RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 PHF24Q9UPV7 400 aa18.15■□□□□ 0.5
RABEPK-201ENST00000259460 YBX2Q9Y2T7 364 aaKnown RBP18.15■□□□□ 0.5
RABEPK-201ENST00000259460 IVNS1ABPQ9Y6Y0 642 aa18.15■□□□□ 0.5
RABEPK-201ENST00000259460 CCNA1P78396 465 aa18.14■□□□□ 0.49
RABEPK-201ENST00000259460 PUM3Q15397 648 aaKnown RBP18.14■□□□□ 0.49
RABEPK-201ENST00000259460 CNMDO75829 334 aa18.13■□□□□ 0.49
RABEPK-201ENST00000259460 FAAP100Q0VG06 881 aa18.13■□□□□ 0.49
RABEPK-201ENST00000259460 BEND3Q5T5X7 828 aa18.13■□□□□ 0.49
RABEPK-201ENST00000259460 C16orf59Q7L2K0 433 aa18.13■□□□□ 0.49
RABEPK-201ENST00000259460 TSR2Q969E8 191 aaKnown RBP18.13■□□□□ 0.49
RABEPK-201ENST00000259460 WDR18Q9BV38 432 aa18.13■□□□□ 0.49
RABEPK-201ENST00000259460 CD320Q9NPF0 282 aa18.13■□□□□ 0.49
RABEPK-201ENST00000259460 COG5Q9UP83 839 aa18.13■□□□□ 0.49
RABEPK-201ENST00000259460 CACNA1FO60840 1977 aa18.12■□□□□ 0.49
RABEPK-201ENST00000259460 F6X3S4 739 aa18.12■□□□□ 0.49
RABEPK-201ENST00000259460 TIMP1P01033 207 aa18.12■□□□□ 0.49
RABEPK-201ENST00000259460 IGHA2P01877 340 aa18.12■□□□□ 0.49
RABEPK-201ENST00000259460 PPP2R2DQ66LE6 453 aa18.12■□□□□ 0.49
RABEPK-201ENST00000259460 MFSD5Q6N075 450 aa18.12■□□□□ 0.49
RABEPK-201ENST00000259460 PSRC1Q6PGN9 363 aaPredicted RBP18.12■□□□□ 0.49
RABEPK-201ENST00000259460 SIPA1L1O43166 1804 aa18.12■□□□□ 0.49
RABEPK-201ENST00000259460 PRRC2BQ5JSZ5 2229 aaKnown RBP18.11■□□□□ 0.49
RABEPK-201ENST00000259460 A0A1W2PQ45 241 aaPredicted RBP18.11■□□□□ 0.49
RABEPK-201ENST00000259460 A0A1W2PQY0 241 aa18.11■□□□□ 0.49
RABEPK-201ENST00000259460 APBB1O00213 710 aa18.11■□□□□ 0.49
RABEPK-201ENST00000259460 ACRP10323 421 aa18.11■□□□□ 0.49
RABEPK-201ENST00000259460 FGFR2P21802 821 aa18.11■□□□□ 0.49
RABEPK-201ENST00000259460 BTDP43251 543 aa18.11■□□□□ 0.49
RABEPK-201ENST00000259460 CSPP1Q1MSJ5 1256 aa18.11■□□□□ 0.49
RABEPK-201ENST00000259460 TWISTNBQ3B726 338 aaPredicted RBP18.11■□□□□ 0.49
RABEPK-201ENST00000259460 FAM9BQ8IZU0 186 aa18.11■□□□□ 0.49
RABEPK-201ENST00000259460 SUCLG2Q96I99 432 aa18.11■□□□□ 0.49
RABEPK-201ENST00000259460 C9orf78Q9NZ63 289 aaPredicted RBP18.11■□□□□ 0.49
RABEPK-201ENST00000259460 RABGAP1Q9Y3P9 1069 aa18.11■□□□□ 0.49
RABEPK-201ENST00000259460 USP34Q70CQ2 3546 aa18.11■□□□□ 0.49
RABEPK-201ENST00000259460 DCDC2CA8MYV0 355 aa18.1■□□□□ 0.49
RABEPK-201ENST00000259460 ZNF365Q70YC5 407 aa18.1■□□□□ 0.49
RABEPK-201ENST00000259460 SALL1Q9NSC2 1324 aa18.09■□□□□ 0.49
RABEPK-201ENST00000259460 C19orf81C9J6K1 198 aa18.09■□□□□ 0.49
RABEPK-201ENST00000259460 GTPBP6O43824 516 aaPredicted RBP18.09■□□□□ 0.49
RABEPK-201ENST00000259460 SLC5A1P13866 664 aa18.09■□□□□ 0.49
RABEPK-201ENST00000259460 CSF2RAP15509 400 aa18.09■□□□□ 0.49
RABEPK-201ENST00000259460 PRAMEF19Q5SWL8 479 aa18.09■□□□□ 0.49
RABEPK-201ENST00000259460 OLFML2BQ68BL8 750 aa18.09■□□□□ 0.49
RABEPK-201ENST00000259460 ANKRD33Q7Z3H0 272 aa18.09■□□□□ 0.49
RABEPK-201ENST00000259460 DPP9Q86TI2 863 aa18.09■□□□□ 0.49
RABEPK-201ENST00000259460 DZIP1Q86YF9 867 aaKnown RBP18.09■□□□□ 0.49
RABEPK-201ENST00000259460 KCNH6Q9H252 994 aa18.09■□□□□ 0.49
RABEPK-201ENST00000259460 XPNPEP3Q9NQH7 507 aa18.09■□□□□ 0.49
RABEPK-201ENST00000259460 TBX21Q9UL17 535 aa18.09■□□□□ 0.49
RABEPK-201ENST00000259460 MTCH2Q9Y6C9 303 aa18.09■□□□□ 0.49
RABEPK-201ENST00000259460 CFAP54Q96N23 3096 aa18.09■□□□□ 0.49
RABEPK-201ENST00000259460 ZNF521Q96K83 1311 aa18.08■□□□□ 0.49
RABEPK-201ENST00000259460 USP17L10C9JJH3 530 aa18.08■□□□□ 0.49
RABEPK-201ENST00000259460 ASNSP08243 561 aa18.07■□□□□ 0.48
RABEPK-201ENST00000259460 FOXK2Q01167 660 aa18.07■□□□□ 0.48
RABEPK-201ENST00000259460 RNF180Q86T96 592 aa18.07■□□□□ 0.48
RABEPK-201ENST00000259460 KLHDC4Q8TBB5 520 aa18.07■□□□□ 0.48
RABEPK-201ENST00000259460 HLA-CQ95604 372 aa18.07■□□□□ 0.48
RABEPK-201ENST00000259460 KAZALD1Q96I82 304 aa18.07■□□□□ 0.48
RABEPK-201ENST00000259460 TOX2Q96NM4 488 aa18.07■□□□□ 0.48
RABEPK-201ENST00000259460 PHOX2BQ99453 314 aa18.07■□□□□ 0.48
RABEPK-201ENST00000259460 MTIF3Q9H2K0 278 aaKnown RBP18.07■□□□□ 0.48
RABEPK-201ENST00000259460 RFXAPO00287 272 aa18.06■□□□□ 0.48
RABEPK-201ENST00000259460 APAF1O14727 1248 aa18.06■□□□□ 0.48
RABEPK-201ENST00000259460 ST18O60284 1047 aa18.06■□□□□ 0.48
RABEPK-201ENST00000259460 PGK1P00558 417 aa18.06■□□□□ 0.48
RABEPK-201ENST00000259460 RARBP10826 455 aa18.06■□□□□ 0.48
RABEPK-201ENST00000259460 ADORA2AP29274 412 aa18.06■□□□□ 0.48
RABEPK-201ENST00000259460 RABGGTBP53611 331 aa18.06■□□□□ 0.48
RABEPK-201ENST00000259460 TMEM199Q8N511 208 aa18.06■□□□□ 0.48
RABEPK-201ENST00000259460 MROH7-TTC4A0A0A0MT08 1334 aa18.06■□□□□ 0.48
RABEPK-201ENST00000259460 CCER2I3L3R5 266 aa18.05■□□□□ 0.48
RABEPK-201ENST00000259460 MYOGP15173 224 aa18.05■□□□□ 0.48
RABEPK-201ENST00000259460 JAG1P78504 1218 aa18.05■□□□□ 0.48
RABEPK-201ENST00000259460 SHROOM1Q2M3G4 852 aaPredicted RBP18.05■□□□□ 0.48
RABEPK-201ENST00000259460 KRT40Q6A162 431 aa18.05■□□□□ 0.48
RABEPK-201ENST00000259460 LPIN2Q92539 896 aa18.05■□□□□ 0.48
RABEPK-201ENST00000259460 PPP1R12CQ9BZL4 782 aa18.05■□□□□ 0.48
RABEPK-201ENST00000259460 STARD7Q9NQZ5 370 aa18.05■□□□□ 0.48
RABEPK-201ENST00000259460 EMILIN3Q9NT22 766 aa18.05■□□□□ 0.48
RABEPK-201ENST00000259460 BTBD7Q9P203 1132 aa18.05■□□□□ 0.48
RABEPK-201ENST00000259460 COL4A4P53420 1690 aaPredicted RBP18.05■□□□□ 0.48
RABEPK-201ENST00000259460 SMCHD1A6NHR9 2005 aa18.04■□□□□ 0.48
RABEPK-201ENST00000259460 RHBDL3P58872 404 aa18.04■□□□□ 0.48
RABEPK-201ENST00000259460 SLF2Q8IX21 1173 aa18.04■□□□□ 0.48
RABEPK-201ENST00000259460 BICC1Q9H694 974 aaKnown RBP18.04■□□□□ 0.48
RABEPK-201ENST00000259460 HERC5Q9UII4 1024 aaKnown RBP18.04■□□□□ 0.48
RABEPK-201ENST00000259460 ZDBF2Q9HCK1 2354 aa18.04■□□□□ 0.48
RABEPK-201ENST00000259460 ZNF318Q5VUA4 2279 aa18.03■□□□□ 0.48
RABEPK-201ENST00000259460 ZYXQ15942 572 aaKnown RBP18.03■□□□□ 0.48
RABEPK-201ENST00000259460 USP17L2Q6R6M4 530 aa18.03■□□□□ 0.48
RABEPK-201ENST00000259460 MIER1Q8N108 512 aa18.03■□□□□ 0.48
RABEPK-201ENST00000259460 ZGPATQ8N5A5 531 aaKnown RBP18.03■□□□□ 0.48
RABEPK-201ENST00000259460 GNL3LQ9NVN8 582 aaKnown RBP18.03■□□□□ 0.48
RABEPK-201ENST00000259460 DENND2AQ9ULE3 1009 aa18.03■□□□□ 0.48
RABEPK-201ENST00000259460 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.48
RABEPK-201ENST00000259460 GDF11O95390 407 aa18.02■□□□□ 0.48
RABEPK-201ENST00000259460 POU3F3P20264 500 aaPredicted RBP18.02■□□□□ 0.48
RABEPK-201ENST00000259460 GJD3Q8N144 294 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms