RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 B4E1Z4 1266 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 ABL1P00519 1130 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 SHC4Q6S5L8 630 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 PHKBQ93100 1093 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 TMEM60Q9H2L4 133 aa6.86□□□□□ -1.31
TOPBP1-201ENST00000260810 U2AF2P26368 475 aaKnown RBP eCLIP6.85□□□□□ -1.312e-14■■■■■ 45.6
TOPBP1-201ENST00000260810 CNBD1Q8NA66 436 aa6.85□□□□□ -1.31
TOPBP1-201ENST00000260810 CLEC4DQ8WXI8 215 aa6.85□□□□□ -1.31
TOPBP1-201ENST00000260810 FRMPD4Q14CM0 1322 aa6.85□□□□□ -1.31
TOPBP1-201ENST00000260810 IGLV3-22A0A075B6J6 115 aa6.85□□□□□ -1.31
TOPBP1-201ENST00000260810 PPEF1O14829 653 aaPredicted RBP6.85□□□□□ -1.31
TOPBP1-201ENST00000260810 PDE4BQ07343 736 aa6.85□□□□□ -1.31
TOPBP1-201ENST00000260810 FAM47AQ5JRC9 791 aa6.85□□□□□ -1.31
TOPBP1-201ENST00000260810 MTFR1LQ9H019 292 aa6.85□□□□□ -1.31
TOPBP1-201ENST00000260810 KAT6AQ92794 2004 aa6.85□□□□□ -1.31
TOPBP1-201ENST00000260810 ECE2O60344 883 aa6.85□□□□□ -1.31
TOPBP1-201ENST00000260810 CASP1P29466 404 aa6.85□□□□□ -1.31
TOPBP1-201ENST00000260810 MNX1P50219 401 aaPredicted RBP6.85□□□□□ -1.31
TOPBP1-201ENST00000260810 USP17L12C9JPN9 530 aa6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 USP17L21D6R901 530 aa6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 DHX15O43143 795 aaKnown RBP6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 PFKFB2O60825 505 aa6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 CDC45O75419 566 aa6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 SP2Q02086 613 aa6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 IL31RAQ8NI17 732 aa6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 CLMNQ96JQ2 1002 aa6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 SETDB2Q96T68 719 aa6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 PCDHA2Q9Y5H9 948 aa6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 ZBTB42B2RXF5 422 aa6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 MRIQ9BWK5 157 aa6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 RBM27Q9P2N5 1060 aaKnown RBP6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 XDHP47989 1333 aa6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 KIF3CO14782 793 aa6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 CEP95Q96GE4 821 aa6.84□□□□□ -1.31
TOPBP1-201ENST00000260810 ZBTB39O15060 712 aa6.84□□□□□ -1.32
TOPBP1-201ENST00000260810 ERC2O15083 957 aa6.84□□□□□ -1.32
TOPBP1-201ENST00000260810 CYP3A4P08684 503 aa6.84□□□□□ -1.32
TOPBP1-201ENST00000260810 NBPF5PQ86XG9 351 aaPredicted RBP6.84□□□□□ -1.32
TOPBP1-201ENST00000260810 MMP14P50281 582 aa6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 TDRD3Q9H7E2 651 aaKnown RBP6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 DDNO94850 711 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 ZSWIM2Q8NEG5 633 aa6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 EMILIN3Q9NT22 766 aa6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 KIF26AQ9ULI4 1882 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 GPNMBQ14956 572 aa6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 Q6ZUG5 572 aa6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 SH3RF1Q7Z6J0 888 aa6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 MASTLQ96GX5 879 aa6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 DEFB129Q9H1M3 183 aa6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 PFASO15067 1338 aa6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 INPP5BP32019 993 aa6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 FBXO28Q9NVF7 368 aa6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 CLIC4Q9Y696 253 aa6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 SNCAIPQ9Y6H5 919 aa6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 HRNRQ86YZ3 2850 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-201ENST00000260810 TTLL13PA6NNM8 815 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 SLC5A1P13866 664 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 CD44P16070 742 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 ATP4AP20648 1035 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 PHF20Q9BVI0 1012 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 ZNF330Q9Y3S2 320 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 COL4A2P08572 1712 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 PATL2C9JE40 543 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 EPB41L2O43491 1005 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 PDHBP11177 359 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 Q3C1V9 767 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 NBPF12Q5TAG4 269 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 TMEM139Q8IV31 216 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 MKL1Q969V6 931 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 MBOAT7Q96N66 472 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 OSBPL5Q9H0X9 879 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 RIOX1Q9H6W3 641 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 HELLSQ9NRZ9 838 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 C2orf16Q68DN1 1984 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 KLRC4O43908 158 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 USP2O75604 605 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 SPDYE2Q495Y8 402 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 ZNF579Q8NAF0 562 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 L3MBTL3Q96JM7 780 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 ORC4O43929 436 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 NPR1P16066 1061 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 PLXNA3P51805 1871 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 TRAF5O00463 557 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 MAP3K12Q12852 859 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 USP48Q86UV5 1035 aa6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 KHSRPQ92945 711 aaKnown RBP eCLIP6.82□□□□□ -1.321e-6■■■■□ 23.4
TOPBP1-201ENST00000260810 ZNF214Q9UL59 606 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-201ENST00000260810 BAG4O95429 457 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 ANAPC15P60006 121 aa6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 SPRYD3Q8NCJ5 442 aa6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 TDRD15B5MCY1 1934 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 RFC4P35249 363 aa6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 GTF2IP78347 998 aa6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 ANKRD18BA2A2Z9 1011 aa6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 RAD17O75943 681 aa6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 SARSP49591 514 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 PMS1P54277 932 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 FKBP4Q02790 459 aaKnown RBP eCLIP6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 CCDC125Q86Z20 511 aa6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 USP28Q96RU2 1077 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms