RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 TMTC3Q6ZXV5 915 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 TRMT10CQ7L0Y3 403 aaKnown RBP9.53□□□□□ -0.88
USP6-201ENST00000250066 MAP7D3Q8IWC1 876 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 PGBD1Q96JS3 809 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 IRAK4Q9NWZ3 460 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 VWA3AA6NCI4 1184 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 H0YC42 278 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 H3BRJ5 948 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 THAP12O43422 761 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 ELF2Q15723 593 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 SPOUT1Q5T280 376 aaKnown RBP9.53□□□□□ -0.88
USP6-201ENST00000250066 TRIM59Q8IWR1 403 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 PARD3BQ8TEW8 1205 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 TYW1Q9NV66 732 aaKnown RBP9.53□□□□□ -0.88
USP6-201ENST00000250066 DBF4Q9UBU7 674 aaPredicted RBP9.53□□□□□ -0.88
USP6-201ENST00000250066 POLE2P56282 527 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 ITKQ08881 620 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 RAPH1Q70E73 1250 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 TRIM42Q8IWZ5 723 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 LRRC8CQ8TDW0 803 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 ZC3H12BQ5HYM0 836 aaKnown RBP9.53□□□□□ -0.88
USP6-201ENST00000250066 TRIM50Q86XT4 487 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 TEKT1Q969V4 418 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 FAM95CA0A1B0GW59 222 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 NOP56O00567 594 aaKnown RBP9.53□□□□□ -0.88
USP6-201ENST00000250066 DEUP1Q05D60 604 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 RCN2Q14257 317 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 PPP2R5EQ16537 467 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 BMP2KLQ5H9B9 411 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 MED4Q9NPJ6 270 aa9.53□□□□□ -0.88
USP6-201ENST00000250066 SYNJ1O43426 1573 aa9.52□□□□□ -0.88
USP6-201ENST00000250066 FBXW4P57775 412 aa9.52□□□□□ -0.88
USP6-201ENST00000250066 SMYD2Q9NRG4 433 aa9.52□□□□□ -0.88
USP6-201ENST00000250066 SUN1O94901 812 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 SLC4A1P02730 911 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 P4HA1P13674 534 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 GARSP41250 739 aaKnown RBP9.52□□□□□ -0.89
USP6-201ENST00000250066 CCDC152Q4G0S7 254 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 BRAPQ7Z569 592 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 KIFC3Q9BVG8 833 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 DNMBPQ6XZF7 1577 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 F6X3S4 739 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 F8W031 263 aaPredicted RBP9.52□□□□□ -0.89
USP6-201ENST00000250066 CCDC85BQ15834 202 aaPredicted RBP9.52□□□□□ -0.89
USP6-201ENST00000250066 SYCE1LA8MT33 242 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 SLC12A1Q13621 1099 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 SND1Q7KZF4 910 aaKnown RBP eCLIP9.52□□□□□ -0.89
USP6-201ENST00000250066 RAB44Q7Z6P3 723 aaPredicted RBP9.52□□□□□ -0.89
USP6-201ENST00000250066 DDX42Q86XP3 938 aaKnown RBP eCLIP9.52□□□□□ -0.89
USP6-201ENST00000250066 F13A1P00488 732 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 RFC4P35249 363 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 GUCY2FP51841 1108 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 MCMDC2Q4G0Z9 681 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 ZFYVE1Q9HBF4 777 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 MAP3K2Q9Y2U5 619 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 C11orf95C9JLR9 678 aaPredicted RBP9.52□□□□□ -0.89
USP6-201ENST00000250066 EEF1GP26641 437 aaKnown RBP9.52□□□□□ -0.89
USP6-201ENST00000250066 PLCD1P51178 756 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 OCA2Q04671 838 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 GJC2Q5T442 439 aaPredicted RBP9.52□□□□□ -0.89
USP6-201ENST00000250066 HOMEZQ8IX15 550 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 KCNH5Q8NCM2 988 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 RMDN2Q96LZ7 410 aa9.52□□□□□ -0.89
USP6-201ENST00000250066 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.52□□□□□ -0.89
USP6-201ENST00000250066 KRT8P05787 483 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 ATP1A2P50993 1020 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 STX1BP61266 288 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 GLE1Q53GS7 698 aaKnown RBP9.51□□□□□ -0.89
USP6-201ENST00000250066 ZNF449Q6P9G9 518 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 HACE1Q8IYU2 909 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 DACH2Q96NX9 599 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 RTEL1-TNFRSF6BF6WH68 1400 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 CFAP65Q6ZU64 1925 aaKnown RBP9.51□□□□□ -0.89
USP6-201ENST00000250066 ATXN8OSP0DMR3 200 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 CD19P15391 556 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 ARHGAP44Q17R89 818 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 RNF207Q6ZRF8 634 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 KSR1Q8IVT5 923 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 TEX9Q8N6V9 391 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 FBXL13Q8NEE6 735 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 SSH1Q8WYL5 1049 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 POLE3Q9NRF9 147 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 MYO1AQ9UBC5 1043 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 SYNRGQ9UMZ2 1314 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 PRPF6O94906 941 aaKnown RBP9.51□□□□□ -0.89
USP6-201ENST00000250066 LIG3P49916 1009 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 PDE4DQ08499 809 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 CCDC92Q53HC0 331 aaPredicted RBP9.51□□□□□ -0.89
USP6-201ENST00000250066 CSGALNACT2Q8N6G5 542 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 GRK7Q8WTQ7 553 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 NFKBIL1Q9UBC1 381 aaPredicted RBP9.51□□□□□ -0.89
USP6-201ENST00000250066 AMFRQ9UKV5 643 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 CAPN9O14815 690 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 ATP6V1E2Q96A05 226 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 TRIM8Q9BZR9 551 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 CCNT1O60563 726 aaKnown RBP9.51□□□□□ -0.89
USP6-201ENST00000250066 KRT19P08727 400 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 HAUS3Q68CZ6 603 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 ANO3Q9BYT9 981 aa9.51□□□□□ -0.89
USP6-201ENST00000250066 ADCY8P40145 1251 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms