RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Stx8O88983 236 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Gxylt1Q3UHH8 404 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Thrap3Q569Z6 951 aaKnown RBP16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Prkag3Q8BGM7 489 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Hook1Q8BIL5 728 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Rps6ka5Q8C050 863 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Gtf3c5Q8R2T8 520 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Rbm10Q99KG3 930 aaKnown RBP16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Akap8Q9DBR0 687 aaKnown RBP16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Telo2Q9DC40 840 aaKnown RBP16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Col4a3bpQ9EQG9 624 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Tulp1Q9Z273 543 aa16.45■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Tspoap1Q7TNF8 1846 aa16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Zscan20B2KFW1 1030 aa16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 D830030K20RikE9PYQ5 218 aa16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Gm3043K7N693 218 aa16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Gm16440K7N6G6 218 aa16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Gm2244L7N2A3 218 aa16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Gm3278L7N2D2 218 aa16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Gm8271L7N2E2 218 aa16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Myl3P09542 204 aa16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Nedd4P46935 887 aaKnown RBP16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Bach1P97302 739 aa16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Gm28047Q3US59 414 aa16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Usp50Q6P8X6 390 aa16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Acnat2Q8BGG9 420 aa16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Inpp5bQ8K337 993 aa16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Tmem47Q9JJG6 181 aa16.44■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Ccdc88aQ5SNZ0 1873 aa16.43■□□□□ 0.22
Ssr1-204ENSMUST00000225319 GnaqP21279 359 aa16.43■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Dnm1P39053 867 aa16.43■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Nap1l2P51860 460 aa16.43■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Slc27a1Q60714 646 aa16.43■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Vil1Q62468 827 aa16.43■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Vps37dQ810I0 261 aa16.43■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Q8K2W9 541 aa16.43■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Ubac1Q8VDI7 409 aa16.43■□□□□ 0.22
Ssr1-204ENSMUST00000225319 AllcQ9JHX6 414 aa16.43■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Tob2Q9JM55 345 aa16.43■□□□□ 0.22
Ssr1-204ENSMUST00000225319 DmtnQ9WV69 405 aa16.43■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Ythdc1E9Q5K9 736 aaKnown RBP16.42■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Cyp3a25O09158 503 aa16.42■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Slc27a3O88561 667 aa16.42■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Ptgs1P22437 602 aa16.42■□□□□ 0.22
Ssr1-204ENSMUST00000225319 1700013D24RikQ0P521 120 aa16.42■□□□□ 0.22
Ssr1-204ENSMUST00000225319 KhnynQ80U38 671 aa16.42■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Spire2Q8K1S6 718 aa16.42■□□□□ 0.22
Ssr1-204ENSMUST00000225319 CerkQ8K4Q7 531 aa16.42■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Ccer1Q9CQL2 403 aa16.42■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Yeats4Q9CR11 227 aaKnown RBP16.42■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Myh14Q6URW6 2000 aa16.42■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Kansl3A2RSY1 903 aaKnown RBP16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Cavin1O54724 392 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Magea6O89010 325 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 RdxP26043 583 aaKnown RBP16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Mmp14P53690 582 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 TrhQ62361 256 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Magea3Q6T340 320 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Tacc1Q6Y685 774 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Rbm28Q8CGC6 750 aaKnown RBP16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Mtmr4Q91XS1 1190 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Nop2Q922K7 793 aaKnown RBP16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Hdac9Q99N13 588 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Pitpnm2Q6ZPQ6 1335 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 A0A1Y7VML8 143 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 1700003F12RikA2AKE5 210 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Flvcr1B2RXV4 560 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Alppl2P24823 529 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Cplx1P63040 134 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 NynrinQ5DTZ0 1840 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Lca5Q80ST9 704 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 NrapQ80XB4 1728 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Tsen34Q8BMZ5 316 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 PaoxQ8C0L6 504 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 RadxQ8C779 850 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Lzts2Q91YU6 671 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Grpel1Q99LP6 217 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Snw1Q9CSN1 536 aaKnown RBP16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Borcs6Q9D6W8 360 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Usp21Q9QZL6 566 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Gpaa1Q9WTK3 621 aa16.41■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Lbhd1A0A087WPA0 259 aa16.4■□□□□ 0.22
Ssr1-204ENSMUST00000225319 CnpP16330 420 aa16.4■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Cacnb3P54285 484 aa16.4■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Triml1Q8BVP1 470 aa16.4■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Ppm1fQ8CGA0 452 aa16.4■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Mrps5Q99N87 432 aaKnown RBP16.4■□□□□ 0.22
Ssr1-204ENSMUST00000225319 NenfQ9CQ45 171 aa16.4■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Trmt112Q9DCG9 125 aa16.4■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Pik3ap1Q9EQ32 811 aa16.4■□□□□ 0.22
Ssr1-204ENSMUST00000225319 Pfkfb3A7UAK5 555 aa16.39■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Stag2O35638 1231 aa16.39■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Usp5P56399 858 aaKnown RBP16.39■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Epha2Q03145 977 aa16.39■□□□□ 0.21
Ssr1-204ENSMUST00000225319 PsdQ5DTT2 1024 aa16.39■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Dpp8Q80YA7 892 aa16.39■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Ppp1r11Q8K1L5 131 aa16.39■□□□□ 0.21
Ssr1-204ENSMUST00000225319 SmapQ9R0P4 181 aaKnown RBP16.39■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Kcnj14Q8JZN3 434 aa16.38■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Stk38Q91VJ4 465 aa16.38■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms