aa19.35■□□□□ 0.69
SPG7-201ENST00000268704 PPARAQ07869 468 aa19.35■□□□□ 0.69
SPG7-201ENST00000268704 ADAM21Q9UKJ8 722 aa19.35■□□□□ 0.69
SPG7-201ENST00000268704 MYH2Q9UKX2 1941 aa19.35■□□□□ 0.69
SPG7-201ENST00000268704 LMAN1P49257 510 aa19.35■□□□□ 0.69
SPG7-201ENST00000268704 CADPS2Q86UW7 1296 aa19.35■□□□□ 0.69
SPG7-201ENST00000268704 CARD10Q9BWT7 1032 aa19.35■□□□□ 0.69
SPG7-201ENST00000268704 VPS16Q9H269 839 aa19.35■□□□□ 0.69
SPG7-201ENST00000268704 V9GY48 417 aaPredicted RBP19.35■□□□□ 0.69
SPG7-201ENST00000268704 CCDC196A0A1B0GTZ2 297 aa19.34■□□□□ 0.69
SPG7-201ENST00000268704 TXLNBQ8N3L3 684 aa19.34■□□□□ 0.69
SPG7-201ENST00000268704 LRP2BPQ9P2M1 347 aa19.34■□□□□ 0.69
SPG7-201ENST00000268704 MAPK8IP1Q9UQF2 711 aa19.34■□□□□ 0.69
SPG7-201ENST00000268704 EVA1CP58658 441 aa19.34■□□□□ 0.69
SPG7-201ENST00000268704 RASGRP2Q7LDG7 609 aa19.34■□□□□ 0.69
SPG7-201ENST00000268704 SH3RF1Q7Z6J0 888 aa19.34■□□□□ 0.69
SPG7-201ENST00000268704 SLIT2O94813 1529 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms