RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Tulp1Q9Z273 543 aa17.68■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Gxylt1Q3UHH8 404 aa17.67■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Armc2Q3URY6 854 aa17.67■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Cyp4x1Q6A152 507 aa17.67■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Epha10Q8BYG9 1007 aa17.67■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Tor1aip2Q8BYU6 502 aa17.67■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Ppm1fQ8CGA0 452 aa17.67■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Nop2Q922K7 793 aaKnown RBP17.67■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Ndufb9Q9CQJ8 179 aa17.67■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Myo1bP46735 1107 aa17.67■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Nap1l2P51860 460 aa17.67■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Psmd1Q3TXS7 953 aa17.67■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Mars2Q499X9 586 aaKnown RBP17.67■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Nsrp1Q5NCR9 542 aa17.67■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Atxn7Q8R4I1 867 aa17.67■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Lzts2Q91YU6 671 aa17.67■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Gm43638A0A0J9YU36 694 aa17.66■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Kansl3A2RSY1 903 aaKnown RBP17.66■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Slc27a3O88561 667 aa17.66■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Irx3P81067 507 aa17.66■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Dpf2Q61103 391 aaKnown RBP17.66■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Glra4Q61603 456 aa17.66■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Lca5Q80ST9 704 aa17.66■□□□□ 0.42
Ldb3-208ENSMUST00000228044 IqcgQ80W32 419 aa17.66■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Dnaaf2Q8BPI1 814 aa17.66■□□□□ 0.42
Ldb3-208ENSMUST00000228044 PaoxQ8C0L6 504 aa17.66■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Spire2Q8K1S6 718 aa17.66■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Rbm19Q8R3C6 952 aaKnown RBP17.66■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Sh3bgrQ9WUZ7 214 aa17.66■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Pitpnm2Q6ZPQ6 1335 aa17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 CnpP16330 420 aa17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Mdh1bQ5F204 500 aa17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Rnf214Q8BFU3 668 aaKnown RBP17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Hps3Q91VB4 1002 aa17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Styxl1Q9DAR2 321 aa17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Acot9Q9R0X4 439 aaKnown RBP17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Myh14Q6URW6 2000 aa17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Mctp1E9PV86 951 aa17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 LdhaP06151 332 aaKnown RBP17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Tbc1d9bQ5SVR0 1263 aa17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Fam196bQ6GQV1 535 aa17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 E4f1Q8CCE9 783 aa17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Dnttip2Q8R2M2 758 aaKnown RBP17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Borcs6Q9D6W8 360 aa17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Tjap1Q9DCD5 539 aa17.65■□□□□ 0.42
Ldb3-208ENSMUST00000228044 Nfil3O08750 462 aa17.64■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Eif6O55135 245 aa17.64■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Grm4Q68EF4 912 aa17.64■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Pcdhb14Q6PB90 796 aa17.64■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Zbtb39Q6PDK0 712 aa17.64■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Ttll1Q91V51 423 aa17.64■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Hdac9Q99N13 588 aa17.64■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Klf15Q9EPW2 415 aa17.64■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Tfap4Q9JIZ5 338 aa17.64■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Cd2apQ9JLQ0 637 aa17.64■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Add3Q9QYB5 706 aaKnown RBP17.64■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Ktn1Q61595 1327 aaKnown RBP17.63■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Sema3fO88632 785 aa17.63■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Nedd4P46935 887 aaKnown RBP17.63■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Cyp7b1Q60991 507 aa17.63■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Tcp11l1Q8BTG3 509 aa17.63■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Trim11Q99PQ2 467 aa17.63■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Psmd10Q9Z2X2 231 aa17.63■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Fam184aE9PW83 1143 aa17.63■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Rrp1P56183 494 aaKnown RBP17.63■□□□□ 0.41
Ldb3-208ENSMUST00000228044 WaplQ65Z40 1200 aaKnown RBP17.63■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Ift74Q8BKE9 600 aa17.63■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Camkk2Q8C078 588 aa17.63■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Tmem79Q9D709 391 aa17.63■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Col1a1P11087 1453 aa17.62■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Cfap73J3QPZ5 306 aa17.62■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Mboat4P0C7A3 435 aa17.62■□□□□ 0.41
Ldb3-208ENSMUST00000228044 DSCC1Q14AI0 399 aa17.62■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Map3k9Q3U1V8 1077 aa17.62■□□□□ 0.41
Ldb3-208ENSMUST00000228044 PRAG1Q571I4 1179 aa17.62■□□□□ 0.41
Ldb3-208ENSMUST00000228044 PsdQ5DTT2 1024 aa17.62■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Brip1Q5SXJ3 1174 aa17.62■□□□□ 0.41
Ldb3-208ENSMUST00000228044 B4galnt4Q766D5 1034 aa17.62■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Chd1lQ9CXF7 900 aa17.62■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Mei1Q9D4I2 1268 aa17.62■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Ubxn8Q9QZ49 277 aa17.62■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Usp21Q9QZL6 566 aa17.62■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Tyro3P55144 880 aa17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Pfkfb1P70266 471 aa17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Vil1Q62468 827 aa17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Snx13Q6PHS6 957 aa17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Hook1Q8BIL5 728 aa17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Hnrnpul1Q8VDM6 859 aaKnown RBP17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Pcdhb15Q91Y04 786 aa17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Gm30191A0A0U1RNT7 187 aa17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Phldb3E9QAF4 648 aa17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Mybl2P48972 704 aa17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Usp25P57080 1055 aa17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Haus7Q8BKT8 364 aa17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Smc2Q8CG48 1191 aaKnown RBP17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Dusp10Q9ESS0 483 aa17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Hic2Q9JLZ6 619 aaKnown RBP17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 SmapQ9R0P4 181 aaKnown RBP17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Gm5114W4VSN8 858 aa17.61■□□□□ 0.41
Ldb3-208ENSMUST00000228044 Tspoap1Q7TNF8 1846 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms